Protein–RNA interactions for Protein: Q3U827

Rnf180, E3 ubiquitin-protein ligase RNF180, mousemouse

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf180Q3U827 Gm24666-201ENSMUST00000158937 167 ntBASIC4.23□□□□□ -1.73
Rnf180Q3U827 Gm27505-201ENSMUST00000185071 110 ntBASIC4.23□□□□□ -1.73
Rnf180Q3U827 Gm29484-201ENSMUST00000186067 324 ntBASIC4.23□□□□□ -1.73
Rnf180Q3U827 Gm29192-201ENSMUST00000190942 377 ntBASIC4.23□□□□□ -1.73
Rnf180Q3U827 Gm6059-201ENSMUST00000196903 340 ntBASIC4.23□□□□□ -1.73
Rnf180Q3U827 Gm44063-201ENSMUST00000203307 376 ntBASIC4.23□□□□□ -1.73
Rnf180Q3U827 Gm44959-201ENSMUST00000209127 231 ntBASIC4.23□□□□□ -1.73
Rnf180Q3U827 Gm6842-201ENSMUST00000211361 390 ntBASIC4.23□□□□□ -1.73
Rnf180Q3U827 AC102312.1-201ENSMUST00000217752 475 ntTSL 3 BASIC4.23□□□□□ -1.73
Rnf180Q3U827 AC158798.1-201ENSMUST00000219714 711 ntTSL 5 BASIC4.23□□□□□ -1.73
Rnf180Q3U827 Olfr937-201ENSMUST00000055567 936 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Rnf180Q3U827 Gm23650-201ENSMUST00000083355 70 ntBASIC4.23□□□□□ -1.73
Rnf180Q3U827 A330044P14Rik-201ENSMUST00000176108 2706 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Rnf180Q3U827 Gm4788-202ENSMUST00000111986 2935 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Rnf180Q3U827 Olfr1297-202ENSMUST00000213398 6998 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
Rnf180Q3U827 AC121844.2-201ENSMUST00000219067 2066 ntBASIC4.23□□□□□ -1.73
Rnf180Q3U827 Olfr699-203ENSMUST00000216307 4193 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Rnf180Q3U827 Olfr111-203ENSMUST00000215424 2548 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Rnf180Q3U827 Elavl4-204ENSMUST00000106598 3997 ntAPPRIS ALT1 TSL 5 BASIC4.22□□□□□ -1.73
Rnf180Q3U827 Gm44925-201ENSMUST00000208879 2110 ntBASIC4.22□□□□□ -1.73
Rnf180Q3U827 Olfr138-202ENSMUST00000172843 1769 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
Rnf180Q3U827 Gm14440-202ENSMUST00000109051 3382 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Rnf180Q3U827 Skint3-201ENSMUST00000038455 3627 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
Rnf180Q3U827 Olfr1309-202ENSMUST00000214537 4274 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Rnf180Q3U827 Igkv3-7-201ENSMUST00000103399 299 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Rnf180Q3U827 Gm3443-201ENSMUST00000112772 285 ntAPPRIS P1 TSL 3 BASIC4.22□□□□□ -1.73
Rnf180Q3U827 Gm12865-201ENSMUST00000137353 326 ntTSL 2 BASIC4.22□□□□□ -1.73
Rnf180Q3U827 Gm26187-201ENSMUST00000157693 101 ntBASIC4.22□□□□□ -1.73
Rnf180Q3U827 Gm22891-201ENSMUST00000158641 164 ntBASIC4.22□□□□□ -1.73
Rnf180Q3U827 Gm24675-201ENSMUST00000158757 259 ntBASIC4.22□□□□□ -1.73
Rnf180Q3U827 Gm17117-201ENSMUST00000163665 299 ntBASIC4.22□□□□□ -1.73
