Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Olfr1253-203ENSMUST00000215185 4984 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
Upf3bQ3ULL6 Arhgap5-202ENSMUST00000217820 2332 ntTSL 5 BASIC2.16□□□□□ -2.06
Upf3bQ3ULL6 Gm22543-201ENSMUST00000104347 94 ntBASIC2.15□□□□□ -2.07
Upf3bQ3ULL6 Gm11784-201ENSMUST00000118568 474 ntBASIC2.15□□□□□ -2.07
Upf3bQ3ULL6 Gm13433-201ENSMUST00000121701 240 ntBASIC2.15□□□□□ -2.07
Upf3bQ3ULL6 Gm26256-201ENSMUST00000122499 186 ntBASIC2.15□□□□□ -2.07
Upf3bQ3ULL6 Gm15671-201ENSMUST00000124160 576 ntTSL 5 BASIC2.15□□□□□ -2.07
Upf3bQ3ULL6 Gm15279-201ENSMUST00000155593 288 ntBASIC2.15□□□□□ -2.07
Upf3bQ3ULL6 Gm17555-201ENSMUST00000164042 1113 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
Upf3bQ3ULL6 Gm9071-201ENSMUST00000165915 474 ntBASIC2.15□□□□□ -2.07
Upf3bQ3ULL6 Gm8207-201ENSMUST00000171204 502 ntBASIC2.15□□□□□ -2.07
Upf3bQ3ULL6 Vmn1r-ps86-201ENSMUST00000174052 547 ntBASIC2.15□□□□□ -2.07
Upf3bQ3ULL6 Gm24100-201ENSMUST00000178592 79 ntBASIC2.15□□□□□ -2.07
Upf3bQ3ULL6 1700063O14Rik-201ENSMUST00000187067 492 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
Upf3bQ3ULL6 Gm20776-201ENSMUST00000189940 700 ntBASIC2.15□□□□□ -2.07
Upf3bQ3ULL6 Gm28951-201ENSMUST00000190742 313 ntBASIC2.15□□□□□ -2.07
Upf3bQ3ULL6 Gm37377-201ENSMUST00000191733 304 ntBASIC2.15□□□□□ -2.07
Upf3bQ3ULL6 Gm32033-201ENSMUST00000193483 339 ntBASIC2.15□□□□□ -2.07
Upf3bQ3ULL6 Igkv2-93-1-201ENSMUST00000196774 272 ntBASIC2.15□□□□□ -2.07
Upf3bQ3ULL6 Ighv1-68-201ENSMUST00000198789 294 ntBASIC2.15□□□□□ -2.07
Upf3bQ3ULL6 Gm18635-201ENSMUST00000199020 1060 ntBASIC2.15□□□□□ -2.07
Upf3bQ3ULL6 Gm44472-201ENSMUST00000204922 943 ntBASIC2.15□□□□□ -2.07
Upf3bQ3ULL6 Gm16351-202ENSMUST00000209660 337 ntTSL 5 BASIC2.15□□□□□ -2.07
Upf3bQ3ULL6 Olfr886-ps1-201ENSMUST00000212395 708 ntBASIC2.15□□□□□ -2.07
Upf3bQ3ULL6 AL929285.1-201ENSMUST00000215522 229 ntBASIC2.15□□□□□ -2.07
Upf3bQ3ULL6 AC154603.1-201ENSMUST00000224355 313 ntBASIC2.15□□□□□ -2.07
Upf3bQ3ULL6 Gm5471-201ENSMUST00000072732 337 ntBASIC2.15□□□□□ -2.07
Upf3bQ3ULL6 Olfr746-201ENSMUST00000080616 945 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
Upf3bQ3ULL6 Gm23733-201ENSMUST00000083750 106 ntBASIC2.15□□□□□ -2.07
Upf3bQ3ULL6 Gm27013-202ENSMUST00000205067 1436 ntBASIC2.15□□□□□ -2.07
Upf3bQ3ULL6 Gm43753-201ENSMUST00000196539 3309 ntBASIC2.14□□□□□ -2.07
Upf3bQ3ULL6 Olfr807-203ENSMUST00000217106 1788 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
Upf3bQ3ULL6 Gm8217-201ENSMUST00000119136 465 ntBASIC2.14□□□□□ -2.07
