Protein–RNA interactions for Protein: Q5U4C3

Scaf1, Splicing factor, arginine/serine-rich 19, mousemouse

Known RBP Predictions only

Length 1,256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf1Q5U4C3 Gm20513-201ENSMUST00000174074 537 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Scaf1Q5U4C3 Gm14419-204ENSMUST00000178182 192 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Scaf1Q5U4C3 Gm2004-202ENSMUST00000178872 192 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Scaf1Q5U4C3 Gm14295-203ENSMUST00000179435 192 ntTSL 5 BASIC5.72□□□□□ -1.49
Scaf1Q5U4C3 1700027A15Rik-203ENSMUST00000188793 423 ntTSL 3 BASIC5.72□□□□□ -1.49
Scaf1Q5U4C3 Gm44389-201ENSMUST00000203795 182 ntBASIC5.72□□□□□ -1.49
Scaf1Q5U4C3 Gm23517-201ENSMUST00000082830 192 ntBASIC5.72□□□□□ -1.49
Scaf1Q5U4C3 AC102369.2-201ENSMUST00000219725 1679 ntBASIC5.72□□□□□ -1.49
Scaf1Q5U4C3 Olfr716-207ENSMUST00000216871 4062 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Scaf1Q5U4C3 Gm43658-201ENSMUST00000202348 4176 ntBASIC5.71□□□□□ -1.49
Scaf1Q5U4C3 Gm13912-201ENSMUST00000156541 1860 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Scaf1Q5U4C3 AC126673.1-201ENSMUST00000223208 3856 ntBASIC5.71□□□□□ -1.5
Scaf1Q5U4C3 Igkv1-88-201ENSMUST00000103336 362 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Scaf1Q5U4C3 Mir297a-2-201ENSMUST00000103795 90 ntBASIC5.71□□□□□ -1.5
Scaf1Q5U4C3 Gm22779-201ENSMUST00000104085 107 ntBASIC5.71□□□□□ -1.5
Scaf1Q5U4C3 Gm22447-201ENSMUST00000158155 92 ntBASIC5.71□□□□□ -1.5
Scaf1Q5U4C3 Gm24503-201ENSMUST00000158454 135 ntBASIC5.71□□□□□ -1.5
Scaf1Q5U4C3 Gm28000-201ENSMUST00000184380 85 ntBASIC5.71□□□□□ -1.5
Scaf1Q5U4C3 Gm29484-201ENSMUST00000186067 324 ntBASIC5.71□□□□□ -1.5
Scaf1Q5U4C3 Gm38238-201ENSMUST00000194334 346 ntBASIC5.71□□□□□ -1.5
Scaf1Q5U4C3 Gm37417-201ENSMUST00000195257 454 ntBASIC5.71□□□□□ -1.5
Scaf1Q5U4C3 1700126H18Rik-201ENSMUST00000201903 405 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Scaf1Q5U4C3 AC133189.2-201ENSMUST00000228527 392 ntBASIC5.71□□□□□ -1.5
Scaf1Q5U4C3 Xiap-202ENSMUST00000055483 6374 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Scaf1Q5U4C3 Gm26225-201ENSMUST00000082508 135 ntBASIC5.71□□□□□ -1.5
Scaf1Q5U4C3 Gm22685-201ENSMUST00000082848 106 ntBASIC5.71□□□□□ -1.5
Scaf1Q5U4C3 Mir34b-201ENSMUST00000083558 84 ntBASIC5.71□□□□□ -1.5
Scaf1Q5U4C3 Mir32-201ENSMUST00000083610 70 ntBASIC5.71□□□□□ -1.5
Scaf1Q5U4C3 Gpm6a-201ENSMUST00000033915 3215 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Scaf1Q5U4C3 Olfr1058-202ENSMUST00000213998 1710 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Scaf1Q5U4C3 Gm43326-201ENSMUST00000198459 1638 ntBASIC5.7□□□□□ -1.5
Scaf1Q5U4C3 Olfr857-202ENSMUST00000212013 2306 ntAPPRIS P1 TSL 3 BASIC5.7□□□□□ -1.5