Rnf180Q3U827 Gm17162-201ENSMUST00000168538 473 ntBASIC4.22□□□□□ -1.73
Rnf180Q3U827 Gm24168-201ENSMUST00000178825 107 ntBASIC4.22□□□□□ -1.73
Rnf180Q3U827 Gm9022-202ENSMUST00000183285 483 ntBASIC4.22□□□□□ -1.73
Rnf180Q3U827 Gm28717-201ENSMUST00000189950 315 ntBASIC4.22□□□□□ -1.73
Rnf180Q3U827 Gm29330-201ENSMUST00000190032 699 ntBASIC4.22□□□□□ -1.73
Rnf180Q3U827 Gm18551-201ENSMUST00000195594 642 ntBASIC4.22□□□□□ -1.73
Rnf180Q3U827 Gm43614-201ENSMUST00000197030 517 ntTSL 2 BASIC4.22□□□□□ -1.73
Rnf180Q3U827 Gm42578-201ENSMUST00000199960 194 ntBASIC4.22□□□□□ -1.73
Rnf180Q3U827 AC167229.1-201ENSMUST00000220057 469 ntBASIC4.22□□□□□ -1.73
Rnf180Q3U827 Gm46367-202ENSMUST00000222771 501 ntTSL 5 BASIC4.22□□□□□ -1.73
Rnf180Q3U827 AC166113.1-201ENSMUST00000225258 475 ntBASIC4.22□□□□□ -1.73
Rnf180Q3U827 A230057D06Rik-203ENSMUST00000208953 3357 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Rnf180Q3U827 Zfp990-201ENSMUST00000105741 3044 ntAPPRIS P1 TSL 3 BASIC4.22□□□□□ -1.73
Rnf180Q3U827 Gm43230-201ENSMUST00000200980 2129 ntBASIC4.22□□□□□ -1.73
Rnf180Q3U827 Gm5798-201ENSMUST00000164613 1751 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Rnf180Q3U827 Fsip2-203ENSMUST00000143764 21116 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Rnf180Q3U827 Abi3bp-203ENSMUST00000096013 4495 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.73
Rnf180Q3U827 Gm15101-201ENSMUST00000178818 1502 ntBASIC4.21□□□□□ -1.73
Rnf180Q3U827 Cdh12-203ENSMUST00000227496 6004 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Rnf180Q3U827 Olfr65-201ENSMUST00000106864 2648 ntAPPRIS ALT1 TSL 5 BASIC4.21□□□□□ -1.74
Rnf180Q3U827 Vmn1r46-202ENSMUST00000205088 10770 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
Rnf180Q3U827 Gm26147-201ENSMUST00000104479 114 ntBASIC4.21□□□□□ -1.74
Rnf180Q3U827 Gm12235-201ENSMUST00000118596 170 ntBASIC4.21□□□□□ -1.74
Rnf180Q3U827 Gm11785-201ENSMUST00000120165 601 ntBASIC4.21□□□□□ -1.74
Rnf180Q3U827 Gm15190-201ENSMUST00000120855 276 ntBASIC4.21□□□□□ -1.74
Rnf180Q3U827 Gm3027-201ENSMUST00000167579 451 ntBASIC4.21□□□□□ -1.74
Rnf180Q3U827 Lce6a-202ENSMUST00000170676 485 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Rnf180Q3U827 Gm20484-201ENSMUST00000173738 231 ntTSL 2 BASIC4.21□□□□□ -1.74
Rnf180Q3U827 Gm21842-201ENSMUST00000177552 498 ntBASIC4.21□□□□□ -1.74
Rnf180Q3U827 Gm21626-201ENSMUST00000177791 498 ntBASIC4.21□□□□□ -1.74
Rnf180Q3U827 Gm21562-201ENSMUST00000177888 498 ntBASIC4.21□□□□□ -1.74
Rnf180Q3U827 Gm21539-201ENSMUST00000177925 498 ntBASIC4.21□□□□□ -1.74
Rnf180Q3U827 Gm21599-201ENSMUST00000178249 498 ntBASIC4.21□□□□□ -1.74
Rnf180Q3U827 Gm21914-201ENSMUST00000178452 498 ntBASIC4.21□□□□□ -1.74
