Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Gm10964-201ENSMUST00000106852 120 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
Trim47Q8C0E3 Gm12719-201ENSMUST00000118859 241 ntBASIC4.91□□□□□ -1.62
Trim47Q8C0E3 Nectin3-206ENSMUST00000121803 541 ntTSL 2 BASIC4.91□□□□□ -1.62
Trim47Q8C0E3 Gm13092-201ENSMUST00000136346 260 ntBASIC4.91□□□□□ -1.62
Trim47Q8C0E3 Gm16354-201ENSMUST00000155376 150 ntBASIC4.91□□□□□ -1.62
Trim47Q8C0E3 Gm26275-201ENSMUST00000157101 268 ntBASIC4.91□□□□□ -1.62
Trim47Q8C0E3 Gm24666-201ENSMUST00000158937 167 ntBASIC4.91□□□□□ -1.62
Trim47Q8C0E3 Ubl5-209ENSMUST00000161882 489 ntTSL 3 BASIC4.91□□□□□ -1.62
Trim47Q8C0E3 Gm24084-201ENSMUST00000175173 137 ntBASIC4.91□□□□□ -1.62
Trim47Q8C0E3 Gm2004-203ENSMUST00000179349 195 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Trim47Q8C0E3 Mir6335-201ENSMUST00000184081 98 ntBASIC4.91□□□□□ -1.62
Trim47Q8C0E3 Mir3620-201ENSMUST00000184710 61 ntBASIC4.91□□□□□ -1.62
Trim47Q8C0E3 Gm42830-201ENSMUST00000196642 313 ntBASIC4.91□□□□□ -1.62
Trim47Q8C0E3 Gm45860-201ENSMUST00000212700 334 ntBASIC4.91□□□□□ -1.62
Trim47Q8C0E3 Gm3333-201ENSMUST00000221637 452 ntTSL 5 BASIC4.91□□□□□ -1.62
Trim47Q8C0E3 Gm24762-201ENSMUST00000083689 104 ntBASIC4.91□□□□□ -1.62
Trim47Q8C0E3 Gm10491-201ENSMUST00000085330 117 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
Trim47Q8C0E3 Gm3972-201ENSMUST00000173960 2861 ntBASIC4.91□□□□□ -1.62
Trim47Q8C0E3 Bmp15-201ENSMUST00000024049 3060 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Trim47Q8C0E3 Phf11c-201ENSMUST00000166912 3459 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Trim47Q8C0E3 Gm20139-202ENSMUST00000216041 3888 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Trim47Q8C0E3 Vmn2r26-201ENSMUST00000032238 2568 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Trim47Q8C0E3 Gm43260-201ENSMUST00000197378 2430 ntBASIC4.91□□□□□ -1.62
Trim47Q8C0E3 Gm13972-201ENSMUST00000153726 3164 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
Trim47Q8C0E3 Ccser2-201ENSMUST00000067700 7334 ntTSL 5 BASIC4.9□□□□□ -1.62
Trim47Q8C0E3 Olfr699-203ENSMUST00000216307 4193 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
Trim47Q8C0E3 Ogt-201ENSMUST00000044475 5384 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.62
Trim47Q8C0E3 Usp9x-201ENSMUST00000089302 11887 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
Trim47Q8C0E3 Gm25726-201ENSMUST00000104529 129 ntBASIC4.9□□□□□ -1.63
Trim47Q8C0E3 Gm15183-201ENSMUST00000118933 348 ntBASIC4.9□□□□□ -1.63
Trim47Q8C0E3 Gm15537-201ENSMUST00000126677 485 ntTSL 2 BASIC4.9□□□□□ -1.63
Trim47Q8C0E3 Gm10059-201ENSMUST00000131139 171 ntBASIC4.9□□□□□ -1.63
Trim47Q8C0E3 AI847159-204ENSMUST00000148997 753 ntTSL 3 BASIC4.9□□□□□ -1.63