Scaf1Q5U4C3 A230057D06Rik-202ENSMUST00000207061 3717 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Scaf1Q5U4C3 Olfr787-202ENSMUST00000213329 4958 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Scaf1Q5U4C3 Gm5127-202ENSMUST00000101297 1809 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Scaf1Q5U4C3 Olfr247-202ENSMUST00000215871 1983 ntAPPRIS P5 TSL 5 BASIC5.7□□□□□ -1.5
Scaf1Q5U4C3 Gm9003-201ENSMUST00000121810 482 ntBASIC5.7□□□□□ -1.5
Scaf1Q5U4C3 Gm14649-201ENSMUST00000121814 324 ntBASIC5.7□□□□□ -1.5
Scaf1Q5U4C3 Gm11240-201ENSMUST00000142047 751 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Scaf1Q5U4C3 Gm25224-201ENSMUST00000158195 68 ntBASIC5.7□□□□□ -1.5
Scaf1Q5U4C3 Gm20651-201ENSMUST00000177219 329 ntBASIC5.7□□□□□ -1.5
Scaf1Q5U4C3 Gm29262-201ENSMUST00000190084 196 ntBASIC5.7□□□□□ -1.5
Scaf1Q5U4C3 Gm43853-201ENSMUST00000197162 301 ntBASIC5.7□□□□□ -1.5
Scaf1Q5U4C3 2200007N16Rik-201ENSMUST00000206367 238 ntBASIC5.7□□□□□ -1.5
Scaf1Q5U4C3 Gm45420-201ENSMUST00000211243 425 ntBASIC5.7□□□□□ -1.5
Scaf1Q5U4C3 AC105958.2-201ENSMUST00000214167 191 ntBASIC5.7□□□□□ -1.5
Scaf1Q5U4C3 Gm30624-201ENSMUST00000220039 628 ntTSL 3 BASIC5.7□□□□□ -1.5
Scaf1Q5U4C3 Gm46998-201ENSMUST00000221444 330 ntBASIC5.7□□□□□ -1.5
Scaf1Q5U4C3 Gm7093-201ENSMUST00000223004 581 ntBASIC5.7□□□□□ -1.5
Scaf1Q5U4C3 AC183096.1-201ENSMUST00000226392 130 ntBASIC5.7□□□□□ -1.5
Scaf1Q5U4C3 Gm5899-201ENSMUST00000071770 270 ntBASIC5.7□□□□□ -1.5
Scaf1Q5U4C3 Olfr1129-202ENSMUST00000213315 2255 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
Scaf1Q5U4C3 Ogn-201ENSMUST00000021822 2566 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Scaf1Q5U4C3 Olfr194-203ENSMUST00000216519 3705 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Scaf1Q5U4C3 Vmn1r42-202ENSMUST00000226436 4045 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Scaf1Q5U4C3 Xist-201ENSMUST00000127786 17769 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Scaf1Q5U4C3 Olfr91-203ENSMUST00000217372 3809 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Scaf1Q5U4C3 Nat1-201ENSMUST00000026677 1347 ntAPPRIS P2 BASIC5.7□□□□□ -1.5
Scaf1Q5U4C3 Zfp493-201ENSMUST00000164936 3258 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Scaf1Q5U4C3 Gm28154-201ENSMUST00000186267 4218 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Scaf1Q5U4C3 Kctd12b-202ENSMUST00000112572 4851 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Scaf1Q5U4C3 Ulbp1-203ENSMUST00000218087 5959 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Scaf1Q5U4C3 Vmn1r66-204ENSMUST00000228086 3013 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Scaf1Q5U4C3 Trbv30-201ENSMUST00000103282 332 ntAPPRIS ALT2 BASIC5.69□□□□□ -1.5
Scaf1Q5U4C3 Gm26019-201ENSMUST00000104407 119 ntBASIC5.69□□□□□ -1.5
Scaf1Q5U4C3 Gm12173-201ENSMUST00000117622 273 ntBASIC5.69□□□□□ -1.5
