Protein–RNA interactions for Protein: Q5R1I0

Trav6d-4, T cell receptor alpha variable 6D-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-4Q5R1I0 Gm20698-201ENSMUST00000175657 233 ntBASIC1.1□□□□□ -2.23
Trav6d-4Q5R1I0 Gm20794-201ENSMUST00000177626 628 ntBASIC1.1□□□□□ -2.23
Trav6d-4Q5R1I0 Gm21095-201ENSMUST00000177775 498 ntTSL 5 BASIC1.1□□□□□ -2.23
Trav6d-4Q5R1I0 Gm21858-201ENSMUST00000177834 498 ntTSL 5 BASIC1.1□□□□□ -2.23
Trav6d-4Q5R1I0 Gm20916-201ENSMUST00000178063 498 ntTSL 5 BASIC1.1□□□□□ -2.23
Trav6d-4Q5R1I0 Gm21760-201ENSMUST00000179811 498 ntTSL 5 BASIC1.1□□□□□ -2.23
Trav6d-4Q5R1I0 Gm21477-201ENSMUST00000179970 498 ntTSL 5 BASIC1.1□□□□□ -2.23
Trav6d-4Q5R1I0 Gm21117-201ENSMUST00000180133 498 ntTSL 5 BASIC1.1□□□□□ -2.23
Trav6d-4Q5R1I0 Gm20855-201ENSMUST00000180170 498 ntTSL 5 BASIC1.1□□□□□ -2.23
Trav6d-4Q5R1I0 Gm20931-201ENSMUST00000180249 498 ntTSL 5 BASIC1.1□□□□□ -2.23
Trav6d-4Q5R1I0 Gm20896-201ENSMUST00000180332 498 ntTSL 5 BASIC1.1□□□□□ -2.23
Trav6d-4Q5R1I0 Gm27326-201ENSMUST00000183504 95 ntBASIC1.1□□□□□ -2.23
Trav6d-4Q5R1I0 Gm28356-202ENSMUST00000187566 858 ntBASIC1.1□□□□□ -2.23
Trav6d-4Q5R1I0 Gm21627-201ENSMUST00000187768 918 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
Trav6d-4Q5R1I0 Gm20885-201ENSMUST00000190192 654 ntBASIC1.1□□□□□ -2.23
Trav6d-4Q5R1I0 1700044K03Rik-201ENSMUST00000190201 377 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
Trav6d-4Q5R1I0 Gm33571-201ENSMUST00000193271 657 ntBASIC1.1□□□□□ -2.23
Trav6d-4Q5R1I0 Gm36866-201ENSMUST00000193343 657 ntBASIC1.1□□□□□ -2.23
Trav6d-4Q5R1I0 Gm36047-201ENSMUST00000193659 657 ntBASIC1.1□□□□□ -2.23
Trav6d-4Q5R1I0 Gm20857-201ENSMUST00000194766 657 ntBASIC1.1□□□□□ -2.23
Trav6d-4Q5R1I0 Gm20858-201ENSMUST00000195459 657 ntBASIC1.1□□□□□ -2.23
Trav6d-4Q5R1I0 Gm30638-201ENSMUST00000195570 656 ntBASIC1.1□□□□□ -2.23
Trav6d-4Q5R1I0 AC154296.1-201ENSMUST00000198150 67 ntBASIC1.1□□□□□ -2.23
Trav6d-4Q5R1I0 Mir7215-201ENSMUST00000200383 51 ntBASIC1.1□□□□□ -2.23
Trav6d-4Q5R1I0 Gm45365-201ENSMUST00000209489 256 ntBASIC1.1□□□□□ -2.23
Trav6d-4Q5R1I0 Gm20948-201ENSMUST00000211091 449 ntBASIC1.1□□□□□ -2.23
Trav6d-4Q5R1I0 Gm45455-202ENSMUST00000211156 630 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
Trav6d-4Q5R1I0 Gm9068-201ENSMUST00000217393 455 ntBASIC1.1□□□□□ -2.23
Trav6d-4Q5R1I0 AC101945.1-201ENSMUST00000226734 466 ntBASIC1.1□□□□□ -2.23
Trav6d-4Q5R1I0 CT025525.3-201ENSMUST00000228858 366 ntBASIC1.1□□□□□ -2.23
Trav6d-4Q5R1I0 A630081D01Rik-201ENSMUST00000195842 1833 ntBASIC1.1□□□□□ -2.23
Trav6d-4Q5R1I0 Olfr1148-202ENSMUST00000215230 3095 ntAPPRIS P1 TSL 5 BASIC1.09□□□□□ -2.23