Rnf180Q3U827 Gm21723-201ENSMUST00000178692 498 ntBASIC4.21□□□□□ -1.74
Rnf180Q3U827 Gm21916-201ENSMUST00000178771 498 ntBASIC4.21□□□□□ -1.74
Rnf180Q3U827 Gm21801-201ENSMUST00000178865 498 ntBASIC4.21□□□□□ -1.74
Rnf180Q3U827 Gm21633-201ENSMUST00000178941 498 ntBASIC4.21□□□□□ -1.74
Rnf180Q3U827 Gm21821-201ENSMUST00000179646 498 ntBASIC4.21□□□□□ -1.74
Rnf180Q3U827 Gm21588-201ENSMUST00000180074 498 ntBASIC4.21□□□□□ -1.74
Rnf180Q3U827 Gm21780-201ENSMUST00000180128 498 ntBASIC4.21□□□□□ -1.74
Rnf180Q3U827 Gm21572-201ENSMUST00000180134 498 ntBASIC4.21□□□□□ -1.74
Rnf180Q3U827 Gm21529-201ENSMUST00000180175 498 ntBASIC4.21□□□□□ -1.74
Rnf180Q3U827 Gm27783-201ENSMUST00000183534 105 ntBASIC4.21□□□□□ -1.74
Rnf180Q3U827 Gm29370-202ENSMUST00000187476 499 ntBASIC4.21□□□□□ -1.74
Rnf180Q3U827 AC091764.1-201ENSMUST00000218029 132 ntTSL 5 BASIC4.21□□□□□ -1.74
Rnf180Q3U827 AC153564.2-201ENSMUST00000219464 273 ntBASIC4.21□□□□□ -1.74
Rnf180Q3U827 Snord35b-201ENSMUST00000082833 87 ntBASIC4.21□□□□□ -1.74
Rnf180Q3U827 Gm22974-201ENSMUST00000083301 103 ntBASIC4.21□□□□□ -1.74
Rnf180Q3U827 Olfr1340-201ENSMUST00000094834 951 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Rnf180Q3U827 Spata31d1c-201ENSMUST00000099427 3390 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Rnf180Q3U827 Syne2-201ENSMUST00000044217 21690 ntAPPRIS P2 TSL 5 BASIC4.21□□□□□ -1.74
Rnf180Q3U827 Rgs13-201ENSMUST00000052375 1510 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Rnf180Q3U827 Olfr502-202ENSMUST00000216919 3282 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Rnf180Q3U827 Gm23422-201ENSMUST00000102000 107 ntBASIC4.2□□□□□ -1.74
Rnf180Q3U827 Tcrg-V5-201ENSMUST00000103556 293 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Rnf180Q3U827 Gm11060-201ENSMUST00000111107 72 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Rnf180Q3U827 Gm13868-201ENSMUST00000122411 294 ntBASIC4.2□□□□□ -1.74
Rnf180Q3U827 Gm26171-201ENSMUST00000158422 131 ntBASIC4.2□□□□□ -1.74
Rnf180Q3U827 Gm15914-201ENSMUST00000161922 309 ntBASIC4.2□□□□□ -1.74
Rnf180Q3U827 Gm17187-201ENSMUST00000164622 410 ntBASIC4.2□□□□□ -1.74
Rnf180Q3U827 4930518C09Rik-201ENSMUST00000172700 478 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Rnf180Q3U827 Gm27608-201ENSMUST00000184822 162 ntBASIC4.2□□□□□ -1.74
Rnf180Q3U827 Gm5368-201ENSMUST00000189012 589 ntBASIC4.2□□□□□ -1.74
Rnf180Q3U827 Gm21088-201ENSMUST00000190875 316 ntBASIC4.2□□□□□ -1.74
Rnf180Q3U827 Igkv9-128-201ENSMUST00000196602 353 ntBASIC4.2□□□□□ -1.74
Rnf180Q3U827 n-TSaga9-201ENSMUST00000197675 107 ntBASIC4.2□□□□□ -1.74
Rnf180Q3U827 Gm44083-201ENSMUST00000203114 337 ntBASIC4.2□□□□□ -1.74
Rnf180Q3U827 Gm44825-201ENSMUST00000207557 150 ntBASIC4.2□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 90.9 ms