Upf3bQ3ULL6 Gm13482-201ENSMUST00000119842 254 ntBASIC2.14□□□□□ -2.07
Upf3bQ3ULL6 Gm24840-201ENSMUST00000122603 147 ntBASIC2.14□□□□□ -2.07
Upf3bQ3ULL6 Gm6938-201ENSMUST00000123014 771 ntTSL 3 BASIC2.14□□□□□ -2.07
Upf3bQ3ULL6 Gm22727-201ENSMUST00000158090 116 ntBASIC2.14□□□□□ -2.07
Upf3bQ3ULL6 Gm25488-201ENSMUST00000158728 118 ntBASIC2.14□□□□□ -2.07
Upf3bQ3ULL6 Rpl30-ps6-201ENSMUST00000163337 348 ntBASIC2.14□□□□□ -2.07
Upf3bQ3ULL6 Vmn2r-ps73-201ENSMUST00000173890 1194 ntBASIC2.14□□□□□ -2.07
Upf3bQ3ULL6 Gm10717-206ENSMUST00000177875 675 ntTSL 5 BASIC2.14□□□□□ -2.07
Upf3bQ3ULL6 Gm23933-201ENSMUST00000178405 79 ntBASIC2.14□□□□□ -2.07
Upf3bQ3ULL6 Gm10717-207ENSMUST00000179264 672 ntTSL 5 BASIC2.14□□□□□ -2.07
Upf3bQ3ULL6 Gm21758-201ENSMUST00000179336 819 ntBASIC2.14□□□□□ -2.07
Upf3bQ3ULL6 Gm10717-208ENSMUST00000179839 681 ntTSL 5 BASIC2.14□□□□□ -2.07
Upf3bQ3ULL6 Gm10717-209ENSMUST00000179982 681 ntTSL 5 BASIC2.14□□□□□ -2.07
Upf3bQ3ULL6 Gm29322-201ENSMUST00000185378 582 ntTSL 5 BASIC2.14□□□□□ -2.07
Upf3bQ3ULL6 Gm29647-201ENSMUST00000188795 666 ntBASIC2.14□□□□□ -2.07
Upf3bQ3ULL6 Gm20832-201ENSMUST00000189076 665 ntBASIC2.14□□□□□ -2.07
Upf3bQ3ULL6 Gm28241-201ENSMUST00000190916 235 ntBASIC2.14□□□□□ -2.07
Upf3bQ3ULL6 Gm28504-201ENSMUST00000190977 666 ntBASIC2.14□□□□□ -2.07
Upf3bQ3ULL6 Gm31511-201ENSMUST00000193134 657 ntBASIC2.14□□□□□ -2.07
Upf3bQ3ULL6 Gm35843-201ENSMUST00000193716 666 ntBASIC2.14□□□□□ -2.07
Upf3bQ3ULL6 Gm30638-201ENSMUST00000195570 656 ntBASIC2.14□□□□□ -2.07
Upf3bQ3ULL6 Gm36728-201ENSMUST00000195782 665 ntBASIC2.14□□□□□ -2.07
Upf3bQ3ULL6 Igkv14-118-1-201ENSMUST00000198645 334 ntBASIC2.14□□□□□ -2.07
Upf3bQ3ULL6 Igkv11-114-201ENSMUST00000200013 346 ntBASIC2.14□□□□□ -2.07
Upf3bQ3ULL6 Gm39038-201ENSMUST00000206774 355 ntTSL 3 BASIC2.14□□□□□ -2.07
Upf3bQ3ULL6 Gm45368-201ENSMUST00000209323 703 ntTSL 5 BASIC2.14□□□□□ -2.07
Upf3bQ3ULL6 Olfr746-202ENSMUST00000218546 987 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
Upf3bQ3ULL6 4930567K20Rik-203ENSMUST00000220108 646 ntTSL 5 BASIC2.14□□□□□ -2.07
Upf3bQ3ULL6 Scgb1a1-201ENSMUST00000025554 476 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
Upf3bQ3ULL6 Olfr967-201ENSMUST00000069561 933 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
Upf3bQ3ULL6 Defb21-201ENSMUST00000070722 427 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
Upf3bQ3ULL6 Gm23727-201ENSMUST00000083352 164 ntBASIC2.14□□□□□ -2.07
Upf3bQ3ULL6 Gm10717-204ENSMUST00000099056 669 ntTSL 5 BASIC2.14□□□□□ -2.07
Upf3bQ3ULL6 1700017N19Rik-207ENSMUST00000190708 1945 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
