Protein–RNA interactions for Protein: Q2UY11

Col28a1, Collagen alpha-1(XXVIII) chain, mousemouse

Predictions only

Length 1,141 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col28a1Q2UY11 Gm13698-201ENSMUST00000178325 732 ntTSL 5 BASIC3.28□□□□□ -1.88
Col28a1Q2UY11 Gm13694-202ENSMUST00000178655 732 ntTSL 5 BASIC3.28□□□□□ -1.88
Col28a1Q2UY11 Gm13696-201ENSMUST00000179311 732 ntTSL 5 BASIC3.28□□□□□ -1.88
Col28a1Q2UY11 Gm13693-202ENSMUST00000179448 732 ntTSL 5 BASIC3.28□□□□□ -1.88
Col28a1Q2UY11 Gm28010-201ENSMUST00000179485 126 ntBASIC3.28□□□□□ -1.88
Col28a1Q2UY11 Gm13695-202ENSMUST00000179504 732 ntTSL 5 BASIC3.28□□□□□ -1.88
Col28a1Q2UY11 Gm13697-202ENSMUST00000179552 732 ntTSL 5 BASIC3.28□□□□□ -1.88
Col28a1Q2UY11 Gm27580-201ENSMUST00000183666 149 ntBASIC3.28□□□□□ -1.88
Col28a1Q2UY11 Gm21673-201ENSMUST00000186640 436 ntBASIC3.28□□□□□ -1.88
Col28a1Q2UY11 Scgb2b29-ps-201ENSMUST00000187539 331 ntBASIC3.28□□□□□ -1.88
Col28a1Q2UY11 Gm21135-201ENSMUST00000189023 436 ntBASIC3.28□□□□□ -1.88
Col28a1Q2UY11 Gm37746-201ENSMUST00000193249 198 ntBASIC3.28□□□□□ -1.88
Col28a1Q2UY11 Gm45508-201ENSMUST00000209298 299 ntBASIC3.28□□□□□ -1.88
Col28a1Q2UY11 Gm45365-201ENSMUST00000209489 256 ntBASIC3.28□□□□□ -1.88
Col28a1Q2UY11 AC114575.1-201ENSMUST00000218634 353 ntTSL 3 BASIC3.28□□□□□ -1.88
Col28a1Q2UY11 Olfr6-204ENSMUST00000219365 951 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Col28a1Q2UY11 CT009718.4-201ENSMUST00000221881 109 ntBASIC3.28□□□□□ -1.88
Col28a1Q2UY11 AC133156.1-202ENSMUST00000227284 363 ntBASIC3.28□□□□□ -1.88
Col28a1Q2UY11 Mir101b-201ENSMUST00000083622 97 ntBASIC3.28□□□□□ -1.88
Col28a1Q2UY11 C87414-206ENSMUST00000162964 2852 ntAPPRIS P2 TSL 1 (best) BASIC3.28□□□□□ -1.88
Col28a1Q2UY11 AC155830.1-201ENSMUST00000220050 3836 ntBASIC3.28□□□□□ -1.88
Col28a1Q2UY11 Olfr1185-ps1-201ENSMUST00000075025 3344 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Col28a1Q2UY11 Olfr1404-202ENSMUST00000216556 3305 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Col28a1Q2UY11 Krtap24-1-201ENSMUST00000052512 1571 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
Col28a1Q2UY11 Gm22831-201ENSMUST00000102473 109 ntBASIC3.27□□□□□ -1.89
Col28a1Q2UY11 Rpl31-ps22-201ENSMUST00000117961 337 ntBASIC3.27□□□□□ -1.89
Col28a1Q2UY11 Gm13880-201ENSMUST00000118421 474 ntBASIC3.27□□□□□ -1.89