Trim47Q8C0E3 Rpl31-ps24-201ENSMUST00000181350 379 ntBASIC4.9□□□□□ -1.63
Trim47Q8C0E3 Gm27761-201ENSMUST00000184091 131 ntBASIC4.9□□□□□ -1.63
Trim47Q8C0E3 Mir6372-201ENSMUST00000185114 109 ntBASIC4.9□□□□□ -1.63
Trim47Q8C0E3 Gm29218-205ENSMUST00000190846 615 ntBASIC4.9□□□□□ -1.63
Trim47Q8C0E3 Gm43602-201ENSMUST00000196772 300 ntBASIC4.9□□□□□ -1.63
Trim47Q8C0E3 AC133189.1-201ENSMUST00000198820 140 ntBASIC4.9□□□□□ -1.63
Trim47Q8C0E3 Gm44145-201ENSMUST00000203711 172 ntTSL 3 BASIC4.9□□□□□ -1.63
Trim47Q8C0E3 Gm44389-201ENSMUST00000203795 182 ntBASIC4.9□□□□□ -1.63
Trim47Q8C0E3 AC183096.1-201ENSMUST00000226392 130 ntBASIC4.9□□□□□ -1.63
Trim47Q8C0E3 Kcnt2-201ENSMUST00000119786 3624 ntTSL 5 BASIC4.9□□□□□ -1.63
Trim47Q8C0E3 Agbl1-201ENSMUST00000026854 3452 ntAPPRIS ALT2 TSL 2 BASIC4.9□□□□□ -1.63
Trim47Q8C0E3 Gm42946-201ENSMUST00000196108 2570 ntBASIC4.9□□□□□ -1.63
Trim47Q8C0E3 Cp-203ENSMUST00000108325 3183 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
Trim47Q8C0E3 Abi3bp-203ENSMUST00000096013 4495 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
Trim47Q8C0E3 Slc5a12-201ENSMUST00000045972 3529 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Trim47Q8C0E3 Olfr1297-202ENSMUST00000213398 6998 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
Trim47Q8C0E3 Btbd35f28-201ENSMUST00000105015 1960 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
Trim47Q8C0E3 Btbd35f18-201ENSMUST00000105019 1960 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
Trim47Q8C0E3 Btbd35f11-201ENSMUST00000105020 1960 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
Trim47Q8C0E3 Synpr-207ENSMUST00000223583 3362 ntBASIC4.89□□□□□ -1.63
Trim47Q8C0E3 Ulbp1-203ENSMUST00000218087 5959 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
Trim47Q8C0E3 Gm45211-201ENSMUST00000206208 2650 ntBASIC4.89□□□□□ -1.63
Trim47Q8C0E3 Gm15760-201ENSMUST00000119553 283 ntBASIC4.89□□□□□ -1.63
Trim47Q8C0E3 Gm24839-201ENSMUST00000122602 107 ntBASIC4.89□□□□□ -1.63
Trim47Q8C0E3 Gm14041-201ENSMUST00000150181 276 ntTSL 3 BASIC4.89□□□□□ -1.63
Trim47Q8C0E3 Gm24799-201ENSMUST00000178431 79 ntBASIC4.89□□□□□ -1.63
Trim47Q8C0E3 Mir6414-201ENSMUST00000183685 82 ntBASIC4.89□□□□□ -1.63
Trim47Q8C0E3 Gm27457-201ENSMUST00000184771 156 ntBASIC4.89□□□□□ -1.63
Trim47Q8C0E3 Trav7-5-201ENSMUST00000200609 337 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
Trim47Q8C0E3 Gm5876-201ENSMUST00000203735 243 ntBASIC4.89□□□□□ -1.63
Trim47Q8C0E3 Gm44371-201ENSMUST00000204148 467 ntBASIC4.89□□□□□ -1.63
Trim47Q8C0E3 CT030170.6-201ENSMUST00000221149 550 ntTSL 5 BASIC4.89□□□□□ -1.63
Trim47Q8C0E3 Gm10037-202ENSMUST00000221266 549 ntAPPRIS P5 TSL 2 BASIC4.89□□□□□ -1.63
Trim47Q8C0E3 Gm18617-201ENSMUST00000222311 259 ntBASIC4.89□□□□□ -1.63
