Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Gm21477-201ENSMUST00000179970 498 ntTSL 5 BASIC2.12□□□□□ -2.07
Six4Q61321 Gm21117-201ENSMUST00000180133 498 ntTSL 5 BASIC2.12□□□□□ -2.07
Six4Q61321 Gm20855-201ENSMUST00000180170 498 ntTSL 5 BASIC2.12□□□□□ -2.07
Six4Q61321 Gm20931-201ENSMUST00000180249 498 ntTSL 5 BASIC2.12□□□□□ -2.07
Six4Q61321 Gm20896-201ENSMUST00000180332 498 ntTSL 5 BASIC2.12□□□□□ -2.07
Six4Q61321 Gm28356-202ENSMUST00000187566 858 ntBASIC2.12□□□□□ -2.07
Six4Q61321 Gm20885-201ENSMUST00000190192 654 ntBASIC2.12□□□□□ -2.07
Six4Q61321 Gm36866-201ENSMUST00000193343 657 ntBASIC2.12□□□□□ -2.07
Six4Q61321 Gm36047-201ENSMUST00000193659 657 ntBASIC2.12□□□□□ -2.07
Six4Q61321 Gm20857-201ENSMUST00000194766 657 ntBASIC2.12□□□□□ -2.07
Six4Q61321 Gm20858-201ENSMUST00000195459 657 ntBASIC2.12□□□□□ -2.07
Six4Q61321 Gm30638-201ENSMUST00000195570 656 ntBASIC2.12□□□□□ -2.07
Six4Q61321 Igkv2-93-1-201ENSMUST00000196774 272 ntBASIC2.12□□□□□ -2.07
Six4Q61321 Ranbp2-ps12-201ENSMUST00000197110 386 ntBASIC2.12□□□□□ -2.07
Six4Q61321 Olfr1556-ps1-201ENSMUST00000204688 466 ntBASIC2.12□□□□□ -2.07
Six4Q61321 AC113305.1-201ENSMUST00000214664 724 ntBASIC2.12□□□□□ -2.07
Six4Q61321 AC117198.1-201ENSMUST00000217080 651 ntTSL 5 BASIC2.12□□□□□ -2.07
Six4Q61321 Olfr1459-201ENSMUST00000078299 1102 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
Six4Q61321 Gm25131-201ENSMUST00000082653 151 ntBASIC2.12□□□□□ -2.07
Six4Q61321 n-R5s196-201ENSMUST00000083136 117 ntBASIC2.12□□□□□ -2.07
Six4Q61321 Gm23650-201ENSMUST00000083355 70 ntBASIC2.12□□□□□ -2.07
Six4Q61321 Usp9y-201ENSMUST00000091188 8094 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
Six4Q61321 Olfr868-201ENSMUST00000212767 4196 ntAPPRIS P1 TSL 3 BASIC2.11□□□□□ -2.07
Six4Q61321 Gpr174-207ENSMUST00000178838 4955 ntAPPRIS P1 TSL 2 BASIC2.11□□□□□ -2.07
Six4Q61321 Gm25094-201ENSMUST00000103992 131 ntBASIC2.11□□□□□ -2.07
Six4Q61321 Gm6954-201ENSMUST00000117416 225 ntBASIC2.11□□□□□ -2.07
Six4Q61321 Gm11460-201ENSMUST00000118200 361 ntBASIC2.11□□□□□ -2.07
Six4Q61321 Gm26105-201ENSMUST00000157253 190 ntBASIC2.11□□□□□ -2.07
Six4Q61321 Gm24857-201ENSMUST00000158061 310 ntBASIC2.11□□□□□ -2.07
Six4Q61321 Vmn2r-ps73-201ENSMUST00000173890 1194 ntBASIC2.11□□□□□ -2.07
Six4Q61321 Gm21828-201ENSMUST00000178050 543 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
Six4Q61321 Gm23933-201ENSMUST00000178405 79 ntBASIC2.11□□□□□ -2.07
Six4Q61321 Gm21866-201ENSMUST00000178428 543 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
