Protein–RNA interactions for Protein: Q61069

Usf1, Upstream stimulatory factor 1, mousemouse

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usf1Q61069 Mir542-201ENSMUST00000102186 85 ntBASIC2.31□□□□□ -2.04
Usf1Q61069 Trbv5-201ENSMUST00000103266 368 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
Usf1Q61069 Gm23744-201ENSMUST00000104231 149 ntBASIC2.31□□□□□ -2.04
Usf1Q61069 Gm13756-201ENSMUST00000117618 222 ntBASIC2.31□□□□□ -2.04
Usf1Q61069 Gm24517-201ENSMUST00000122560 107 ntBASIC2.31□□□□□ -2.04
Usf1Q61069 Gm23867-201ENSMUST00000122649 274 ntBASIC2.31□□□□□ -2.04
Usf1Q61069 Gm22563-201ENSMUST00000157333 269 ntBASIC2.31□□□□□ -2.04
Usf1Q61069 Gm26406-201ENSMUST00000158503 124 ntBASIC2.31□□□□□ -2.04
Usf1Q61069 Tmem29-211ENSMUST00000163233 1256 ntTSL 2 BASIC2.31□□□□□ -2.04
Usf1Q61069 Gm17072-201ENSMUST00000166673 658 ntBASIC2.31□□□□□ -2.04
Usf1Q61069 Gm25470-201ENSMUST00000175576 111 ntBASIC2.31□□□□□ -2.04
Usf1Q61069 4932441J04Rik-201ENSMUST00000180708 729 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
Usf1Q61069 Obox4-ps39-201ENSMUST00000184306 628 ntBASIC2.31□□□□□ -2.04
Usf1Q61069 Mir7226-201ENSMUST00000184953 60 ntBASIC2.31□□□□□ -2.04
Usf1Q61069 Mir3569-201ENSMUST00000185080 58 ntBASIC2.31□□□□□ -2.04
Usf1Q61069 Gm6060-201ENSMUST00000188671 251 ntBASIC2.31□□□□□ -2.04
Usf1Q61069 Gm37599-201ENSMUST00000193067 489 ntBASIC2.31□□□□□ -2.04
Usf1Q61069 Gm37743-201ENSMUST00000194645 376 ntBASIC2.31□□□□□ -2.04
Usf1Q61069 Gm19089-201ENSMUST00000197207 613 ntBASIC2.31□□□□□ -2.04
Usf1Q61069 Gm44449-201ENSMUST00000203610 153 ntBASIC2.31□□□□□ -2.04
Usf1Q61069 Gm43955-201ENSMUST00000204332 142 ntBASIC2.31□□□□□ -2.04
Usf1Q61069 Gm45049-201ENSMUST00000207586 591 ntBASIC2.31□□□□□ -2.04
Usf1Q61069 AC117202.3-201ENSMUST00000228532 310 ntBASIC2.31□□□□□ -2.04
Usf1Q61069 Olfr1161-201ENSMUST00000054845 1012 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
Usf1Q61069 Gm25404-201ENSMUST00000082970 107 ntBASIC2.31□□□□□ -2.04
Usf1Q61069 Gm23848-201ENSMUST00000083826 106 ntBASIC2.31□□□□□ -2.04
Usf1Q61069 Mir463-201ENSMUST00000093570 75 ntBASIC2.31□□□□□ -2.04
Usf1Q61069 Gm23741-201ENSMUST00000097237 171 ntBASIC2.31□□□□□ -2.04
Usf1Q61069 Gm43753-201ENSMUST00000196539 3309 ntBASIC2.31□□□□□ -2.04
Usf1Q61069 Omd-201ENSMUST00000065494 1556 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
Usf1Q61069 Mir344e-201ENSMUST00000104677 66 ntBASIC2.3□□□□□ -2.04
Usf1Q61069 Mir190b-201ENSMUST00000104803 80 ntBASIC2.3□□□□□ -2.04