Trim47Q8C0E3 AC134254.5-201ENSMUST00000223436 400 ntBASIC4.89□□□□□ -1.63
Trim47Q8C0E3 Gm25698-201ENSMUST00000082897 107 ntBASIC4.89□□□□□ -1.63
Trim47Q8C0E3 Snord22-201ENSMUST00000083153 126 ntBASIC4.89□□□□□ -1.63
Trim47Q8C0E3 Gm14295-202ENSMUST00000132883 2505 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Trim47Q8C0E3 Olfr1507-203ENSMUST00000206062 2803 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
Trim47Q8C0E3 Vmn1r14-203ENSMUST00000227574 7394 ntAPPRIS ALT2 BASIC4.88□□□□□ -1.63
Trim47Q8C0E3 Olfr753-ps1-201ENSMUST00000174025 3121 ntAPPRIS P1 TSL 3 BASIC4.88□□□□□ -1.63
Trim47Q8C0E3 Cep290-201ENSMUST00000164751 8006 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Trim47Q8C0E3 Fzd3-202ENSMUST00000131309 12734 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Trim47Q8C0E3 Zfp950-204ENSMUST00000143264 4825 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Trim47Q8C0E3 Mir761-201ENSMUST00000103245 76 ntBASIC4.88□□□□□ -1.63
Trim47Q8C0E3 Gm13873-201ENSMUST00000119208 427 ntBASIC4.88□□□□□ -1.63
Trim47Q8C0E3 Gm14845-201ENSMUST00000121259 306 ntBASIC4.88□□□□□ -1.63
Trim47Q8C0E3 Gm13232-201ENSMUST00000121816 632 ntBASIC4.88□□□□□ -1.63
Trim47Q8C0E3 Gm12708-201ENSMUST00000126143 349 ntTSL 5 BASIC4.88□□□□□ -1.63
Trim47Q8C0E3 Gm16218-201ENSMUST00000155424 388 ntBASIC4.88□□□□□ -1.63
Trim47Q8C0E3 Gm25393-201ENSMUST00000157336 285 ntBASIC4.88□□□□□ -1.63
Trim47Q8C0E3 Gm42666-201ENSMUST00000201954 152 ntBASIC4.88□□□□□ -1.63
Trim47Q8C0E3 CT030645.1-201ENSMUST00000224020 231 ntBASIC4.88□□□□□ -1.63
Trim47Q8C0E3 AC159252.1-201ENSMUST00000224450 553 ntBASIC4.88□□□□□ -1.63
Trim47Q8C0E3 Gm10360-201ENSMUST00000097219 272 ntBASIC4.88□□□□□ -1.63
Trim47Q8C0E3 Kcnt2-203ENSMUST00000120796 3540 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Trim47Q8C0E3 Gm4746-201ENSMUST00000120395 2406 ntBASIC4.88□□□□□ -1.63
Trim47Q8C0E3 Zfp715-202ENSMUST00000048015 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Trim47Q8C0E3 Gm38057-201ENSMUST00000195551 3203 ntBASIC4.88□□□□□ -1.63
Trim47Q8C0E3 Gm37814-201ENSMUST00000195820 3644 ntBASIC4.88□□□□□ -1.63
Trim47Q8C0E3 Olfr889-202ENSMUST00000217286 5673 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Trim47Q8C0E3 Vmn1r184-206ENSMUST00000228145 5888 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Trim47Q8C0E3 Zfy1-201ENSMUST00000065545 2783 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Trim47Q8C0E3 Vmn1r189-203ENSMUST00000228428 3231 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Trim47Q8C0E3 Olfr414-202ENSMUST00000192358 4526 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
Trim47Q8C0E3 Gm37696-201ENSMUST00000194223 3349 ntBASIC4.87□□□□□ -1.63
Trim47Q8C0E3 Jpx-201ENSMUST00000181020 3802 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 95.1 ms