Protein–RNA interactions for Protein: Q69ZI1

Sh3rf1, E3 ubiquitin-protein ligase SH3RF1, mousemouse

Predictions only

Length 892 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1Q69ZI1 9130208D14Rik-201ENSMUST00000146911 7293 ntBASIC4.28□□□□□ -1.72
Sh3rf1Q69ZI1 Vmn1r62-201ENSMUST00000173956 1757 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Sh3rf1Q69ZI1 Tcrg-V4-201ENSMUST00000103554 426 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Sh3rf1Q69ZI1 Trav12d-2-201ENSMUST00000103593 341 ntAPPRIS ALT2 BASIC4.28□□□□□ -1.72
Sh3rf1Q69ZI1 Trav12n-2-201ENSMUST00000103619 341 ntAPPRIS ALT2 BASIC4.28□□□□□ -1.72
Sh3rf1Q69ZI1 Gm11432-201ENSMUST00000117334 231 ntBASIC4.28□□□□□ -1.72
Sh3rf1Q69ZI1 Gm13581-201ENSMUST00000120675 278 ntBASIC4.28□□□□□ -1.72
Sh3rf1Q69ZI1 Gm14770-201ENSMUST00000122197 312 ntBASIC4.28□□□□□ -1.72
Sh3rf1Q69ZI1 Junos-205ENSMUST00000130684 614 ntTSL 3 BASIC4.28□□□□□ -1.72
Sh3rf1Q69ZI1 Gm11240-201ENSMUST00000142047 751 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Sh3rf1Q69ZI1 4930517O19Rik-202ENSMUST00000145018 571 ntTSL 3 BASIC4.28□□□□□ -1.72
Sh3rf1Q69ZI1 Gm6265-201ENSMUST00000149263 231 ntBASIC4.28□□□□□ -1.72
Sh3rf1Q69ZI1 Gm25392-201ENSMUST00000157335 297 ntBASIC4.28□□□□□ -1.72
Sh3rf1Q69ZI1 Gm23219-201ENSMUST00000158123 87 ntBASIC4.28□□□□□ -1.72
Sh3rf1Q69ZI1 Gm22637-201ENSMUST00000158144 283 ntBASIC4.28□□□□□ -1.72
Sh3rf1Q69ZI1 Gm25264-201ENSMUST00000158519 117 ntBASIC4.28□□□□□ -1.72
Sh3rf1Q69ZI1 Gm17187-201ENSMUST00000164622 410 ntBASIC4.28□□□□□ -1.72
Sh3rf1Q69ZI1 Gm27896-201ENSMUST00000175162 317 ntBASIC4.28□□□□□ -1.72
Sh3rf1Q69ZI1 Gm25024-201ENSMUST00000179667 104 ntBASIC4.28□□□□□ -1.72
Sh3rf1Q69ZI1 Scgb2b28-ps-201ENSMUST00000188974 337 ntBASIC4.28□□□□□ -1.72
Sh3rf1Q69ZI1 Gm4035-202ENSMUST00000190684 526 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Sh3rf1Q69ZI1 AC134254.5-201ENSMUST00000223436 400 ntBASIC4.28□□□□□ -1.72
Sh3rf1Q69ZI1 AC074315.1-201ENSMUST00000228801 214 ntBASIC4.28□□□□□ -1.72
Sh3rf1Q69ZI1 Lelp1-201ENSMUST00000029535 857 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Sh3rf1Q69ZI1 Mir32-201ENSMUST00000083610 70 ntBASIC4.28□□□□□ -1.72
Sh3rf1Q69ZI1 Gm4631-202ENSMUST00000121393 4402 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
Sh3rf1Q69ZI1 Gm3584-201ENSMUST00000173822 2565 ntBASIC4.28□□□□□ -1.72
Sh3rf1Q69ZI1 Olfr844-202ENSMUST00000220268 1686 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Sh3rf1Q69ZI1 Olfr393-202ENSMUST00000213365 4048 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Sh3rf1Q69ZI1 Olfr986-204ENSMUST00000218134 3487 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Sh3rf1Q69ZI1 Vmn2r19-201ENSMUST00000073948 2565 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Sh3rf1Q69ZI1 Olfr782-202ENSMUST00000213970 1944 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Sh3rf1Q69ZI1 Mir19b-1-201ENSMUST00000102301 87 ntBASIC4.27□□□□□ -1.73