Usf1Q61069 Olfr1327-ps1-201ENSMUST00000117953 835 ntBASIC2.3□□□□□ -2.04
Usf1Q61069 Gm13510-201ENSMUST00000118659 429 ntBASIC2.3□□□□□ -2.04
Usf1Q61069 Gm13433-201ENSMUST00000121701 240 ntBASIC2.3□□□□□ -2.04
Usf1Q61069 Spink2-203ENSMUST00000121825 643 ntAPPRIS ALT2 TSL 3 BASIC2.3□□□□□ -2.04
Usf1Q61069 Gm26411-201ENSMUST00000157668 107 ntBASIC2.3□□□□□ -2.04
Usf1Q61069 Gm24241-201ENSMUST00000157787 145 ntBASIC2.3□□□□□ -2.04
Usf1Q61069 Gm22517-201ENSMUST00000158265 136 ntBASIC2.3□□□□□ -2.04
Usf1Q61069 Gm23005-201ENSMUST00000158950 136 ntBASIC2.3□□□□□ -2.04
Usf1Q61069 1700129C05Rik-203ENSMUST00000162271 325 ntAPPRIS ALT2 TSL 3 BASIC2.3□□□□□ -2.04
Usf1Q61069 Gm18396-201ENSMUST00000177095 361 ntBASIC2.3□□□□□ -2.04
Usf1Q61069 Gm36984-201ENSMUST00000192770 235 ntBASIC2.3□□□□□ -2.04
Usf1Q61069 Gm7871-201ENSMUST00000195346 618 ntBASIC2.3□□□□□ -2.04
Usf1Q61069 Igkv15-97-201ENSMUST00000197637 339 ntBASIC2.3□□□□□ -2.04
Usf1Q61069 Gm19252-201ENSMUST00000204705 305 ntBASIC2.3□□□□□ -2.04
Usf1Q61069 Gm2511-201ENSMUST00000205521 457 ntTSL 3 BASIC2.3□□□□□ -2.04
Usf1Q61069 Gm20083-201ENSMUST00000205849 751 ntTSL 3 BASIC2.3□□□□□ -2.04
Usf1Q61069 Gm44609-201ENSMUST00000207157 460 ntBASIC2.3□□□□□ -2.04
Usf1Q61069 AC158803.1-201ENSMUST00000219495 316 ntBASIC2.3□□□□□ -2.04
Usf1Q61069 Gm31025-201ENSMUST00000222553 482 ntTSL 5 BASIC2.3□□□□□ -2.04
Usf1Q61069 AC138667.2-201ENSMUST00000224880 598 ntBASIC2.3□□□□□ -2.04
Usf1Q61069 AC129017.1-201ENSMUST00000228363 270 ntBASIC2.3□□□□□ -2.04
Usf1Q61069 Pdcd10-201ENSMUST00000029424 907 ntTSL 5 BASIC2.3□□□□□ -2.04
Usf1Q61069 Olfr394-201ENSMUST00000071478 933 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
Usf1Q61069 Stfa2l1-201ENSMUST00000079184 414 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
Usf1Q61069 Olfr954-201ENSMUST00000080329 945 ntAPPRIS P2 BASIC2.3□□□□□ -2.04
Usf1Q61069 Gm22974-201ENSMUST00000083301 103 ntBASIC2.3□□□□□ -2.04
Usf1Q61069 Gm5670-201ENSMUST00000093546 372 ntBASIC2.3□□□□□ -2.04
Usf1Q61069 Gm15975-201ENSMUST00000122385 1402 ntBASIC2.3□□□□□ -2.04
Usf1Q61069 AC153526.2-201ENSMUST00000218206 2031 ntBASIC2.3□□□□□ -2.04
Usf1Q61069 Vmn2r68-201ENSMUST00000061074 2556 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
Usf1Q61069 Gm43889-201ENSMUST00000203950 3681 ntBASIC2.29□□□□□ -2.04
Usf1Q61069 Ccdc7b-201ENSMUST00000026912 1447 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
Usf1Q61069 Mgat4c-211ENSMUST00000163753 3862 ntAPPRIS P1 TSL 3 BASIC2.29□□□□□ -2.04
Usf1Q61069 Gm25526-201ENSMUST00000104332 132 ntBASIC2.29□□□□□ -2.04
