Protein–RNA interactions for Protein: Q8C9S8

Atg4a, Cysteine protease ATG4A, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4aQ8C9S8 Mir3965-201ENSMUST00000175570 69 ntBASIC3.17□□□□□ -1.9
Atg4aQ8C9S8 Vmn1r-ps9-201ENSMUST00000177047 358 ntBASIC3.17□□□□□ -1.9
Atg4aQ8C9S8 Gm20832-201ENSMUST00000189076 665 ntBASIC3.17□□□□□ -1.9
Atg4aQ8C9S8 Gm28779-201ENSMUST00000189678 323 ntBASIC3.17□□□□□ -1.9
Atg4aQ8C9S8 Gm28241-201ENSMUST00000190916 235 ntBASIC3.17□□□□□ -1.9
Atg4aQ8C9S8 Gm28271-201ENSMUST00000191369 351 ntTSL 3 BASIC3.17□□□□□ -1.9
Atg4aQ8C9S8 Gm30638-201ENSMUST00000195570 656 ntBASIC3.17□□□□□ -1.9
Atg4aQ8C9S8 Gm36728-201ENSMUST00000195782 665 ntBASIC3.17□□□□□ -1.9
Atg4aQ8C9S8 Olfr1401-ps1-201ENSMUST00000202296 211 ntBASIC3.17□□□□□ -1.9
Atg4aQ8C9S8 Gm44060-201ENSMUST00000204440 410 ntBASIC3.17□□□□□ -1.9
Atg4aQ8C9S8 Gm7039-201ENSMUST00000205138 346 ntBASIC3.17□□□□□ -1.9
Atg4aQ8C9S8 Gm44961-201ENSMUST00000207450 196 ntBASIC3.17□□□□□ -1.9
Atg4aQ8C9S8 AC161572.1-201ENSMUST00000227486 640 ntBASIC3.17□□□□□ -1.9
Atg4aQ8C9S8 Gm10025-201ENSMUST00000079568 372 ntBASIC3.17□□□□□ -1.9
Atg4aQ8C9S8 n-R5s40-201ENSMUST00000082475 124 ntBASIC3.17□□□□□ -1.9
Atg4aQ8C9S8 Gm23093-201ENSMUST00000083450 102 ntBASIC3.17□□□□□ -1.9
Atg4aQ8C9S8 Gm23847-201ENSMUST00000083829 110 ntBASIC3.17□□□□□ -1.9
Atg4aQ8C9S8 Gm8074-201ENSMUST00000095071 252 ntBASIC3.17□□□□□ -1.9
Atg4aQ8C9S8 Olfr1314-202ENSMUST00000207976 2976 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Atg4aQ8C9S8 Olfr1245-202ENSMUST00000217402 2610 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Atg4aQ8C9S8 Ssxb8-201ENSMUST00000101690 518 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Atg4aQ8C9S8 Mir92-1-201ENSMUST00000102108 80 ntBASIC3.16□□□□□ -1.9
Atg4aQ8C9S8 Gm14657-201ENSMUST00000117461 302 ntBASIC3.16□□□□□ -1.9
Atg4aQ8C9S8 Gm9043-201ENSMUST00000119677 314 ntBASIC3.16□□□□□ -1.9
Atg4aQ8C9S8 Gm13339-201ENSMUST00000120651 510 ntBASIC3.16□□□□□ -1.9
Atg4aQ8C9S8 Gm13511-201ENSMUST00000121167 363 ntBASIC3.16□□□□□ -1.9
Atg4aQ8C9S8 1700119I11Rik-201ENSMUST00000122270 336 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
Atg4aQ8C9S8 Gm13431-201ENSMUST00000122948 476 ntTSL 2 BASIC3.16□□□□□ -1.9
Atg4aQ8C9S8 Nron-204ENSMUST00000158971 370 ntBASIC3.16□□□□□ -1.9
Atg4aQ8C9S8 Ranbp2-ps9-201ENSMUST00000184566 382 ntBASIC3.16□□□□□ -1.9
Atg4aQ8C9S8 Gm27588-201ENSMUST00000185096 263 ntBASIC3.16□□□□□ -1.9
Atg4aQ8C9S8 Gm21673-201ENSMUST00000186640 436 ntBASIC3.16□□□□□ -1.9
Atg4aQ8C9S8 4930554C24Rik-201ENSMUST00000187735 1084 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
