Protein–RNA interactions for Protein: Q80VI1

Trim56, E3 ubiquitin-protein ligase TRIM56, mousemouse

Known RBP Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56Q80VI1 AC164297.1-201ENSMUST00000224484 1561 ntBASIC4.57□□□□□ -1.68
Trim56Q80VI1 Olfr1243-202ENSMUST00000144885 3148 ntAPPRIS P1 TSL 3 BASIC4.57□□□□□ -1.68
Trim56Q80VI1 Traj31-201ENSMUST00000103710 57 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
Trim56Q80VI1 Gm11115-201ENSMUST00000113255 54 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Trim56Q80VI1 Gm15029-201ENSMUST00000119742 199 ntBASIC4.57□□□□□ -1.68
Trim56Q80VI1 Gm14037-201ENSMUST00000120576 313 ntBASIC4.57□□□□□ -1.68
Trim56Q80VI1 Gm15986-201ENSMUST00000122153 400 ntBASIC4.57□□□□□ -1.68
Trim56Q80VI1 Gm11816-201ENSMUST00000142744 353 ntTSL 3 BASIC4.57□□□□□ -1.68
Trim56Q80VI1 Gm6265-201ENSMUST00000149263 231 ntBASIC4.57□□□□□ -1.68
Trim56Q80VI1 Gm24348-201ENSMUST00000158710 130 ntBASIC4.57□□□□□ -1.68
Trim56Q80VI1 Mir6335-201ENSMUST00000184081 98 ntBASIC4.57□□□□□ -1.68
Trim56Q80VI1 Gm44349-201ENSMUST00000197048 123 ntBASIC4.57□□□□□ -1.68
Trim56Q80VI1 Gm43529-201ENSMUST00000199178 412 ntBASIC4.57□□□□□ -1.68
Trim56Q80VI1 Gm6240-201ENSMUST00000208014 473 ntBASIC4.57□□□□□ -1.68
Trim56Q80VI1 Olfr1285-201ENSMUST00000208523 903 ntBASIC4.57□□□□□ -1.68
Trim56Q80VI1 Gm18252-201ENSMUST00000214814 527 ntTSL 5 BASIC4.57□□□□□ -1.68
Trim56Q80VI1 Gm25202-201ENSMUST00000082838 191 ntBASIC4.57□□□□□ -1.68
Trim56Q80VI1 Gm38073-201ENSMUST00000195141 3665 ntBASIC4.57□□□□□ -1.68
Trim56Q80VI1 Vmn1r30-205ENSMUST00000228635 1776 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
Trim56Q80VI1 Ifi203-203ENSMUST00000123708 3482 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
Trim56Q80VI1 Gm37176-201ENSMUST00000193300 4051 ntBASIC4.56□□□□□ -1.68
Trim56Q80VI1 AC156560.3-201ENSMUST00000222978 3841 ntBASIC4.56□□□□□ -1.68
Trim56Q80VI1 AC154548.1-201ENSMUST00000225844 3838 ntBASIC4.56□□□□□ -1.68
Trim56Q80VI1 Olfr1440-208ENSMUST00000217062 7484 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
Trim56Q80VI1 Olfr959-202ENSMUST00000215194 4339 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Trim56Q80VI1 Gm23271-201ENSMUST00000104052 124 ntBASIC4.56□□□□□ -1.68
Trim56Q80VI1 n-R5s67-201ENSMUST00000104336 114 ntBASIC4.56□□□□□ -1.68
Trim56Q80VI1 Gm24831-201ENSMUST00000116778 126 ntBASIC4.56□□□□□ -1.68
Trim56Q80VI1 Rpl23a-ps13-201ENSMUST00000120350 441 ntBASIC4.56□□□□□ -1.68
Trim56Q80VI1 Gm5123-201ENSMUST00000121905 837 ntBASIC4.56□□□□□ -1.68
Trim56Q80VI1 Gm13686-201ENSMUST00000122851 350 ntTSL 3 BASIC4.56□□□□□ -1.68
Trim56Q80VI1 Gm5755-201ENSMUST00000152394 837 ntBASIC4.56□□□□□ -1.68
Trim56Q80VI1 Gm23112-201ENSMUST00000158606 125 ntBASIC4.56□□□□□ -1.68