Usf1Q61069 Gm26473-201ENSMUST00000116763 127 ntBASIC2.29□□□□□ -2.04
Usf1Q61069 Rpl31-ps22-201ENSMUST00000117961 337 ntBASIC2.29□□□□□ -2.04
Usf1Q61069 Gm15659-201ENSMUST00000118881 341 ntBASIC2.29□□□□□ -2.04
Usf1Q61069 Rpl23a-ps13-201ENSMUST00000120350 441 ntBASIC2.29□□□□□ -2.04
Usf1Q61069 Gm12639-201ENSMUST00000121400 493 ntBASIC2.29□□□□□ -2.04
Usf1Q61069 Gm13356-201ENSMUST00000121678 335 ntBASIC2.29□□□□□ -2.04
Usf1Q61069 Gm12956-201ENSMUST00000122184 414 ntBASIC2.29□□□□□ -2.04
Usf1Q61069 Gm22236-201ENSMUST00000157093 106 ntBASIC2.29□□□□□ -2.04
Usf1Q61069 Gm24910-201ENSMUST00000157289 272 ntBASIC2.29□□□□□ -2.04
Usf1Q61069 Gm23588-201ENSMUST00000157659 99 ntBASIC2.29□□□□□ -2.04
Usf1Q61069 Gm23078-201ENSMUST00000157848 148 ntBASIC2.29□□□□□ -2.04
Usf1Q61069 Gm24771-201ENSMUST00000158508 137 ntBASIC2.29□□□□□ -2.04
Usf1Q61069 Gm24736-201ENSMUST00000158862 130 ntBASIC2.29□□□□□ -2.04
Usf1Q61069 Snord53-201ENSMUST00000175146 78 ntBASIC2.29□□□□□ -2.04
Usf1Q61069 Vmn1r-ps144-201ENSMUST00000177291 939 ntBASIC2.29□□□□□ -2.04
Usf1Q61069 Gm22716-201ENSMUST00000177596 107 ntBASIC2.29□□□□□ -2.04
Usf1Q61069 Ranbp2-ps9-201ENSMUST00000184566 382 ntBASIC2.29□□□□□ -2.04
Usf1Q61069 Gm28054-201ENSMUST00000187280 872 ntTSL 3 BASIC2.29□□□□□ -2.04
Usf1Q61069 Gm9696-202ENSMUST00000191541 830 ntBASIC2.29□□□□□ -2.04
Usf1Q61069 Gm38041-201ENSMUST00000194445 661 ntBASIC2.29□□□□□ -2.04
Usf1Q61069 Igkv12-49-201ENSMUST00000197714 278 ntBASIC2.29□□□□□ -2.04
Usf1Q61069 Igkv13-61-1-201ENSMUST00000198255 296 ntBASIC2.29□□□□□ -2.04
Usf1Q61069 Gm6615-201ENSMUST00000199426 631 ntBASIC2.29□□□□□ -2.04
Usf1Q61069 Gm32531-201ENSMUST00000209324 373 ntTSL 3 BASIC2.29□□□□□ -2.04
Usf1Q61069 Gm45590-201ENSMUST00000209715 262 ntBASIC2.29□□□□□ -2.04
Usf1Q61069 Gm37797-201ENSMUST00000212114 815 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
Usf1Q61069 AC166060.1-201ENSMUST00000213509 425 ntTSL 5 BASIC2.29□□□□□ -2.04
Usf1Q61069 Olfr1005-ps1-201ENSMUST00000216207 488 ntBASIC2.29□□□□□ -2.04
Usf1Q61069 AC121844.1-201ENSMUST00000218706 137 ntBASIC2.29□□□□□ -2.04
Usf1Q61069 AC122341.1-201ENSMUST00000227291 560 ntBASIC2.29□□□□□ -2.04
Usf1Q61069 CT025525.2-201ENSMUST00000227743 423 ntBASIC2.29□□□□□ -2.04
Usf1Q61069 AC165415.1-201ENSMUST00000228924 273 ntBASIC2.29□□□□□ -2.04
Usf1Q61069 Gm22061-201ENSMUST00000082557 107 ntBASIC2.29□□□□□ -2.04
Usf1Q61069 Mir322-201ENSMUST00000083484 95 ntBASIC2.29□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 131.7 ms