Atg4aQ8C9S8 Gm19641-201ENSMUST00000188432 417 ntBASIC3.16□□□□□ -1.9
Atg4aQ8C9S8 Gm21135-201ENSMUST00000189023 436 ntBASIC3.16□□□□□ -1.9
Atg4aQ8C9S8 Gm28155-201ENSMUST00000191066 151 ntBASIC3.16□□□□□ -1.9
Atg4aQ8C9S8 Gm43264-201ENSMUST00000202284 325 ntBASIC3.16□□□□□ -1.9
Atg4aQ8C9S8 Gm5322-201ENSMUST00000206142 699 ntBASIC3.16□□□□□ -1.9
Atg4aQ8C9S8 Gm45430-201ENSMUST00000211276 260 ntTSL 5 BASIC3.16□□□□□ -1.9
Atg4aQ8C9S8 CAAA01090811.1-201ENSMUST00000216828 277 ntBASIC3.16□□□□□ -1.9
Atg4aQ8C9S8 AC116589.3-202ENSMUST00000221770 649 ntBASIC3.16□□□□□ -1.9
Atg4aQ8C9S8 AC116589.6-201ENSMUST00000222252 649 ntBASIC3.16□□□□□ -1.9
Atg4aQ8C9S8 Gm16368-201ENSMUST00000222340 435 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Atg4aQ8C9S8 Gm46367-202ENSMUST00000222771 501 ntTSL 5 BASIC3.16□□□□□ -1.9
Atg4aQ8C9S8 AC098719.1-201ENSMUST00000228920 371 ntBASIC3.16□□□□□ -1.9
Atg4aQ8C9S8 Defb11-201ENSMUST00000051965 317 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Atg4aQ8C9S8 Gm25853-201ENSMUST00000082793 132 ntBASIC3.16□□□□□ -1.9
Atg4aQ8C9S8 Gm17969-201ENSMUST00000185706 2557 ntBASIC3.16□□□□□ -1.9
Atg4aQ8C9S8 Gm13136-201ENSMUST00000121031 2950 ntBASIC3.16□□□□□ -1.9
Atg4aQ8C9S8 AC117199.1-201ENSMUST00000219940 3132 ntBASIC3.16□□□□□ -1.9
Atg4aQ8C9S8 Olfr1129-202ENSMUST00000213315 2255 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
Atg4aQ8C9S8 Vmn2r-ps46-201ENSMUST00000172969 2556 ntBASIC3.15□□□□□ -1.9
Atg4aQ8C9S8 AC116557.1-201ENSMUST00000219494 1521 ntBASIC3.15□□□□□ -1.9
Atg4aQ8C9S8 Gm22834-201ENSMUST00000102021 79 ntBASIC3.15□□□□□ -1.91
Atg4aQ8C9S8 Gm24122-201ENSMUST00000104107 132 ntBASIC3.15□□□□□ -1.91
Atg4aQ8C9S8 Mir669d-2-201ENSMUST00000116854 86 ntBASIC3.15□□□□□ -1.91
Atg4aQ8C9S8 Gm12806-201ENSMUST00000119384 268 ntBASIC3.15□□□□□ -1.91
Atg4aQ8C9S8 Gm15669-201ENSMUST00000147834 526 ntTSL 3 BASIC3.15□□□□□ -1.91
Atg4aQ8C9S8 Gm13775-201ENSMUST00000153865 751 ntTSL 3 BASIC3.15□□□□□ -1.91
Atg4aQ8C9S8 Gm25621-201ENSMUST00000157223 114 ntBASIC3.15□□□□□ -1.91
Atg4aQ8C9S8 Gm23600-201ENSMUST00000157260 71 ntBASIC3.15□□□□□ -1.91
Atg4aQ8C9S8 Gm24958-201ENSMUST00000158009 97 ntBASIC3.15□□□□□ -1.91
Atg4aQ8C9S8 Olfr733-201ENSMUST00000163469 994 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Atg4aQ8C9S8 Pate1-201ENSMUST00000170021 389 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
Atg4aQ8C9S8 Gm24518-201ENSMUST00000180275 94 ntBASIC3.15□□□□□ -1.91
Atg4aQ8C9S8 Gm27999-201ENSMUST00000183539 193 ntBASIC3.15□□□□□ -1.91
Atg4aQ8C9S8 Sumo1-203ENSMUST00000185265 532 ntTSL 3 BASIC3.15□□□□□ -1.91
Atg4aQ8C9S8 Hmgb1-rs16-201ENSMUST00000185927 613 ntBASIC3.15□□□□□ -1.91