Trim56Q80VI1 Mir6338-201ENSMUST00000183389 109 ntBASIC4.56□□□□□ -1.68
Trim56Q80VI1 Ranbp2-ps5-201ENSMUST00000185141 379 ntBASIC4.56□□□□□ -1.68
Trim56Q80VI1 Gm29408-201ENSMUST00000187536 216 ntBASIC4.56□□□□□ -1.68
Trim56Q80VI1 Olfr797-ps1-201ENSMUST00000203614 415 ntBASIC4.56□□□□□ -1.68
Trim56Q80VI1 Gm44513-201ENSMUST00000206811 439 ntBASIC4.56□□□□□ -1.68
Trim56Q80VI1 AC126267.1-201ENSMUST00000214282 284 ntBASIC4.56□□□□□ -1.68
Trim56Q80VI1 AC122367.2-201ENSMUST00000220987 534 ntTSL 2 BASIC4.56□□□□□ -1.68
Trim56Q80VI1 Defb40-201ENSMUST00000066258 389 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Trim56Q80VI1 9430025C20Rik-201ENSMUST00000068663 2115 ntBASIC4.56□□□□□ -1.68
Trim56Q80VI1 4930512M02Rik-201ENSMUST00000081896 715 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Trim56Q80VI1 Gm37625-201ENSMUST00000194969 4872 ntBASIC4.56□□□□□ -1.68
Trim56Q80VI1 Olfr887-202ENSMUST00000212502 6281 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Trim56Q80VI1 Gm43508-201ENSMUST00000197251 3783 ntBASIC4.56□□□□□ -1.68
Trim56Q80VI1 Gm3239-201ENSMUST00000163525 1751 ntAPPRIS P5 TSL 5 BASIC4.55□□□□□ -1.68
Trim56Q80VI1 Gm37848-201ENSMUST00000195288 3103 ntBASIC4.55□□□□□ -1.68
Trim56Q80VI1 Gm21032-201ENSMUST00000208108 2578 ntBASIC4.55□□□□□ -1.68
Trim56Q80VI1 Gm12427-201ENSMUST00000117719 302 ntBASIC4.55□□□□□ -1.68
Trim56Q80VI1 Gm14768-201ENSMUST00000122126 678 ntBASIC4.55□□□□□ -1.68
Trim56Q80VI1 Gm13424-201ENSMUST00000122301 354 ntBASIC4.55□□□□□ -1.68
Trim56Q80VI1 Gm11534-201ENSMUST00000125956 204 ntTSL 3 BASIC4.55□□□□□ -1.68
Trim56Q80VI1 Gm23753-201ENSMUST00000157575 149 ntBASIC4.55□□□□□ -1.68
Trim56Q80VI1 Gm23415-201ENSMUST00000175519 83 ntBASIC4.55□□□□□ -1.68
Trim56Q80VI1 Gm24264-201ENSMUST00000179835 94 ntBASIC4.55□□□□□ -1.68
Trim56Q80VI1 Gm7656-201ENSMUST00000182468 1004 ntBASIC4.55□□□□□ -1.68
Trim56Q80VI1 Gm27189-201ENSMUST00000184119 190 ntBASIC4.55□□□□□ -1.68
Trim56Q80VI1 Trav14-2-202ENSMUST00000184874 276 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Trim56Q80VI1 Ska2l-ps-201ENSMUST00000186208 360 ntBASIC4.55□□□□□ -1.68
Trim56Q80VI1 Gm20257-202ENSMUST00000188643 130 ntBASIC4.55□□□□□ -1.68
Trim56Q80VI1 Gm37162-201ENSMUST00000191708 551 ntBASIC4.55□□□□□ -1.68
Trim56Q80VI1 Gm36946-201ENSMUST00000192706 435 ntBASIC4.55□□□□□ -1.68
Trim56Q80VI1 4930431P19Rik-201ENSMUST00000207570 451 ntBASIC4.55□□□□□ -1.68
Trim56Q80VI1 Gm44871-201ENSMUST00000207821 497 ntBASIC4.55□□□□□ -1.68
Trim56Q80VI1 AC127270.2-201ENSMUST00000221337 247 ntBASIC4.55□□□□□ -1.68
Trim56Q80VI1 Olfr388-ps1-201ENSMUST00000118336 2129 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Trim56Q80VI1 Ghr-208ENSMUST00000161561 2749 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Trim56Q80VI1 A630033H20Rik-206ENSMUST00000180182 2997 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
