Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 AC159203.2-201ENSMUST00000221326 193 ntBASIC3.9□□□□□ -1.79
Vps53Q8CCB4 Lrrd1-201ENSMUST00000044039 2951 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
Vps53Q8CCB4 Gm23741-201ENSMUST00000097237 171 ntBASIC3.9□□□□□ -1.79
Vps53Q8CCB4 Olfr397-204ENSMUST00000216291 4168 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
Vps53Q8CCB4 Gm44846-201ENSMUST00000207127 3243 ntBASIC3.9□□□□□ -1.79
Vps53Q8CCB4 Olfr1354-203ENSMUST00000217073 3792 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.79
Vps53Q8CCB4 Olfr913-201ENSMUST00000081095 2441 ntAPPRIS P1 TSL 3 BASIC3.9□□□□□ -1.79
Vps53Q8CCB4 Dmd-203ENSMUST00000114000 14910 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Vps53Q8CCB4 Mcmdc2-203ENSMUST00000125294 2003 ntTSL 5 BASIC3.89□□□□□ -1.79
Vps53Q8CCB4 Wfdc18-201ENSMUST00000001009 521 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Vps53Q8CCB4 Gm24118-201ENSMUST00000103972 126 ntBASIC3.89□□□□□ -1.79
Vps53Q8CCB4 Gm14823-201ENSMUST00000117698 238 ntBASIC3.89□□□□□ -1.79
Vps53Q8CCB4 Gm12025-201ENSMUST00000117768 144 ntBASIC3.89□□□□□ -1.79
Vps53Q8CCB4 Gm24385-201ENSMUST00000122694 350 ntBASIC3.89□□□□□ -1.79
Vps53Q8CCB4 Gm13942-201ENSMUST00000136950 325 ntTSL 3 BASIC3.89□□□□□ -1.79
Vps53Q8CCB4 Mir5099-201ENSMUST00000175257 74 ntBASIC3.89□□□□□ -1.79
Vps53Q8CCB4 Gm21978-201ENSMUST00000179696 377 ntBASIC3.89□□□□□ -1.79
Vps53Q8CCB4 Gm26180-201ENSMUST00000179942 107 ntBASIC3.89□□□□□ -1.79
Vps53Q8CCB4 Gm31415-201ENSMUST00000194963 344 ntTSL 5 BASIC3.89□□□□□ -1.79
Vps53Q8CCB4 Zfp813-ps-202ENSMUST00000204773 618 ntTSL 5 BASIC3.89□□□□□ -1.79
Vps53Q8CCB4 Gm11213-202ENSMUST00000210529 524 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Vps53Q8CCB4 Gm7948-201ENSMUST00000212607 844 ntBASIC3.89□□□□□ -1.79
Vps53Q8CCB4 Gm45860-201ENSMUST00000212700 334 ntBASIC3.89□□□□□ -1.79
Vps53Q8CCB4 Gm35190-201ENSMUST00000222335 526 ntTSL 3 BASIC3.89□□□□□ -1.79
Vps53Q8CCB4 AC117588.2-201ENSMUST00000228340 311 ntBASIC3.89□□□□□ -1.79
Vps53Q8CCB4 Gm4987-201ENSMUST00000078326 408 ntBASIC3.89□□□□□ -1.79
Vps53Q8CCB4 Smcp-201ENSMUST00000098888 861 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Vps53Q8CCB4 Vmn1r89-208ENSMUST00000228587 2061 ntAPPRIS P2 BASIC3.89□□□□□ -1.79
Vps53Q8CCB4 Olfr298-203ENSMUST00000216968 3451 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Vps53Q8CCB4 Gm3259-201ENSMUST00000101015 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.89□□□□□ -1.79
Vps53Q8CCB4 Olfr1404-202ENSMUST00000216556 3305 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Vps53Q8CCB4 Gm6325-201ENSMUST00000122015 3114 ntBASIC3.88□□□□□ -1.79
Vps53Q8CCB4 Gm38286-201ENSMUST00000195128 3105 ntBASIC3.88□□□□□ -1.79