Atg4aQ8C9S8 Gm37279-201ENSMUST00000194630 338 ntTSL 5 BASIC3.15□□□□□ -1.91
Atg4aQ8C9S8 Trav14-1-201ENSMUST00000198297 399 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Atg4aQ8C9S8 Gm18423-201ENSMUST00000205144 1074 ntBASIC3.15□□□□□ -1.91
Atg4aQ8C9S8 Gm44903-201ENSMUST00000206840 130 ntBASIC3.15□□□□□ -1.91
Atg4aQ8C9S8 Gm45678-201ENSMUST00000210509 295 ntBASIC3.15□□□□□ -1.91
Atg4aQ8C9S8 Gm30674-201ENSMUST00000214523 392 ntBASIC3.15□□□□□ -1.91
Atg4aQ8C9S8 CAAA01090905.1-201ENSMUST00000219056 426 ntTSL 2 BASIC3.15□□□□□ -1.91
Atg4aQ8C9S8 Gm16419-201ENSMUST00000221057 625 ntBASIC3.15□□□□□ -1.91
Atg4aQ8C9S8 Olfr235-201ENSMUST00000073507 1079 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Atg4aQ8C9S8 AC154386.1-201ENSMUST00000222753 2871 ntBASIC3.14□□□□□ -1.91
Atg4aQ8C9S8 Olfr1225-202ENSMUST00000216961 3231 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Atg4aQ8C9S8 Gm43256-201ENSMUST00000199995 3091 ntBASIC3.14□□□□□ -1.91
Atg4aQ8C9S8 Zfp97-201ENSMUST00000147630 2684 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
Atg4aQ8C9S8 Gm14415-201ENSMUST00000118260 1578 ntBASIC3.14□□□□□ -1.91
Atg4aQ8C9S8 Olfr355-202ENSMUST00000213574 3610 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Atg4aQ8C9S8 Zfp971-202ENSMUST00000108926 1413 ntAPPRIS P1 TSL 3 BASIC3.14□□□□□ -1.91
Atg4aQ8C9S8 Ccdc7b-201ENSMUST00000026912 1447 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Atg4aQ8C9S8 Gm24096-201ENSMUST00000103905 110 ntBASIC3.14□□□□□ -1.91
Atg4aQ8C9S8 Gm24670-201ENSMUST00000104154 132 ntBASIC3.14□□□□□ -1.91
Atg4aQ8C9S8 Gm26247-201ENSMUST00000116702 91 ntBASIC3.14□□□□□ -1.91
Atg4aQ8C9S8 Gm14100-201ENSMUST00000125575 651 ntTSL 3 BASIC3.14□□□□□ -1.91
Atg4aQ8C9S8 Gm24436-201ENSMUST00000157889 302 ntBASIC3.14□□□□□ -1.91
Atg4aQ8C9S8 Gm22836-201ENSMUST00000158441 61 ntBASIC3.14□□□□□ -1.91
Atg4aQ8C9S8 Gm16043-201ENSMUST00000160030 616 ntTSL 3 BASIC3.14□□□□□ -1.91
Atg4aQ8C9S8 Gm17162-201ENSMUST00000168538 473 ntBASIC3.14□□□□□ -1.91
Atg4aQ8C9S8 Klra5-204ENSMUST00000169901 792 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
Atg4aQ8C9S8 Mir5129-201ENSMUST00000174938 78 ntBASIC3.14□□□□□ -1.91
Atg4aQ8C9S8 Gm21518-201ENSMUST00000178115 567 ntTSL 5 BASIC3.14□□□□□ -1.91
Atg4aQ8C9S8 Gm20736-201ENSMUST00000178198 567 ntTSL 5 BASIC3.14□□□□□ -1.91
Atg4aQ8C9S8 Gm20843-201ENSMUST00000178505 567 ntTSL 5 BASIC3.14□□□□□ -1.91
Atg4aQ8C9S8 Gm21209-201ENSMUST00000178556 567 ntTSL 5 BASIC3.14□□□□□ -1.91
Atg4aQ8C9S8 Gm24019-201ENSMUST00000178620 107 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 82.4 ms