Protein–RNA interactions for Protein: Q3ULJ3

Upf3a, MCG3697, isoform CRA_c, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3aQ3ULJ3 Gm23223-201ENSMUST00000158119 127 ntBASIC2.39□□□□□ -2.03
Upf3aQ3ULJ3 Gm17119-201ENSMUST00000163943 280 ntBASIC2.39□□□□□ -2.03
Upf3aQ3ULJ3 Vmn2r-ps80-201ENSMUST00000173697 914 ntBASIC2.39□□□□□ -2.03
Upf3aQ3ULJ3 Gm7258-201ENSMUST00000179317 300 ntBASIC2.39□□□□□ -2.03
Upf3aQ3ULJ3 Mir7009-201ENSMUST00000184519 64 ntBASIC2.39□□□□□ -2.03
Upf3aQ3ULJ3 Igkv2-105-201ENSMUST00000196931 377 ntBASIC2.39□□□□□ -2.03
Upf3aQ3ULJ3 Gm43729-201ENSMUST00000196949 499 ntTSL 3 BASIC2.39□□□□□ -2.03
Upf3aQ3ULJ3 Gm42924-201ENSMUST00000197261 185 ntBASIC2.39□□□□□ -2.03
Upf3aQ3ULJ3 Gm43083-201ENSMUST00000199594 476 ntBASIC2.39□□□□□ -2.03
Upf3aQ3ULJ3 Gm39231-201ENSMUST00000209813 501 ntTSL 5 BASIC2.39□□□□□ -2.03
Upf3aQ3ULJ3 AC073947.3-201ENSMUST00000215576 766 ntBASIC2.39□□□□□ -2.03
Upf3aQ3ULJ3 Gm46193-201ENSMUST00000219399 364 ntBASIC2.39□□□□□ -2.03
Upf3aQ3ULJ3 AC126673.2-201ENSMUST00000221052 686 ntBASIC2.39□□□□□ -2.03
Upf3aQ3ULJ3 Tas2r107-201ENSMUST00000065781 1032 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
Upf3aQ3ULJ3 Hmgb1l-201ENSMUST00000082150 571 ntBASIC2.39□□□□□ -2.03
Upf3aQ3ULJ3 Zfp934-201ENSMUST00000082203 993 ntTSL 5 BASIC2.39□□□□□ -2.03
Upf3aQ3ULJ3 Gm25404-201ENSMUST00000082970 107 ntBASIC2.39□□□□□ -2.03
Upf3aQ3ULJ3 Gm24921-201ENSMUST00000083024 107 ntBASIC2.39□□□□□ -2.03
Upf3aQ3ULJ3 Gm23249-201ENSMUST00000083369 161 ntBASIC2.39□□□□□ -2.03
Upf3aQ3ULJ3 Gm10337-201ENSMUST00000096145 165 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
Upf3aQ3ULJ3 Olfr937-202ENSMUST00000215049 2259 ntAPPRIS P1 TSL 3 BASIC2.39□□□□□ -2.03
Upf3aQ3ULJ3 Gm45262-201ENSMUST00000209917 1463 ntBASIC2.39□□□□□ -2.03
Upf3aQ3ULJ3 Pak3-210ENSMUST00000172330 8135 ntAPPRIS P3 TSL 1 (best) BASIC2.38□□□□□ -2.03
Upf3aQ3ULJ3 Hormad1-202ENSMUST00000090797 1511 ntAPPRIS P3 TSL 1 (best) BASIC2.38□□□□□ -2.03
Upf3aQ3ULJ3 n-R5s200-201ENSMUST00000104194 113 ntBASIC2.38□□□□□ -2.03
Upf3aQ3ULJ3 F8-202ENSMUST00000114085 7295 ntAPPRIS ALT2 TSL 1 (best) BASIC2.38□□□□□ -2.03
Upf3aQ3ULJ3 Mir1192-201ENSMUST00000116976 121 ntBASIC2.38□□□□□ -2.03
Upf3aQ3ULJ3 Gm23588-201ENSMUST00000157659 99 ntBASIC2.38□□□□□ -2.03
Upf3aQ3ULJ3 Gm23476-201ENSMUST00000158881 274 ntBASIC2.38□□□□□ -2.03
Upf3aQ3ULJ3 Hmgb3-ps-201ENSMUST00000162465 601 ntBASIC2.38□□□□□ -2.03
Upf3aQ3ULJ3 Gm16561-201ENSMUST00000163001 192 ntBASIC2.38□□□□□ -2.03
Upf3aQ3ULJ3 Mir5129-201ENSMUST00000174938 78 ntBASIC2.38□□□□□ -2.03
Upf3aQ3ULJ3 Gm22192-201ENSMUST00000175128 85 ntBASIC2.38□□□□□ -2.03