Scaf1Q5U4C3 Gm11572-201ENSMUST00000119164 120 ntBASIC5.69□□□□□ -1.5
Scaf1Q5U4C3 Gm26479-201ENSMUST00000122620 106 ntBASIC5.69□□□□□ -1.5
Scaf1Q5U4C3 Gm13173-201ENSMUST00000151703 441 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Scaf1Q5U4C3 Gm24905-201ENSMUST00000158129 104 ntBASIC5.69□□□□□ -1.5
Scaf1Q5U4C3 Ifi206-202ENSMUST00000169797 429 ntTSL 5 BASIC5.69□□□□□ -1.5
Scaf1Q5U4C3 Gm25939-201ENSMUST00000179876 191 ntBASIC5.69□□□□□ -1.5
Scaf1Q5U4C3 Gm27803-201ENSMUST00000183763 119 ntBASIC5.69□□□□□ -1.5
Scaf1Q5U4C3 Mir6996-201ENSMUST00000183922 61 ntBASIC5.69□□□□□ -1.5
Scaf1Q5U4C3 Gm27308-201ENSMUST00000184807 233 ntBASIC5.69□□□□□ -1.5
Scaf1Q5U4C3 Gm28830-201ENSMUST00000188192 213 ntBASIC5.69□□□□□ -1.5
Scaf1Q5U4C3 Sprr2h-202ENSMUST00000191886 297 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Scaf1Q5U4C3 Gm37898-201ENSMUST00000193781 174 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Scaf1Q5U4C3 AL731706.1-202ENSMUST00000226652 180 ntAPPRIS P5 BASIC5.69□□□□□ -1.5
Scaf1Q5U4C3 Gm26449-201ENSMUST00000082452 104 ntBASIC5.69□□□□□ -1.5
Scaf1Q5U4C3 Cep290-201ENSMUST00000164751 8006 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Scaf1Q5U4C3 2810474O19Rik-208ENSMUST00000189837 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Scaf1Q5U4C3 Olfr586-203ENSMUST00000213281 5001 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
Scaf1Q5U4C3 Olfr128-202ENSMUST00000216440 3644 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Scaf1Q5U4C3 Olfr64-201ENSMUST00000081748 5001 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Scaf1Q5U4C3 Gm10484-201ENSMUST00000196372 4759 ntBASIC5.68□□□□□ -1.5
Scaf1Q5U4C3 Cul4b-203ENSMUST00000115118 3344 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Scaf1Q5U4C3 Prkdc-201ENSMUST00000023352 12647 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Scaf1Q5U4C3 Ccr9-205ENSMUST00000180093 4239 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Scaf1Q5U4C3 Gm23319-201ENSMUST00000104467 131 ntBASIC5.68□□□□□ -1.5
Scaf1Q5U4C3 Gm3443-201ENSMUST00000112772 285 ntAPPRIS P1 TSL 3 BASIC5.68□□□□□ -1.5
Scaf1Q5U4C3 Gm23988-201ENSMUST00000117034 122 ntBASIC5.68□□□□□ -1.5
Scaf1Q5U4C3 Gm12427-201ENSMUST00000117719 302 ntBASIC5.68□□□□□ -1.5
Scaf1Q5U4C3 Gm13581-201ENSMUST00000120675 278 ntBASIC5.68□□□□□ -1.5
Scaf1Q5U4C3 Gm22986-201ENSMUST00000122753 130 ntBASIC5.68□□□□□ -1.5
Scaf1Q5U4C3 Gm5967-201ENSMUST00000172723 494 ntBASIC5.68□□□□□ -1.5
Scaf1Q5U4C3 Nutf2-ps2-201ENSMUST00000179225 384 ntBASIC5.68□□□□□ -1.5
Scaf1Q5U4C3 Gm8296-201ENSMUST00000185597 524 ntBASIC5.68□□□□□ -1.5
Scaf1Q5U4C3 Gm17887-201ENSMUST00000200194 547 ntBASIC5.68□□□□□ -1.5
Scaf1Q5U4C3 Klk1b28-ps-201ENSMUST00000206374 217 ntBASIC5.68□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 162.1 ms