Six4Q61321 Gm21725-201ENSMUST00000178519 543 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
Six4Q61321 Gm21800-201ENSMUST00000178559 543 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
Six4Q61321 Gm21852-201ENSMUST00000179125 543 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
Six4Q61321 Gm21764-201ENSMUST00000179219 543 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
Six4Q61321 Gm21891-201ENSMUST00000179284 543 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
Six4Q61321 Gm21904-201ENSMUST00000179522 543 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
Six4Q61321 Igkv1-108-201ENSMUST00000198926 298 ntBASIC2.11□□□□□ -2.07
Six4Q61321 Gm43284-201ENSMUST00000200103 253 ntBASIC2.11□□□□□ -2.07
Six4Q61321 Gm46124-201ENSMUST00000215223 808 ntTSL 5 BASIC2.11□□□□□ -2.07
Six4Q61321 AC093316.1-201ENSMUST00000218793 529 ntTSL 5 BASIC2.11□□□□□ -2.07
Six4Q61321 CT030187.1-201ENSMUST00000220605 252 ntBASIC2.11□□□□□ -2.07
Six4Q61321 AC157494.1-201ENSMUST00000221127 549 ntTSL 5 BASIC2.11□□□□□ -2.07
Six4Q61321 Gm35732-201ENSMUST00000221737 356 ntTSL 3 BASIC2.11□□□□□ -2.07
Six4Q61321 CT010480.1-201ENSMUST00000223612 363 ntBASIC2.11□□□□□ -2.07
Six4Q61321 AC147633.1-201ENSMUST00000225134 259 ntBASIC2.11□□□□□ -2.07
Six4Q61321 AC183096.2-201ENSMUST00000228733 457 ntBASIC2.11□□□□□ -2.07
Six4Q61321 Gm23247-201ENSMUST00000083373 107 ntBASIC2.11□□□□□ -2.07
Six4Q61321 Gm22154-201ENSMUST00000083844 131 ntBASIC2.11□□□□□ -2.07
Six4Q61321 Gm43373-201ENSMUST00000202552 2870 ntBASIC2.11□□□□□ -2.07
Six4Q61321 Vmn1r29-204ENSMUST00000228038 4520 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
Six4Q61321 Olfr561-202ENSMUST00000213432 2498 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
Six4Q61321 n-R5s200-201ENSMUST00000104194 113 ntBASIC2.1□□□□□ -2.07
Six4Q61321 Gm15110-201ENSMUST00000117545 881 ntBASIC2.1□□□□□ -2.07
Six4Q61321 Gm13876-201ENSMUST00000118451 261 ntBASIC2.1□□□□□ -2.07
Six4Q61321 Gm11219-201ENSMUST00000118565 358 ntBASIC2.1□□□□□ -2.07
Six4Q61321 Gm4732-201ENSMUST00000118778 473 ntBASIC2.1□□□□□ -2.07
Six4Q61321 Gm2768-201ENSMUST00000121062 250 ntBASIC2.1□□□□□ -2.07
Six4Q61321 Gm13433-201ENSMUST00000121701 240 ntBASIC2.1□□□□□ -2.07
Six4Q61321 Gm43439-201ENSMUST00000138710 322 ntTSL 3 BASIC2.1□□□□□ -2.07
Six4Q61321 Gm25283-201ENSMUST00000157272 77 ntBASIC2.1□□□□□ -2.07
Six4Q61321 Gm17154-201ENSMUST00000165748 431 ntBASIC2.1□□□□□ -2.07
Six4Q61321 Gm27676-201ENSMUST00000183669 61 ntBASIC2.1□□□□□ -2.07
Six4Q61321 Mir8106-201ENSMUST00000184520 139 ntBASIC2.1□□□□□ -2.07