Upf3aQ3ULJ3 Vmn1r-ps10-201ENSMUST00000176165 889 ntBASIC2.38□□□□□ -2.03
Upf3aQ3ULJ3 Anks1b-207ENSMUST00000182045 544 ntTSL 3 BASIC2.38□□□□□ -2.03
Upf3aQ3ULJ3 Mir7026-201ENSMUST00000184384 67 ntBASIC2.38□□□□□ -2.03
Upf3aQ3ULJ3 Gm28666-201ENSMUST00000186649 274 ntBASIC2.38□□□□□ -2.03
Upf3aQ3ULJ3 1700010I02Rik-202ENSMUST00000188525 430 ntTSL 3 BASIC2.38□□□□□ -2.03
Upf3aQ3ULJ3 Gm37892-201ENSMUST00000192018 437 ntTSL 3 BASIC2.38□□□□□ -2.03
Upf3aQ3ULJ3 Gm38316-201ENSMUST00000194838 469 ntTSL 5 BASIC2.38□□□□□ -2.03
Upf3aQ3ULJ3 Gm42857-201ENSMUST00000200823 339 ntBASIC2.38□□□□□ -2.03
Upf3aQ3ULJ3 Gm19649-201ENSMUST00000201126 822 ntBASIC2.38□□□□□ -2.03
Upf3aQ3ULJ3 Gm44135-201ENSMUST00000205221 368 ntBASIC2.38□□□□□ -2.03
Upf3aQ3ULJ3 Gm18453-201ENSMUST00000208000 626 ntBASIC2.38□□□□□ -2.03
Upf3aQ3ULJ3 Olfr886-ps1-201ENSMUST00000212395 708 ntBASIC2.38□□□□□ -2.03
Upf3aQ3ULJ3 Gm46367-202ENSMUST00000222771 501 ntTSL 5 BASIC2.38□□□□□ -2.03
Upf3aQ3ULJ3 AC160930.1-201ENSMUST00000227194 337 ntBASIC2.38□□□□□ -2.03
Upf3aQ3ULJ3 Defb10-201ENSMUST00000054162 298 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
Upf3aQ3ULJ3 Gm25632-201ENSMUST00000083112 85 ntBASIC2.38□□□□□ -2.03
Upf3aQ3ULJ3 AC152951.2-201ENSMUST00000218293 3587 ntBASIC2.38□□□□□ -2.03
Upf3aQ3ULJ3 Gm18751-201ENSMUST00000185777 2013 ntBASIC2.37□□□□□ -2.03
Upf3aQ3ULJ3 Vma21-ps-201ENSMUST00000114578 306 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
Upf3aQ3ULJ3 Gm13806-201ENSMUST00000117822 325 ntBASIC2.37□□□□□ -2.03
Upf3aQ3ULJ3 Cox20-ps-201ENSMUST00000119872 353 ntBASIC2.37□□□□□ -2.03
Upf3aQ3ULJ3 Gm13341-201ENSMUST00000120780 672 ntBASIC2.37□□□□□ -2.03
Upf3aQ3ULJ3 Gm26424-201ENSMUST00000122530 104 ntBASIC2.37□□□□□ -2.03
Upf3aQ3ULJ3 Gm2020-201ENSMUST00000145242 579 ntBASIC2.37□□□□□ -2.03
Upf3aQ3ULJ3 Gm23980-201ENSMUST00000157135 158 ntBASIC2.37□□□□□ -2.03
Upf3aQ3ULJ3 Gm26101-201ENSMUST00000157246 105 ntBASIC2.37□□□□□ -2.03
Upf3aQ3ULJ3 Gm24010-201ENSMUST00000157731 282 ntBASIC2.37□□□□□ -2.03
Upf3aQ3ULJ3 Gm22159-201ENSMUST00000158412 130 ntBASIC2.37□□□□□ -2.03
Upf3aQ3ULJ3 Gm16588-201ENSMUST00000162889 355 ntBASIC2.37□□□□□ -2.03
Upf3aQ3ULJ3 Gm17377-201ENSMUST00000165184 207 ntBASIC2.37□□□□□ -2.03
Upf3aQ3ULJ3 Vmn1r-ps83-201ENSMUST00000172677 705 ntBASIC2.37□□□□□ -2.03
Upf3aQ3ULJ3 Vmn1r-ps24-201ENSMUST00000175772 900 ntBASIC2.37□□□□□ -2.03
Upf3aQ3ULJ3 Gm3543-202ENSMUST00000179947 231 ntTSL 5 BASIC2.37□□□□□ -2.03
Upf3aQ3ULJ3 Gm44387-201ENSMUST00000196298 145 ntBASIC2.37□□□□□ -2.03
Upf3aQ3ULJ3 Gm40292-201ENSMUST00000202383 553 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