Trim56Q80VI1 Ccr2-201ENSMUST00000055918 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Trim56Q80VI1 Ddi1-201ENSMUST00000051706 7114 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Trim56Q80VI1 Pramel6-202ENSMUST00000111572 1781 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Trim56Q80VI1 Olfr787-202ENSMUST00000213329 4958 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Trim56Q80VI1 Gm7957-201ENSMUST00000207404 2602 ntBASIC4.55□□□□□ -1.68
Trim56Q80VI1 A830019L24Rik-201ENSMUST00000197226 1652 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Trim56Q80VI1 AC153522.2-201ENSMUST00000218389 3853 ntBASIC4.54□□□□□ -1.68
Trim56Q80VI1 AC153150.1-201ENSMUST00000226065 3782 ntBASIC4.54□□□□□ -1.68
Trim56Q80VI1 Olfr853-202ENSMUST00000213834 3888 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Trim56Q80VI1 Gm7853-201ENSMUST00000100708 478 ntBASIC4.54□□□□□ -1.68
Trim56Q80VI1 Igkv8-16-201ENSMUST00000103392 362 ntAPPRIS ALT2 BASIC4.54□□□□□ -1.68
Trim56Q80VI1 Gm13831-201ENSMUST00000118764 302 ntBASIC4.54□□□□□ -1.68
Trim56Q80VI1 Cyp4b1-ps2-201ENSMUST00000119563 333 ntBASIC4.54□□□□□ -1.68
Trim56Q80VI1 Gm14877-201ENSMUST00000119803 478 ntBASIC4.54□□□□□ -1.68
Trim56Q80VI1 Gm22098-201ENSMUST00000157930 85 ntBASIC4.54□□□□□ -1.68
Trim56Q80VI1 Gm24005-201ENSMUST00000158459 296 ntBASIC4.54□□□□□ -1.68
Trim56Q80VI1 Gm20698-201ENSMUST00000175657 233 ntBASIC4.54□□□□□ -1.68
Trim56Q80VI1 Gm29014-201ENSMUST00000191422 326 ntBASIC4.54□□□□□ -1.68
Trim56Q80VI1 Gm37279-201ENSMUST00000194630 338 ntTSL 5 BASIC4.54□□□□□ -1.68
Trim56Q80VI1 Gm34091-201ENSMUST00000200875 604 ntBASIC4.54□□□□□ -1.68
Trim56Q80VI1 Gm44649-201ENSMUST00000205608 364 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Trim56Q80VI1 4930567K20Rik-204ENSMUST00000220270 445 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Trim56Q80VI1 AC091783.5-201ENSMUST00000224928 671 ntBASIC4.54□□□□□ -1.68
Trim56Q80VI1 Gm10092-201ENSMUST00000077110 180 ntBASIC4.54□□□□□ -1.68
Trim56Q80VI1 Olfr1258-203ENSMUST00000213720 7098 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Trim56Q80VI1 Dnah7b-201ENSMUST00000069293 12314 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Trim56Q80VI1 Olfr1331-202ENSMUST00000106360 3230 ntAPPRIS P2 TSL 5 BASIC4.54□□□□□ -1.68
Trim56Q80VI1 Gm37899-201ENSMUST00000193116 8717 ntBASIC4.54□□□□□ -1.68
Trim56Q80VI1 Vmn2r-ps36-201ENSMUST00000172589 2562 ntBASIC4.54□□□□□ -1.68
Trim56Q80VI1 Gm6902-202ENSMUST00000191169 1581 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Trim56Q80VI1 Stk-ps2-201ENSMUST00000051224 4667 ntTSL 2 BASIC4.53□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 80.5 ms