Six4Q61321 Gm29600-201ENSMUST00000188687 377 ntBASIC2.1□□□□□ -2.07
Six4Q61321 Gm37377-201ENSMUST00000191733 304 ntBASIC2.1□□□□□ -2.07
Six4Q61321 Igkv14-118-1-201ENSMUST00000198645 334 ntBASIC2.1□□□□□ -2.07
Six4Q61321 Igkv11-114-201ENSMUST00000200013 346 ntBASIC2.1□□□□□ -2.07
Six4Q61321 Gm19649-201ENSMUST00000201126 822 ntBASIC2.1□□□□□ -2.07
Six4Q61321 Gm46136-201ENSMUST00000214730 565 ntBASIC2.1□□□□□ -2.07
Six4Q61321 A430103D13Rik-201ENSMUST00000220077 857 ntBASIC2.1□□□□□ -2.07
Six4Q61321 CT572985.2-201ENSMUST00000220496 211 ntBASIC2.1□□□□□ -2.07
Six4Q61321 Gm17890-201ENSMUST00000221419 757 ntBASIC2.1□□□□□ -2.07
Six4Q61321 AC133076.1-201ENSMUST00000228074 484 ntBASIC2.1□□□□□ -2.07
Six4Q61321 Gm45652-201ENSMUST00000210926 3831 ntBASIC2.1□□□□□ -2.07
Six4Q61321 Gm15846-201ENSMUST00000116022 320 ntBASIC2.09□□□□□ -2.07
Six4Q61321 Gm12941-201ENSMUST00000117934 220 ntBASIC2.09□□□□□ -2.07
Six4Q61321 Gm11785-201ENSMUST00000120165 601 ntBASIC2.09□□□□□ -2.07
Six4Q61321 Gm15719-201ENSMUST00000120619 635 ntBASIC2.09□□□□□ -2.07
Six4Q61321 4933406D12Rik-201ENSMUST00000147212 737 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
Six4Q61321 Gm17521-201ENSMUST00000165345 468 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
Six4Q61321 Hmga1b-202ENSMUST00000178955 120 ntBASIC2.09□□□□□ -2.07
Six4Q61321 Ranbp2-ps8-201ENSMUST00000183723 345 ntBASIC2.09□□□□□ -2.07
Six4Q61321 Gm17929-201ENSMUST00000186851 627 ntBASIC2.09□□□□□ -2.07
Six4Q61321 1700044K03Rik-201ENSMUST00000190201 377 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
Six4Q61321 Gm37987-201ENSMUST00000194999 825 ntBASIC2.09□□□□□ -2.07
Six4Q61321 Igkv2-105-201ENSMUST00000196931 377 ntBASIC2.09□□□□□ -2.07
Six4Q61321 Mir378a-201ENSMUST00000198300 66 ntBASIC2.09□□□□□ -2.07
Six4Q61321 D030025E07Rik-205ENSMUST00000198478 418 ntTSL 3 BASIC2.09□□□□□ -2.07
Six4Q61321 Gm43358-201ENSMUST00000199217 970 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
Six4Q61321 Gm8041-201ENSMUST00000199755 616 ntBASIC2.09□□□□□ -2.07
Six4Q61321 Gm43131-201ENSMUST00000200042 969 ntTSL 5 BASIC2.09□□□□□ -2.07
Six4Q61321 Igkv1-136-201ENSMUST00000200635 297 ntBASIC2.09□□□□□ -2.07
Six4Q61321 Gm44818-201ENSMUST00000206608 358 ntBASIC2.09□□□□□ -2.07
Six4Q61321 Olfr499-ps1-201ENSMUST00000208811 930 ntBASIC2.09□□□□□ -2.07
Six4Q61321 AC166060.1-201ENSMUST00000213509 425 ntTSL 5 BASIC2.09□□□□□ -2.07
Six4Q61321 Gm39469-201ENSMUST00000214845 461 ntTSL 2 BASIC2.09□□□□□ -2.07
Six4Q61321 Gm9973-202ENSMUST00000220926 166 ntBASIC2.09□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 83.9 ms