Protein–RNA interactions for Protein: Q62318

Trim28, Transcription intermediary factor 1-beta, mousemouse

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28Q62318 Gm24439-201ENSMUST00000157894 117 ntBASIC4.24□□□□□ -1.73
Trim28Q62318 Gm22532-201ENSMUST00000158822 140 ntBASIC4.24□□□□□ -1.73
Trim28Q62318 Gm17528-201ENSMUST00000171026 239 ntBASIC4.24□□□□□ -1.73
Trim28Q62318 Vmn1r-ps68-201ENSMUST00000174638 399 ntBASIC4.24□□□□□ -1.73
Trim28Q62318 Gm26061-201ENSMUST00000175584 108 ntBASIC4.24□□□□□ -1.73
Trim28Q62318 Gm19641-201ENSMUST00000188432 417 ntBASIC4.24□□□□□ -1.73
Trim28Q62318 Gm42570-201ENSMUST00000195937 292 ntBASIC4.24□□□□□ -1.73
Trim28Q62318 Gm44419-201ENSMUST00000203338 229 ntBASIC4.24□□□□□ -1.73
Trim28Q62318 AC087891.1-201ENSMUST00000217867 318 ntTSL 5 BASIC4.24□□□□□ -1.73
Trim28Q62318 AC135019.1-201ENSMUST00000219949 307 ntBASIC4.24□□□□□ -1.73
Trim28Q62318 Snora23-201ENSMUST00000082517 184 ntBASIC4.24□□□□□ -1.73
Trim28Q62318 Gm24610-201ENSMUST00000083270 109 ntBASIC4.24□□□□□ -1.73
Trim28Q62318 Vmn1r43-203ENSMUST00000226741 12542 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Trim28Q62318 Adgre4-201ENSMUST00000025004 3491 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Trim28Q62318 Cngb3-201ENSMUST00000102999 4708 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Trim28Q62318 Gm42675-201ENSMUST00000197552 4035 ntBASIC4.24□□□□□ -1.73
Trim28Q62318 Gm44438-201ENSMUST00000204388 3236 ntBASIC4.23□□□□□ -1.73
Trim28Q62318 Rab27b-203ENSMUST00000121693 6891 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Trim28Q62318 AC125532.1-201ENSMUST00000216210 2334 ntBASIC4.23□□□□□ -1.73
Trim28Q62318 Olfr1016-202ENSMUST00000216425 2698 ntAPPRIS P1 TSL 3 BASIC4.23□□□□□ -1.73
Trim28Q62318 Gm20345-201ENSMUST00000175839 2414 ntBASIC4.23□□□□□ -1.73
Trim28Q62318 Gm38265-201ENSMUST00000193479 3766 ntBASIC4.23□□□□□ -1.73
Trim28Q62318 Olfr665-202ENSMUST00000215761 2522 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Trim28Q62318 Traj31-201ENSMUST00000103710 57 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Trim28Q62318 Gm22023-201ENSMUST00000104354 130 ntBASIC4.23□□□□□ -1.73
Trim28Q62318 Gm14240-201ENSMUST00000120353 546 ntBASIC4.23□□□□□ -1.73
Trim28Q62318 Gm12434-201ENSMUST00000141580 653 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Trim28Q62318 Gm24909-201ENSMUST00000157290 280 ntBASIC4.23□□□□□ -1.73
Trim28Q62318 Gm26187-201ENSMUST00000157693 101 ntBASIC4.23□□□□□ -1.73
Trim28Q62318 Gm26171-201ENSMUST00000158422 131 ntBASIC4.23□□□□□ -1.73
Trim28Q62318 Gm23523-201ENSMUST00000180190 107 ntBASIC4.23□□□□□ -1.73
Trim28Q62318 Gm18486-201ENSMUST00000184040 298 ntBASIC4.23□□□□□ -1.73
Trim28Q62318 Mir6914-201ENSMUST00000184999 69 ntBASIC4.23□□□□□ -1.73