Sh3rf1Q69ZI1 Gm15896-201ENSMUST00000118045 440 ntBASIC4.27□□□□□ -1.73
Sh3rf1Q69ZI1 Gm14875-201ENSMUST00000120881 319 ntBASIC4.27□□□□□ -1.73
Sh3rf1Q69ZI1 Gm11819-201ENSMUST00000122192 372 ntBASIC4.27□□□□□ -1.73
Sh3rf1Q69ZI1 Scml1-201ENSMUST00000136860 576 ntTSL 3 BASIC4.27□□□□□ -1.73
Sh3rf1Q69ZI1 Gm14041-201ENSMUST00000150181 276 ntTSL 3 BASIC4.27□□□□□ -1.73
Sh3rf1Q69ZI1 Gm13249-201ENSMUST00000177803 345 ntBASIC4.27□□□□□ -1.73
Sh3rf1Q69ZI1 Gm22243-201ENSMUST00000178754 120 ntBASIC4.27□□□□□ -1.73
Sh3rf1Q69ZI1 Gm13144-201ENSMUST00000179385 345 ntBASIC4.27□□□□□ -1.73
Sh3rf1Q69ZI1 Gm22450-201ENSMUST00000179641 107 ntBASIC4.27□□□□□ -1.73
Sh3rf1Q69ZI1 Gm28304-201ENSMUST00000185977 312 ntBASIC4.27□□□□□ -1.73
Sh3rf1Q69ZI1 Gm29256-201ENSMUST00000189094 312 ntBASIC4.27□□□□□ -1.73
Sh3rf1Q69ZI1 Gm28484-201ENSMUST00000190606 312 ntBASIC4.27□□□□□ -1.73
Sh3rf1Q69ZI1 Gm3143-202ENSMUST00000198364 675 ntTSL 2 BASIC4.27□□□□□ -1.73
Sh3rf1Q69ZI1 Gm44145-201ENSMUST00000203711 172 ntTSL 3 BASIC4.27□□□□□ -1.73
Sh3rf1Q69ZI1 Gm15927-204ENSMUST00000206075 372 ntTSL 3 BASIC4.27□□□□□ -1.73
Sh3rf1Q69ZI1 Gm6303-201ENSMUST00000210123 471 ntBASIC4.27□□□□□ -1.73
Sh3rf1Q69ZI1 4930520P13Rik-201ENSMUST00000222622 505 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Sh3rf1Q69ZI1 Gm26071-201ENSMUST00000083261 107 ntBASIC4.27□□□□□ -1.73
Sh3rf1Q69ZI1 n-R5s7-201ENSMUST00000083755 121 ntBASIC4.27□□□□□ -1.73
Sh3rf1Q69ZI1 Gm24521-201ENSMUST00000083958 107 ntBASIC4.27□□□□□ -1.73
Sh3rf1Q69ZI1 AC091683.1-201ENSMUST00000222307 2446 ntBASIC4.27□□□□□ -1.73
Sh3rf1Q69ZI1 Gm42552-201ENSMUST00000196754 4497 ntBASIC4.27□□□□□ -1.73
Sh3rf1Q69ZI1 Vmn1r52-205ENSMUST00000227893 3108 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Sh3rf1Q69ZI1 Vmn1r72-203ENSMUST00000227010 6279 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Sh3rf1Q69ZI1 Olfr107-205ENSMUST00000216844 4021 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Sh3rf1Q69ZI1 2310001H17Rik-203ENSMUST00000181517 3981 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Sh3rf1Q69ZI1 Zfp990-201ENSMUST00000105741 3044 ntAPPRIS P1 TSL 3 BASIC4.26□□□□□ -1.73
Sh3rf1Q69ZI1 Gm22758-201ENSMUST00000102275 96 ntBASIC4.26□□□□□ -1.73
Sh3rf1Q69ZI1 Gm23273-201ENSMUST00000104058 135 ntBASIC4.26□□□□□ -1.73
Sh3rf1Q69ZI1 Gm25938-201ENSMUST00000104139 166 ntBASIC4.26□□□□□ -1.73
Sh3rf1Q69ZI1 Gm12125-201ENSMUST00000117261 736 ntBASIC4.26□□□□□ -1.73
Sh3rf1Q69ZI1 Gm13737-201ENSMUST00000119793 232 ntBASIC4.26□□□□□ -1.73
Sh3rf1Q69ZI1 Gm14649-201ENSMUST00000121814 324 ntBASIC4.26□□□□□ -1.73
Sh3rf1Q69ZI1 Gm26026-201ENSMUST00000122726 123 ntBASIC4.26□□□□□ -1.73