Upf3aQ3ULJ3 Gm44555-201ENSMUST00000209008 148 ntBASIC2.37□□□□□ -2.03
Upf3aQ3ULJ3 Gm45252-201ENSMUST00000211579 397 ntBASIC2.37□□□□□ -2.03
Upf3aQ3ULJ3 AC155715.1-201ENSMUST00000213575 463 ntBASIC2.37□□□□□ -2.03
Upf3aQ3ULJ3 Gm9068-201ENSMUST00000217393 455 ntBASIC2.37□□□□□ -2.03
Upf3aQ3ULJ3 AC165146.1-201ENSMUST00000223777 900 ntBASIC2.37□□□□□ -2.03
Upf3aQ3ULJ3 AC127578.1-201ENSMUST00000227289 93 ntBASIC2.37□□□□□ -2.03
Upf3aQ3ULJ3 AC131029.2-202ENSMUST00000228430 496 ntBASIC2.37□□□□□ -2.03
Upf3aQ3ULJ3 Mir222-201ENSMUST00000083537 79 ntBASIC2.37□□□□□ -2.03
Upf3aQ3ULJ3 Olfr110-201ENSMUST00000168318 1639 ntAPPRIS P1 TSL 2 BASIC2.37□□□□□ -2.03
Upf3aQ3ULJ3 Gm37630-201ENSMUST00000194210 1456 ntBASIC2.37□□□□□ -2.03
Upf3aQ3ULJ3 Olfr902-202ENSMUST00000213105 2113 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
Upf3aQ3ULJ3 Gm45872-201ENSMUST00000209804 1584 ntBASIC2.36□□□□□ -2.03
Upf3aQ3ULJ3 Gm37566-201ENSMUST00000192363 4355 ntBASIC2.36□□□□□ -2.03
Upf3aQ3ULJ3 Gm13219-201ENSMUST00000144870 3019 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
Upf3aQ3ULJ3 Gm25414-201ENSMUST00000101814 107 ntBASIC2.36□□□□□ -2.03
Upf3aQ3ULJ3 Gm16355-201ENSMUST00000128606 231 ntBASIC2.36□□□□□ -2.03
Upf3aQ3ULJ3 1700036O09Rik-201ENSMUST00000136834 349 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
Upf3aQ3ULJ3 Gm26186-201ENSMUST00000157689 125 ntBASIC2.36□□□□□ -2.03
Upf3aQ3ULJ3 Vmn2r-ps84-201ENSMUST00000173377 897 ntBASIC2.36□□□□□ -2.03
Upf3aQ3ULJ3 Mir5099-201ENSMUST00000175257 74 ntBASIC2.36□□□□□ -2.03
Upf3aQ3ULJ3 Gm28744-201ENSMUST00000189939 340 ntBASIC2.36□□□□□ -2.03
Upf3aQ3ULJ3 Gm38041-201ENSMUST00000194445 661 ntBASIC2.36□□□□□ -2.03
Upf3aQ3ULJ3 Gm37459-202ENSMUST00000195007 563 ntTSL 3 BASIC2.36□□□□□ -2.03
Upf3aQ3ULJ3 Gm43026-201ENSMUST00000202972 325 ntBASIC2.36□□□□□ -2.03
Upf3aQ3ULJ3 Olfr505-ps1-201ENSMUST00000207626 976 ntBASIC2.36□□□□□ -2.03
Upf3aQ3ULJ3 AC134468.1-201ENSMUST00000220869 299 ntTSL 5 BASIC2.36□□□□□ -2.03
Upf3aQ3ULJ3 Gm7984-201ENSMUST00000060640 538 ntBASIC2.36□□□□□ -2.03
Upf3aQ3ULJ3 Olfr1471-204ENSMUST00000217249 1662 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
Upf3aQ3ULJ3 Olfr1442-202ENSMUST00000207341 3126 ntAPPRIS P1 TSL 3 BASIC2.36□□□□□ -2.03
Upf3aQ3ULJ3 Olfr1442-204ENSMUST00000208657 3148 ntAPPRIS P1 TSL 3 BASIC2.36□□□□□ -2.03
Upf3aQ3ULJ3 Olfr974-202ENSMUST00000213246 3561 ntAPPRIS P1 TSL 2 BASIC2.36□□□□□ -2.03
Upf3aQ3ULJ3 4930440C22Rik-201ENSMUST00000185490 1565 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
Retrieved 100 of 76,532 protein–RNA pairs in 80.1 ms