Upf3bQ3ULL6 Gm26077-201ENSMUST00000104064 123 ntBASIC2.13□□□□□ -2.07
Upf3bQ3ULL6 Mir883a-201ENSMUST00000104824 76 ntBASIC2.13□□□□□ -2.07
Upf3bQ3ULL6 Gm2003-201ENSMUST00000118537 636 ntBASIC2.13□□□□□ -2.07
Upf3bQ3ULL6 Gm11813-201ENSMUST00000118586 291 ntBASIC2.13□□□□□ -2.07
Upf3bQ3ULL6 Gm15497-201ENSMUST00000119137 551 ntBASIC2.13□□□□□ -2.07
Upf3bQ3ULL6 Gm12825-201ENSMUST00000120249 563 ntBASIC2.13□□□□□ -2.07
Upf3bQ3ULL6 Gm12045-201ENSMUST00000122122 573 ntBASIC2.13□□□□□ -2.07
Upf3bQ3ULL6 Gm25321-201ENSMUST00000122558 102 ntBASIC2.13□□□□□ -2.07
Upf3bQ3ULL6 Gm23032-201ENSMUST00000157995 107 ntBASIC2.13□□□□□ -2.07
Upf3bQ3ULL6 Gm20484-201ENSMUST00000173738 231 ntTSL 2 BASIC2.13□□□□□ -2.07
Upf3bQ3ULL6 Gm23813-201ENSMUST00000175153 77 ntBASIC2.13□□□□□ -2.07
Upf3bQ3ULL6 Gm27676-201ENSMUST00000183669 61 ntBASIC2.13□□□□□ -2.07
Upf3bQ3ULL6 Gm27443-201ENSMUST00000184660 98 ntBASIC2.13□□□□□ -2.07
Upf3bQ3ULL6 9830004L10Rik-202ENSMUST00000188074 687 ntTSL 5 BASIC2.13□□□□□ -2.07
Upf3bQ3ULL6 4930449A18Rik-202ENSMUST00000192453 1200 ntBASIC2.13□□□□□ -2.07
Upf3bQ3ULL6 Igkv2-105-201ENSMUST00000196931 377 ntBASIC2.13□□□□□ -2.07
Upf3bQ3ULL6 Gm45355-201ENSMUST00000211342 296 ntTSL 3 BASIC2.13□□□□□ -2.07
Upf3bQ3ULL6 AC160031.2-201ENSMUST00000218242 274 ntBASIC2.13□□□□□ -2.07
Upf3bQ3ULL6 Olfr823-201ENSMUST00000081469 948 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
Upf3bQ3ULL6 n-R5s79-201ENSMUST00000083071 120 ntBASIC2.13□□□□□ -2.07
Upf3bQ3ULL6 Mir125b-2-201ENSMUST00000083538 71 ntBASIC2.13□□□□□ -2.07
Upf3bQ3ULL6 Olfr987-201ENSMUST00000099929 1075 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
Upf3bQ3ULL6 Gm17969-201ENSMUST00000185706 2557 ntBASIC2.13□□□□□ -2.07
Upf3bQ3ULL6 Olfr1201-203ENSMUST00000216213 2602 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
Upf3bQ3ULL6 Olfr799-202ENSMUST00000213820 1627 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
Upf3bQ3ULL6 AC153966.1-201ENSMUST00000220106 3764 ntBASIC2.12□□□□□ -2.07
Upf3bQ3ULL6 Gm22494-201ENSMUST00000104495 128 ntBASIC2.12□□□□□ -2.07
Upf3bQ3ULL6 Mup-ps14-201ENSMUST00000118437 532 ntBASIC2.12□□□□□ -2.07
Upf3bQ3ULL6 Gm13510-201ENSMUST00000118659 429 ntBASIC2.12□□□□□ -2.07
Upf3bQ3ULL6 Gm12016-201ENSMUST00000119079 681 ntBASIC2.12□□□□□ -2.07
Upf3bQ3ULL6 Gm14748-201ENSMUST00000119819 411 ntBASIC2.12□□□□□ -2.07
Upf3bQ3ULL6 Gm14629-201ENSMUST00000122428 144 ntBASIC2.12□□□□□ -2.07
Upf3bQ3ULL6 Gm23885-201ENSMUST00000122682 294 ntBASIC2.12□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 683.6 ms