Sh3rf1Q69ZI1 Gm24005-201ENSMUST00000158459 296 ntBASIC4.26□□□□□ -1.73
Sh3rf1Q69ZI1 Mir466b-1-201ENSMUST00000177988 82 ntBASIC4.26□□□□□ -1.73
Sh3rf1Q69ZI1 Gm23002-201ENSMUST00000179221 107 ntBASIC4.26□□□□□ -1.73
Sh3rf1Q69ZI1 Gm6802-202ENSMUST00000186566 126 ntBASIC4.26□□□□□ -1.73
Sh3rf1Q69ZI1 2610044O15Rik8-203ENSMUST00000188757 413 ntTSL 2 BASIC4.26□□□□□ -1.73
Sh3rf1Q69ZI1 Gm1833-201ENSMUST00000191608 682 ntBASIC4.26□□□□□ -1.73
Sh3rf1Q69ZI1 Gm43730-201ENSMUST00000199863 372 ntBASIC4.26□□□□□ -1.73
Sh3rf1Q69ZI1 Gm29926-201ENSMUST00000201443 660 ntTSL 3 BASIC4.26□□□□□ -1.73
Sh3rf1Q69ZI1 Gm45006-201ENSMUST00000206078 690 ntBASIC4.26□□□□□ -1.73
Sh3rf1Q69ZI1 Gm16419-201ENSMUST00000221057 625 ntBASIC4.26□□□□□ -1.73
Sh3rf1Q69ZI1 AC183096.1-201ENSMUST00000226392 130 ntBASIC4.26□□□□□ -1.73
Sh3rf1Q69ZI1 CT485608.1-201ENSMUST00000228759 389 ntBASIC4.26□□□□□ -1.73
Sh3rf1Q69ZI1 Gm23650-201ENSMUST00000083355 70 ntBASIC4.26□□□□□ -1.73
Sh3rf1Q69ZI1 Mir383-201ENSMUST00000083523 70 ntBASIC4.26□□□□□ -1.73
Sh3rf1Q69ZI1 Olfr1167-202ENSMUST00000216951 4276 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Sh3rf1Q69ZI1 Znf41-ps-201ENSMUST00000122051 2413 ntBASIC4.26□□□□□ -1.73
Sh3rf1Q69ZI1 Olfr913-201ENSMUST00000081095 2441 ntAPPRIS P1 TSL 3 BASIC4.26□□□□□ -1.73
Sh3rf1Q69ZI1 Olfr613-201ENSMUST00000106888 5139 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Sh3rf1Q69ZI1 Nexn-211ENSMUST00000199423 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
Sh3rf1Q69ZI1 Olfr598-202ENSMUST00000214765 2026 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Sh3rf1Q69ZI1 Gm45304-201ENSMUST00000210303 2828 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Sh3rf1Q69ZI1 CT025577.1-201ENSMUST00000220862 2846 ntBASIC4.26□□□□□ -1.73
Sh3rf1Q69ZI1 Gm15261-201ENSMUST00000136779 2763 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Sh3rf1Q69ZI1 Gm4788-202ENSMUST00000111986 2935 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Sh3rf1Q69ZI1 Olfr1251-202ENSMUST00000214639 3071 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Sh3rf1Q69ZI1 Tom1l1-201ENSMUST00000020849 4308 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Sh3rf1Q69ZI1 Synpr-207ENSMUST00000223583 3362 ntBASIC4.25□□□□□ -1.73
Sh3rf1Q69ZI1 Olfr1104-202ENSMUST00000214857 2693 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Sh3rf1Q69ZI1 Snord19-201ENSMUST00000104609 76 ntBASIC4.25□□□□□ -1.73
Sh3rf1Q69ZI1 Gm24132-201ENSMUST00000104745 91 ntBASIC4.25□□□□□ -1.73
Sh3rf1Q69ZI1 Gm11065-201ENSMUST00000111462 228 ntBASIC4.25□□□□□ -1.73
Sh3rf1Q69ZI1 Gm11718-201ENSMUST00000119942 537 ntBASIC4.25□□□□□ -1.73
Sh3rf1Q69ZI1 Gm14562-201ENSMUST00000129885 543 ntBASIC4.25□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 99.9 ms