Trim28Q62318 Gm29192-201ENSMUST00000190942 377 ntBASIC4.23□□□□□ -1.73
Trim28Q62318 Gm37431-201ENSMUST00000195102 111 ntBASIC4.23□□□□□ -1.73
Trim28Q62318 Gm44348-201ENSMUST00000200165 122 ntBASIC4.23□□□□□ -1.73
Trim28Q62318 Gm45738-201ENSMUST00000203645 233 ntTSL 5 BASIC4.23□□□□□ -1.73
Trim28Q62318 Olfr1114-ps1-201ENSMUST00000213896 456 ntBASIC4.23□□□□□ -1.73
Trim28Q62318 Gm19326-201ENSMUST00000219818 326 ntBASIC4.23□□□□□ -1.73
Trim28Q62318 Gm8274-201ENSMUST00000219820 463 ntBASIC4.23□□□□□ -1.73
Trim28Q62318 AC167229.1-201ENSMUST00000220057 469 ntBASIC4.23□□□□□ -1.73
Trim28Q62318 AC133498.1-206ENSMUST00000223254 385 ntTSL 5 BASIC4.23□□□□□ -1.73
Trim28Q62318 CT010454.1-201ENSMUST00000225975 265 ntBASIC4.23□□□□□ -1.73
Trim28Q62318 AC133156.1-202ENSMUST00000227284 363 ntBASIC4.23□□□□□ -1.73
Trim28Q62318 Defb11-201ENSMUST00000051965 317 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Trim28Q62318 Gm26228-201ENSMUST00000082512 107 ntBASIC4.23□□□□□ -1.73
Trim28Q62318 Gm25080-201ENSMUST00000082526 107 ntBASIC4.23□□□□□ -1.73
Trim28Q62318 Gm22997-201ENSMUST00000082845 107 ntBASIC4.23□□□□□ -1.73
Trim28Q62318 Gm23412-201ENSMUST00000083017 107 ntBASIC4.23□□□□□ -1.73
Trim28Q62318 Gm25581-201ENSMUST00000083410 164 ntBASIC4.23□□□□□ -1.73
Trim28Q62318 Gm23731-201ENSMUST00000083749 107 ntBASIC4.23□□□□□ -1.73
Trim28Q62318 Gm25518-201ENSMUST00000083864 107 ntBASIC4.23□□□□□ -1.73
Trim28Q62318 Gm45093-201ENSMUST00000206859 2463 ntBASIC4.23□□□□□ -1.73
Trim28Q62318 Rbm31y-201ENSMUST00000179408 1955 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Trim28Q62318 Gm21379-201ENSMUST00000179772 1955 ntBASIC4.23□□□□□ -1.73
Trim28Q62318 Olfr1104-202ENSMUST00000214857 2693 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Trim28Q62318 Vmn1r46-202ENSMUST00000205088 10770 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
Trim28Q62318 Olfr1211-203ENSMUST00000213412 4173 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Trim28Q62318 Glra3-201ENSMUST00000000275 6508 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Trim28Q62318 Gm42909-201ENSMUST00000196982 3619 ntBASIC4.22□□□□□ -1.73
Trim28Q62318 Olfr1249-202ENSMUST00000216124 3047 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Trim28Q62318 Olfr1370-203ENSMUST00000215357 4285 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Trim28Q62318 Srek1-204ENSMUST00000210489 6330 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Trim28Q62318 Gpr34-202ENSMUST00000096492 1898 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Trim28Q62318 Gm23941-201ENSMUST00000101953 107 ntBASIC4.22□□□□□ -1.73
Trim28Q62318 Gm3443-201ENSMUST00000112772 285 ntAPPRIS P1 TSL 3 BASIC4.22□□□□□ -1.73