Vps53Q8CCB4 Mannr-201ENSMUST00000193549 1438 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
Vps53Q8CCB4 Trbv16-201ENSMUST00000103274 398 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
Vps53Q8CCB4 Gm23747-201ENSMUST00000104228 131 ntBASIC3.88□□□□□ -1.79
Vps53Q8CCB4 Gm14622-201ENSMUST00000117117 468 ntBASIC3.88□□□□□ -1.79
Vps53Q8CCB4 Gm13167-201ENSMUST00000118554 578 ntBASIC3.88□□□□□ -1.79
Vps53Q8CCB4 Gm14254-201ENSMUST00000136371 296 ntTSL 5 BASIC3.88□□□□□ -1.79
Vps53Q8CCB4 Gm25621-201ENSMUST00000157223 114 ntBASIC3.88□□□□□ -1.79
Vps53Q8CCB4 4930505G20Rik-201ENSMUST00000176582 561 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
Vps53Q8CCB4 Gm23660-201ENSMUST00000178362 79 ntBASIC3.88□□□□□ -1.79
Vps53Q8CCB4 Gm24088-201ENSMUST00000179100 79 ntBASIC3.88□□□□□ -1.79
Vps53Q8CCB4 Mir7k-201ENSMUST00000184115 110 ntBASIC3.88□□□□□ -1.79
Vps53Q8CCB4 Tprkb-214ENSMUST00000202803 716 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
Vps53Q8CCB4 Gm44794-201ENSMUST00000206550 411 ntBASIC3.88□□□□□ -1.79
Vps53Q8CCB4 5430401H09Rik-201ENSMUST00000218145 1076 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
Vps53Q8CCB4 Snord35b-201ENSMUST00000082833 87 ntBASIC3.88□□□□□ -1.79
Vps53Q8CCB4 Gm23932-201ENSMUST00000082914 107 ntBASIC3.88□□□□□ -1.79
Vps53Q8CCB4 Gm23851-201ENSMUST00000083831 103 ntBASIC3.88□□□□□ -1.79
Vps53Q8CCB4 Vmn1r86-201ENSMUST00000094828 951 ntAPPRIS P2 BASIC3.88□□□□□ -1.79
Vps53Q8CCB4 Olfr1309-202ENSMUST00000214537 4274 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Vps53Q8CCB4 Gm14390-201ENSMUST00000117505 1695 ntBASIC3.87□□□□□ -1.79
Vps53Q8CCB4 Olfr918-202ENSMUST00000215461 3783 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
Vps53Q8CCB4 Gm14429-201ENSMUST00000121881 2024 ntBASIC3.87□□□□□ -1.79
Vps53Q8CCB4 Gm3788-201ENSMUST00000119949 136 ntBASIC3.87□□□□□ -1.79
Vps53Q8CCB4 Gm14972-201ENSMUST00000121780 364 ntBASIC3.87□□□□□ -1.79
Vps53Q8CCB4 Scgb1b26-ps-201ENSMUST00000121845 291 ntBASIC3.87□□□□□ -1.79
Vps53Q8CCB4 Gm14694-201ENSMUST00000121856 282 ntBASIC3.87□□□□□ -1.79
Vps53Q8CCB4 n-R5s80-201ENSMUST00000122596 111 ntBASIC3.87□□□□□ -1.79
Vps53Q8CCB4 Gm23671-201ENSMUST00000157472 103 ntBASIC3.87□□□□□ -1.79
Vps53Q8CCB4 Gm24847-201ENSMUST00000158032 108 ntBASIC3.87□□□□□ -1.79
Vps53Q8CCB4 Gm21797-201ENSMUST00000177579 543 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
Vps53Q8CCB4 Gm21767-201ENSMUST00000178689 543 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
Vps53Q8CCB4 Gm21822-201ENSMUST00000179302 543 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
Vps53Q8CCB4 Gm27477-201ENSMUST00000184649 143 ntBASIC3.87□□□□□ -1.79
Vps53Q8CCB4 Mir6372-201ENSMUST00000185114 109 ntBASIC3.87□□□□□ -1.79