Trav6d-4Q5R1I0 Gm7173-202ENSMUST00000114021 1083 ntAPPRIS ALT2 TSL 5 BASIC1.09□□□□□ -2.23
Trav6d-4Q5R1I0 Gm13731-201ENSMUST00000117332 196 ntBASIC1.09□□□□□ -2.23
Trav6d-4Q5R1I0 Gm14322-202ENSMUST00000119838 1077 ntAPPRIS P1 TSL 5 BASIC1.09□□□□□ -2.23
Trav6d-4Q5R1I0 Gm14411-201ENSMUST00000121798 914 ntBASIC1.09□□□□□ -2.23
Trav6d-4Q5R1I0 Gm14418-202ENSMUST00000128657 1077 ntAPPRIS P1 TSL 5 BASIC1.09□□□□□ -2.23
Trav6d-4Q5R1I0 2210417A02Rik-201ENSMUST00000150265 550 ntTSL 1 (best) BASIC1.09□□□□□ -2.23
Trav6d-4Q5R1I0 Gm12869-201ENSMUST00000156265 344 ntTSL 2 BASIC1.09□□□□□ -2.23
Trav6d-4Q5R1I0 Gm25961-201ENSMUST00000157174 135 ntBASIC1.09□□□□□ -2.23
Trav6d-4Q5R1I0 Gm16162-201ENSMUST00000162296 297 ntBASIC1.09□□□□□ -2.23
Trav6d-4Q5R1I0 Gm2878-201ENSMUST00000170173 486 ntBASIC1.09□□□□□ -2.23
Trav6d-4Q5R1I0 Mir3098-201ENSMUST00000175416 87 ntBASIC1.09□□□□□ -2.23
Trav6d-4Q5R1I0 Gm8897-202ENSMUST00000179679 465 ntAPPRIS ALT2 TSL 5 BASIC1.09□□□□□ -2.23
Trav6d-4Q5R1I0 Gm27265-201ENSMUST00000183559 77 ntBASIC1.09□□□□□ -2.23
Trav6d-4Q5R1I0 Gm8502-201ENSMUST00000185708 901 ntBASIC1.09□□□□□ -2.23
Trav6d-4Q5R1I0 Gm37987-201ENSMUST00000194999 825 ntBASIC1.09□□□□□ -2.23
Trav6d-4Q5R1I0 Gm42476-201ENSMUST00000198860 554 ntTSL 3 BASIC1.09□□□□□ -2.23
Trav6d-4Q5R1I0 Igkv1-108-201ENSMUST00000198926 298 ntBASIC1.09□□□□□ -2.23
Trav6d-4Q5R1I0 A730009L09Rik-202ENSMUST00000210306 201 ntAPPRIS ALT2 TSL 5 BASIC1.09□□□□□ -2.23
Trav6d-4Q5R1I0 Gm29809-201ENSMUST00000218423 493 ntBASIC1.09□□□□□ -2.23
Trav6d-4Q5R1I0 Gm19233-201ENSMUST00000219772 936 ntBASIC1.09□□□□□ -2.23
Trav6d-4Q5R1I0 AC163646.2-201ENSMUST00000227962 141 ntBASIC1.09□□□□□ -2.23
Trav6d-4Q5R1I0 Vmn1r229-201ENSMUST00000076759 921 ntAPPRIS P1 BASIC1.09□□□□□ -2.23
Trav6d-4Q5R1I0 Gm22293-201ENSMUST00000083314 109 ntBASIC1.09□□□□□ -2.23
Trav6d-4Q5R1I0 Mir208a-201ENSMUST00000083498 83 ntBASIC1.09□□□□□ -2.23
Trav6d-4Q5R1I0 Snora33-201ENSMUST00000093556 129 ntBASIC1.09□□□□□ -2.23
Trav6d-4Q5R1I0 Gm6913-201ENSMUST00000100019 348 ntBASIC1.08□□□□□ -2.24
Trav6d-4Q5R1I0 Gm14049-201ENSMUST00000121009 636 ntBASIC1.08□□□□□ -2.24
Trav6d-4Q5R1I0 Gm22478-201ENSMUST00000122570 154 ntBASIC1.08□□□□□ -2.24
Trav6d-4Q5R1I0 Gm4916-201ENSMUST00000126139 642 ntBASIC1.08□□□□□ -2.24
Trav6d-4Q5R1I0 Tslrn1-201ENSMUST00000129479 747 ntTSL 3 BASIC1.08□□□□□ -2.24
Trav6d-4Q5R1I0 Gm21797-201ENSMUST00000177579 543 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
Trav6d-4Q5R1I0 Gm21737-201ENSMUST00000178112 664 ntBASIC1.08□□□□□ -2.24
Trav6d-4Q5R1I0 Gm21767-201ENSMUST00000178689 543 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
Trav6d-4Q5R1I0 Gm21822-201ENSMUST00000179302 543 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
Trav6d-4Q5R1I0 Gm21729-201ENSMUST00000180058 664 ntBASIC1.08□□□□□ -2.24
Trav6d-4Q5R1I0 Gm21853-201ENSMUST00000180071 664 ntBASIC1.08□□□□□ -2.24
Trav6d-4Q5R1I0 Gm20901-201ENSMUST00000180177 664 ntBASIC1.08□□□□□ -2.24
Trav6d-4Q5R1I0 Gm20619-204ENSMUST00000181343 786 ntTSL 5 BASIC1.08□□□□□ -2.24
Trav6d-4Q5R1I0 Mir7665-201ENSMUST00000184907 63 ntBASIC1.08□□□□□ -2.24
Trav6d-4Q5R1I0 Gm29073-201ENSMUST00000185563 664 ntBASIC1.08□□□□□ -2.24
Trav6d-4Q5R1I0 Gm29495-201ENSMUST00000189319 664 ntBASIC1.08□□□□□ -2.24
Trav6d-4Q5R1I0 Gm28090-201ENSMUST00000189458 664 ntBASIC1.08□□□□□ -2.24
Trav6d-4Q5R1I0 Gm21647-201ENSMUST00000189755 664 ntBASIC1.08□□□□□ -2.24
Trav6d-4Q5R1I0 Gm29165-201ENSMUST00000190655 664 ntBASIC1.08□□□□□ -2.24
Trav6d-4Q5R1I0 Gm29211-201ENSMUST00000191470 664 ntBASIC1.08□□□□□ -2.24
Trav6d-4Q5R1I0 Gm36891-201ENSMUST00000191995 655 ntBASIC1.08□□□□□ -2.24
Trav6d-4Q5R1I0 Ighv1-6-201ENSMUST00000193849 293 ntBASIC1.08□□□□□ -2.24
Trav6d-4Q5R1I0 Gm3952-201ENSMUST00000195093 573 ntAPPRIS P1 TSL 5 BASIC1.08□□□□□ -2.24
Trav6d-4Q5R1I0 Gm33866-201ENSMUST00000196911 289 ntBASIC1.08□□□□□ -2.24
Trav6d-4Q5R1I0 Gm26379-202ENSMUST00000200225 132 ntBASIC1.08□□□□□ -2.24
Trav6d-4Q5R1I0 Olfr278-ps1-201ENSMUST00000205676 238 ntBASIC1.08□□□□□ -2.24
Trav6d-4Q5R1I0 Gm44656-201ENSMUST00000208428 490 ntBASIC1.08□□□□□ -2.24
Trav6d-4Q5R1I0 Gm18414-201ENSMUST00000210858 694 ntBASIC1.08□□□□□ -2.24
Trav6d-4Q5R1I0 Gm18360-201ENSMUST00000173327 1524 ntBASIC1.08□□□□□ -2.24
Trav6d-4Q5R1I0 Slco6c1-201ENSMUST00000027569 2747 ntAPPRIS P2 TSL 1 (best) BASIC1.08□□□□□ -2.24
Trav6d-4Q5R1I0 AL645643.1-201ENSMUST00000222438 3897 ntBASIC1.08□□□□□ -2.24
Trav6d-4Q5R1I0 Vmn2r-ps100-201ENSMUST00000221238 1702 ntBASIC1.07□□□□□ -2.24
Trav6d-4Q5R1I0 Gm15084-201ENSMUST00000178585 1502 ntBASIC1.07□□□□□ -2.24
Trav6d-4Q5R1I0 Gm25992-201ENSMUST00000102437 109 ntBASIC1.07□□□□□ -2.24
Trav6d-4Q5R1I0 Rpl30-ps10-201ENSMUST00000117119 347 ntBASIC1.07□□□□□ -2.24
Trav6d-4Q5R1I0 Gm12191-201ENSMUST00000118307 348 ntBASIC1.07□□□□□ -2.24
Trav6d-4Q5R1I0 Rpl30-ps1-201ENSMUST00000119767 348 ntBASIC1.07□□□□□ -2.24
Trav6d-4Q5R1I0 Gm11252-201ENSMUST00000120572 939 ntBASIC1.07□□□□□ -2.24
Trav6d-4Q5R1I0 Gm16428-201ENSMUST00000121193 723 ntBASIC1.07□□□□□ -2.24
Trav6d-4Q5R1I0 Gm22755-201ENSMUST00000157143 100 ntBASIC1.07□□□□□ -2.24
Trav6d-4Q5R1I0 Gm23704-201ENSMUST00000158844 340 ntBASIC1.07□□□□□ -2.24
Trav6d-4Q5R1I0 Vmn1r77-201ENSMUST00000164446 921 ntAPPRIS P2 BASIC1.07□□□□□ -2.24
Trav6d-4Q5R1I0 Gm23714-201ENSMUST00000179259 105 ntBASIC1.07□□□□□ -2.24
Retrieved 100 of 76,532 protein–RNA pairs in 84.3 ms