Trim28Q62318 Mir1198-201ENSMUST00000116995 121 ntBASIC4.22□□□□□ -1.73
Trim28Q62318 Gm15844-201ENSMUST00000118016 576 ntBASIC4.22□□□□□ -1.73
Trim28Q62318 Gm13345-201ENSMUST00000121928 228 ntBASIC4.22□□□□□ -1.73
Trim28Q62318 Gm23169-201ENSMUST00000157157 112 ntBASIC4.22□□□□□ -1.73
Trim28Q62318 Gm4222-201ENSMUST00000165784 470 ntBASIC4.22□□□□□ -1.73
Trim28Q62318 Gm20692-201ENSMUST00000177251 681 ntTSL 3 BASIC4.22□□□□□ -1.73
Trim28Q62318 Gm11395-201ENSMUST00000181011 499 ntBASIC4.22□□□□□ -1.73
Trim28Q62318 Gm45686-201ENSMUST00000210259 460 ntTSL 5 BASIC4.22□□□□□ -1.73
Trim28Q62318 Gm45730-201ENSMUST00000212560 395 ntBASIC4.22□□□□□ -1.73
Trim28Q62318 AC133076.1-201ENSMUST00000228074 484 ntBASIC4.22□□□□□ -1.73
Trim28Q62318 Gm26439-201ENSMUST00000082592 106 ntBASIC4.22□□□□□ -1.73
Trim28Q62318 Gm42585-201ENSMUST00000198731 4020 ntBASIC4.22□□□□□ -1.73
Trim28Q62318 Olfr959-202ENSMUST00000215194 4339 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Trim28Q62318 Serpina7-201ENSMUST00000033626 2330 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Trim28Q62318 2610300M13Rik-202ENSMUST00000203716 1787 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Trim28Q62318 Gm44150-201ENSMUST00000203317 2619 ntBASIC4.22□□□□□ -1.73
Trim28Q62318 Ifi213-202ENSMUST00000150649 2748 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
Trim28Q62318 Olfr597-202ENSMUST00000216456 2727 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Trim28Q62318 Gm15697-201ENSMUST00000121946 2902 ntBASIC4.22□□□□□ -1.73
Trim28Q62318 Gm15102-201ENSMUST00000118740 1502 ntBASIC4.21□□□□□ -1.73
Trim28Q62318 Gm9696-201ENSMUST00000094227 3050 ntTSL 2 BASIC4.21□□□□□ -1.74
Trim28Q62318 Olfr235-202ENSMUST00000207969 2447 ntAPPRIS P1 TSL 3 BASIC4.21□□□□□ -1.74
Trim28Q62318 Olfr361-202ENSMUST00000214969 2749 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Trim28Q62318 Gm10484-201ENSMUST00000196372 4759 ntBASIC4.21□□□□□ -1.74
Trim28Q62318 Gm24640-201ENSMUST00000116949 126 ntBASIC4.21□□□□□ -1.74
Trim28Q62318 Gm22626-201ENSMUST00000116990 126 ntBASIC4.21□□□□□ -1.74
Trim28Q62318 Gm13880-201ENSMUST00000118421 474 ntBASIC4.21□□□□□ -1.74
Trim28Q62318 Gm12137-201ENSMUST00000119565 346 ntBASIC4.21□□□□□ -1.74
Trim28Q62318 Rpl36a-ps3-201ENSMUST00000120093 321 ntBASIC4.21□□□□□ -1.74
Trim28Q62318 Gm11556-201ENSMUST00000120751 288 ntBASIC4.21□□□□□ -1.74
Trim28Q62318 Gm14271-201ENSMUST00000137886 630 ntTSL 3 BASIC4.21□□□□□ -1.74
Trim28Q62318 Gm22036-201ENSMUST00000157279 215 ntBASIC4.21□□□□□ -1.74
Trim28Q62318 Gm24720-201ENSMUST00000157518 166 ntBASIC4.21□□□□□ -1.74
Trim28Q62318 Gm23411-201ENSMUST00000157988 62 ntBASIC4.21□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 105.4 ms