Vps53Q8CCB4 Gm29104-201ENSMUST00000186304 222 ntBASIC3.87□□□□□ -1.79
Vps53Q8CCB4 1700063A18Rik-201ENSMUST00000190901 356 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
Vps53Q8CCB4 Gm18956-201ENSMUST00000192857 480 ntBASIC3.87□□□□□ -1.79
Vps53Q8CCB4 Olfr428-ps1-201ENSMUST00000201135 466 ntBASIC3.87□□□□□ -1.79
Vps53Q8CCB4 Vmn1r-ps13-201ENSMUST00000204697 134 ntBASIC3.87□□□□□ -1.79
Vps53Q8CCB4 Gm18423-201ENSMUST00000205144 1074 ntBASIC3.87□□□□□ -1.79
Vps53Q8CCB4 Gm44208-201ENSMUST00000205199 421 ntBASIC3.87□□□□□ -1.79
Vps53Q8CCB4 Olfr192-203ENSMUST00000206214 1054 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
Vps53Q8CCB4 Ccdc73-201ENSMUST00000111114 3944 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
Vps53Q8CCB4 Gm43256-201ENSMUST00000199995 3091 ntBASIC3.87□□□□□ -1.79
Vps53Q8CCB4 Gm42536-201ENSMUST00000197562 1613 ntBASIC3.87□□□□□ -1.79
Vps53Q8CCB4 Olfr729-203ENSMUST00000215327 4220 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
Vps53Q8CCB4 Olfr729-204ENSMUST00000215451 4236 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
Vps53Q8CCB4 D930036K23Rik-201ENSMUST00000191894 3964 ntBASIC3.87□□□□□ -1.79
Vps53Q8CCB4 Olfr364-ps1-203ENSMUST00000217298 2894 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
Vps53Q8CCB4 Gm42524-201ENSMUST00000202881 2214 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
Vps53Q8CCB4 Vmn2r37-201ENSMUST00000072787 3081 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
Vps53Q8CCB4 Ighv15-2-201ENSMUST00000103497 351 ntAPPRIS ALT2 BASIC3.86□□□□□ -1.79
Vps53Q8CCB4 Gm22936-201ENSMUST00000103955 126 ntBASIC3.86□□□□□ -1.79
Vps53Q8CCB4 Gm12805-201ENSMUST00000117305 1048 ntBASIC3.86□□□□□ -1.79
Vps53Q8CCB4 Gm12137-201ENSMUST00000119565 346 ntBASIC3.86□□□□□ -1.79
Vps53Q8CCB4 Gm14852-201ENSMUST00000120065 647 ntBASIC3.86□□□□□ -1.79
Vps53Q8CCB4 Gm13692-201ENSMUST00000120774 371 ntBASIC3.86□□□□□ -1.79
Vps53Q8CCB4 Gm15142-201ENSMUST00000121013 856 ntBASIC3.86□□□□□ -1.79
Vps53Q8CCB4 Gm24936-201ENSMUST00000122598 247 ntBASIC3.86□□□□□ -1.79
Vps53Q8CCB4 Gm26020-201ENSMUST00000122729 183 ntBASIC3.86□□□□□ -1.79
Vps53Q8CCB4 Prlr-205ENSMUST00000128921 3836 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
Vps53Q8CCB4 Gm8121-201ENSMUST00000153583 499 ntBASIC3.86□□□□□ -1.79
Vps53Q8CCB4 Gm25624-201ENSMUST00000157222 275 ntBASIC3.86□□□□□ -1.79
Vps53Q8CCB4 Ear10-201ENSMUST00000159175 678 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
Vps53Q8CCB4 Gm17196-201ENSMUST00000164074 345 ntTSL 5 BASIC3.86□□□□□ -1.79
Vps53Q8CCB4 Tcrg-C3-201ENSMUST00000164407 519 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
Vps53Q8CCB4 Gm26866-201ENSMUST00000180414 802 ntBASIC3.86□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms