Protein–RNA interactions for Protein: Q5R1B6

Trav8d-2, T cell receptor alpha variable 8D-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-2Q5R1B6 Gm8207-201ENSMUST00000171204 502 ntBASIC2.22□□□□□ -2.05
Trav8d-2Q5R1B6 BC028528-205ENSMUST00000171519 447 ntAPPRIS P3 TSL 1 (best) BASIC2.22□□□□□ -2.05
Trav8d-2Q5R1B6 Olfr180-201ENSMUST00000171656 1154 ntAPPRIS P2 TSL 2 BASIC2.22□□□□□ -2.05
Trav8d-2Q5R1B6 Vmn1r-ps9-201ENSMUST00000177047 358 ntBASIC2.22□□□□□ -2.05
Trav8d-2Q5R1B6 Gm21028-201ENSMUST00000179470 123 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
Trav8d-2Q5R1B6 Gm21726-201ENSMUST00000179654 392 ntBASIC2.22□□□□□ -2.05
Trav8d-2Q5R1B6 Gm27527-201ENSMUST00000183903 99 ntBASIC2.22□□□□□ -2.05
Trav8d-2Q5R1B6 Gtpbp4-ps5-201ENSMUST00000184969 289 ntBASIC2.22□□□□□ -2.05
Trav8d-2Q5R1B6 Gm29658-201ENSMUST00000185404 230 ntBASIC2.22□□□□□ -2.05
Trav8d-2Q5R1B6 Gm19257-201ENSMUST00000186121 183 ntBASIC2.22□□□□□ -2.05
Trav8d-2Q5R1B6 Gm28163-201ENSMUST00000187099 325 ntBASIC2.22□□□□□ -2.05
Trav8d-2Q5R1B6 Gm28956-201ENSMUST00000189047 427 ntBASIC2.22□□□□□ -2.05
Trav8d-2Q5R1B6 Olfr289-ps1-201ENSMUST00000192834 369 ntBASIC2.22□□□□□ -2.05
Trav8d-2Q5R1B6 Gm30341-201ENSMUST00000194363 289 ntBASIC2.22□□□□□ -2.05
Trav8d-2Q5R1B6 Gm7871-201ENSMUST00000195346 618 ntBASIC2.22□□□□□ -2.05
Trav8d-2Q5R1B6 Gm42805-201ENSMUST00000196158 276 ntBASIC2.22□□□□□ -2.05
Trav8d-2Q5R1B6 Gm43652-201ENSMUST00000196219 675 ntBASIC2.22□□□□□ -2.05
Trav8d-2Q5R1B6 Gm44425-201ENSMUST00000203739 429 ntBASIC2.22□□□□□ -2.05
Trav8d-2Q5R1B6 Gm45288-201ENSMUST00000210236 151 ntBASIC2.22□□□□□ -2.05
Trav8d-2Q5R1B6 Gm39154-201ENSMUST00000210257 560 ntTSL 5 BASIC2.22□□□□□ -2.05
Trav8d-2Q5R1B6 AC122428.1-201ENSMUST00000213709 217 ntTSL 3 BASIC2.22□□□□□ -2.05
Trav8d-2Q5R1B6 Olfr1225-203ENSMUST00000217054 5517 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
Trav8d-2Q5R1B6 Gm46103-201ENSMUST00000217614 341 ntBASIC2.22□□□□□ -2.05
Trav8d-2Q5R1B6 AC168062.3-201ENSMUST00000227025 165 ntBASIC2.22□□□□□ -2.05
Trav8d-2Q5R1B6 AC161758.2-201ENSMUST00000228513 218 ntBASIC2.22□□□□□ -2.05
Trav8d-2Q5R1B6 Tas2r114-201ENSMUST00000080619 930 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
Trav8d-2Q5R1B6 n-R5s196-201ENSMUST00000083136 117 ntBASIC2.22□□□□□ -2.05
Trav8d-2Q5R1B6 Olfr1370-204ENSMUST00000215806 4322 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
Trav8d-2Q5R1B6 Gm44680-201ENSMUST00000208414 2910 ntBASIC2.22□□□□□ -2.05
Trav8d-2Q5R1B6 Hif1a-202ENSMUST00000110461 4385 ntAPPRIS ALT2 TSL 1 (best) BASIC2.22□□□□□ -2.05
Trav8d-2Q5R1B6 Gm19541-201ENSMUST00000184488 2868 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
Trav8d-2Q5R1B6 Ppp1r3a-201ENSMUST00000045096 6965 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
Trav8d-2Q5R1B6 Gm12272-201ENSMUST00000138136 333 ntTSL 5 BASIC2.21□□□□□ -2.06
Trav8d-2Q5R1B6 Gm24264-201ENSMUST00000179835 94 ntBASIC2.21□□□□□ -2.06
Trav8d-2Q5R1B6 4930440C22Rik-201ENSMUST00000185490 1565 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
Trav8d-2Q5R1B6 Gm44295-201ENSMUST00000203805 437 ntBASIC2.21□□□□□ -2.06
Trav8d-2Q5R1B6 Olfr1450-203ENSMUST00000213925 3075 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
Trav8d-2Q5R1B6 Gm33680-201ENSMUST00000219336 576 ntTSL 5 BASIC2.21□□□□□ -2.06
Trav8d-2Q5R1B6 AC101984.1-201ENSMUST00000219639 402 ntBASIC2.21□□□□□ -2.06
Trav8d-2Q5R1B6 AC134468.1-201ENSMUST00000220869 299 ntTSL 5 BASIC2.21□□□□□ -2.06
Trav8d-2Q5R1B6 AC159232.1-201ENSMUST00000222297 580 ntTSL 3 BASIC2.21□□□□□ -2.06
Trav8d-2Q5R1B6 AC192334.2-201ENSMUST00000223087 1091 ntBASIC2.21□□□□□ -2.06
Trav8d-2Q5R1B6 AC174797.4-201ENSMUST00000225510 347 ntBASIC2.21□□□□□ -2.06
Trav8d-2Q5R1B6 AC183092.2-201ENSMUST00000225542 1153 ntBASIC2.21□□□□□ -2.06
Trav8d-2Q5R1B6 Tas2r118-201ENSMUST00000062463 900 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
Trav8d-2Q5R1B6 Olfr815-201ENSMUST00000071557 951 ntBASIC2.21□□□□□ -2.06
Trav8d-2Q5R1B6 Olfr954-201ENSMUST00000080329 945 ntAPPRIS P2 BASIC2.21□□□□□ -2.06
Trav8d-2Q5R1B6 Gm22578-201ENSMUST00000083730 107 ntBASIC2.21□□□□□ -2.06
Trav8d-2Q5R1B6 Gm22723-201ENSMUST00000083820 129 ntBASIC2.21□□□□□ -2.06
Trav8d-2Q5R1B6 Gm5800-201ENSMUST00000095916 903 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
Trav8d-2Q5R1B6 Cyp3a41a-201ENSMUST00000094111 2060 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
Trav8d-2Q5R1B6 Zfp985-201ENSMUST00000081742 2762 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
Trav8d-2Q5R1B6 Skint5-202ENSMUST00000169631 4497 ntAPPRIS P5 TSL 1 (best) BASIC2.21□□□□□ -2.06
Trav8d-2Q5R1B6 Olfr1463-202ENSMUST00000207246 2315 ntAPPRIS P1 TSL 2 BASIC2.2□□□□□ -2.06
Trav8d-2Q5R1B6 Gm45844-205ENSMUST00000210333 3861 ntAPPRIS P5 TSL 1 (best) BASIC2.2□□□□□ -2.06
Trav8d-2Q5R1B6 Olfr1313-203ENSMUST00000216071 2599 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
Trav8d-2Q5R1B6 Gm25563-201ENSMUST00000104603 74 ntBASIC2.2□□□□□ -2.06
Trav8d-2Q5R1B6 Gm3940-201ENSMUST00000105087 432 ntBASIC2.2□□□□□ -2.06
Trav8d-2Q5R1B6 Gm12386-201ENSMUST00000117380 688 ntBASIC2.2□□□□□ -2.06
Trav8d-2Q5R1B6 Gm14602-201ENSMUST00000118625 340 ntBASIC2.2□□□□□ -2.06
Trav8d-2Q5R1B6 Xlr4d-ps-201ENSMUST00000118894 646 ntBASIC2.2□□□□□ -2.06
Trav8d-2Q5R1B6 Gm11785-201ENSMUST00000120165 601 ntBASIC2.2□□□□□ -2.06
Trav8d-2Q5R1B6 Gm26275-201ENSMUST00000157101 268 ntBASIC2.2□□□□□ -2.06
Trav8d-2Q5R1B6 Gm23559-201ENSMUST00000157824 103 ntBASIC2.2□□□□□ -2.06
Trav8d-2Q5R1B6 Gm25836-201ENSMUST00000158918 123 ntBASIC2.2□□□□□ -2.06
Trav8d-2Q5R1B6 Spanxn4-201ENSMUST00000172433 424 ntBASIC2.2□□□□□ -2.06
Trav8d-2Q5R1B6 Gm21746-201ENSMUST00000177612 543 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
Trav8d-2Q5R1B6 Gm21788-201ENSMUST00000177878 543 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
Trav8d-2Q5R1B6 Gm21828-201ENSMUST00000178050 543 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
Trav8d-2Q5R1B6 Gm21725-201ENSMUST00000178519 543 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
Trav8d-2Q5R1B6 Gm21775-201ENSMUST00000178669 540 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
Trav8d-2Q5R1B6 Gm21852-201ENSMUST00000179125 543 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
Trav8d-2Q5R1B6 Gm21764-201ENSMUST00000179219 543 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
Trav8d-2Q5R1B6 Gm21891-201ENSMUST00000179284 543 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
Trav8d-2Q5R1B6 Gm21904-201ENSMUST00000179522 543 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
Trav8d-2Q5R1B6 Gm28189-201ENSMUST00000190085 571 ntTSL 3 BASIC2.2□□□□□ -2.06
Trav8d-2Q5R1B6 Gm37438-201ENSMUST00000192813 393 ntBASIC2.2□□□□□ -2.06
Trav8d-2Q5R1B6 Gm38316-201ENSMUST00000194838 469 ntTSL 5 BASIC2.2□□□□□ -2.06
Trav8d-2Q5R1B6 Gm31752-201ENSMUST00000199456 856 ntTSL 2 BASIC2.2□□□□□ -2.06
Trav8d-2Q5R1B6 Gm44072-201ENSMUST00000203666 383 ntTSL 3 BASIC2.2□□□□□ -2.06
Trav8d-2Q5R1B6 Gm45341-201ENSMUST00000210850 1104 ntTSL 5 BASIC2.2□□□□□ -2.06
Trav8d-2Q5R1B6 Calml4-204ENSMUST00000214633 394 ntTSL 3 BASIC2.2□□□□□ -2.06
Trav8d-2Q5R1B6 AC159621.1-201ENSMUST00000223249 163 ntBASIC2.2□□□□□ -2.06
Trav8d-2Q5R1B6 CT009713.6-201ENSMUST00000223615 294 ntBASIC2.2□□□□□ -2.06
Trav8d-2Q5R1B6 Spata45-201ENSMUST00000077889 432 ntAPPRIS P1 TSL 2 BASIC2.2□□□□□ -2.06
Trav8d-2Q5R1B6 Gm24707-201ENSMUST00000082812 107 ntBASIC2.2□□□□□ -2.06
Trav8d-2Q5R1B6 Gm24948-201ENSMUST00000082866 207 ntBASIC2.2□□□□□ -2.06
Trav8d-2Q5R1B6 Mir19a-201ENSMUST00000083482 82 ntBASIC2.2□□□□□ -2.06
Trav8d-2Q5R1B6 Olfr894-202ENSMUST00000212992 3234 ntAPPRIS ALT2 TSL 5 BASIC2.2□□□□□ -2.06
Trav8d-2Q5R1B6 Olfr801-203ENSMUST00000213294 4045 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
Trav8d-2Q5R1B6 AC154511.1-201ENSMUST00000222578 1587 ntBASIC2.19□□□□□ -2.06
Trav8d-2Q5R1B6 Olfr1052-203ENSMUST00000217166 1694 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
Trav8d-2Q5R1B6 Gm14632-201ENSMUST00000101654 864 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
Trav8d-2Q5R1B6 Mir758-201ENSMUST00000103260 81 ntBASIC2.19□□□□□ -2.06
Trav8d-2Q5R1B6 Gm25421-201ENSMUST00000104218 164 ntBASIC2.19□□□□□ -2.06
Trav8d-2Q5R1B6 Gm5287-201ENSMUST00000120666 598 ntBASIC2.19□□□□□ -2.06
Trav8d-2Q5R1B6 Gm14736-201ENSMUST00000121470 336 ntBASIC2.19□□□□□ -2.06
Trav8d-2Q5R1B6 Zfp950-205ENSMUST00000148569 192 ntTSL 5 BASIC2.19□□□□□ -2.06
Trav8d-2Q5R1B6 Gm22793-201ENSMUST00000157227 330 ntBASIC2.19□□□□□ -2.06
Trav8d-2Q5R1B6 Gm22551-201ENSMUST00000157795 103 ntBASIC2.19□□□□□ -2.06
Retrieved 100 of 76,532 protein–RNA pairs in 106.7 ms