Col28a1Q2UY11 Gm15026-201ENSMUST00000119219 458 ntBASIC3.27□□□□□ -1.89
Col28a1Q2UY11 Hmgb1-ps6-201ENSMUST00000119503 616 ntBASIC3.27□□□□□ -1.89
Col28a1Q2UY11 Gemin6-ps-201ENSMUST00000120444 501 ntBASIC3.27□□□□□ -1.89
Col28a1Q2UY11 Gm13692-201ENSMUST00000120774 371 ntBASIC3.27□□□□□ -1.89
Col28a1Q2UY11 Gm12729-201ENSMUST00000130088 624 ntTSL 3 BASIC3.27□□□□□ -1.89
Col28a1Q2UY11 Gm15733-201ENSMUST00000132957 242 ntBASIC3.27□□□□□ -1.89
Col28a1Q2UY11 Gm13943-201ENSMUST00000144043 343 ntTSL 5 BASIC3.27□□□□□ -1.89
Col28a1Q2UY11 Gm14041-201ENSMUST00000150181 276 ntTSL 3 BASIC3.27□□□□□ -1.89
Col28a1Q2UY11 A630050E04Rik-201ENSMUST00000151443 581 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
Col28a1Q2UY11 Gm22034-201ENSMUST00000157283 134 ntBASIC3.27□□□□□ -1.89
Col28a1Q2UY11 Gm25362-201ENSMUST00000158854 105 ntBASIC3.27□□□□□ -1.89
Col28a1Q2UY11 Gm17062-201ENSMUST00000166987 461 ntBASIC3.27□□□□□ -1.89
Col28a1Q2UY11 Gm20526-201ENSMUST00000173416 158 ntBASIC3.27□□□□□ -1.89
Col28a1Q2UY11 Gm21842-201ENSMUST00000177552 498 ntBASIC3.27□□□□□ -1.89
Col28a1Q2UY11 Gm21626-201ENSMUST00000177791 498 ntBASIC3.27□□□□□ -1.89
Col28a1Q2UY11 Gm21562-201ENSMUST00000177888 498 ntBASIC3.27□□□□□ -1.89
Col28a1Q2UY11 Gm21539-201ENSMUST00000177925 498 ntBASIC3.27□□□□□ -1.89
Col28a1Q2UY11 Gm21599-201ENSMUST00000178249 498 ntBASIC3.27□□□□□ -1.89
Col28a1Q2UY11 Gm21874-201ENSMUST00000178374 699 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
Col28a1Q2UY11 Gm21914-201ENSMUST00000178452 498 ntBASIC3.27□□□□□ -1.89
Col28a1Q2UY11 Gm21723-201ENSMUST00000178692 498 ntBASIC3.27□□□□□ -1.89
Col28a1Q2UY11 Gm21916-201ENSMUST00000178771 498 ntBASIC3.27□□□□□ -1.89
Col28a1Q2UY11 Gm4479-201ENSMUST00000178807 171 ntBASIC3.27□□□□□ -1.89
Col28a1Q2UY11 Gm21801-201ENSMUST00000178865 498 ntBASIC3.27□□□□□ -1.89
Col28a1Q2UY11 Gm21633-201ENSMUST00000178941 498 ntBASIC3.27□□□□□ -1.89
Col28a1Q2UY11 Gm21821-201ENSMUST00000179646 498 ntBASIC3.27□□□□□ -1.89
Col28a1Q2UY11 Gm21588-201ENSMUST00000180074 498 ntBASIC3.27□□□□□ -1.89
Col28a1Q2UY11 Gm21780-201ENSMUST00000180128 498 ntBASIC3.27□□□□□ -1.89
Col28a1Q2UY11 Gm21572-201ENSMUST00000180134 498 ntBASIC3.27□□□□□ -1.89
Col28a1Q2UY11 Gm21529-201ENSMUST00000180175 498 ntBASIC3.27□□□□□ -1.89
Col28a1Q2UY11 Gm28399-201ENSMUST00000186221 318 ntBASIC3.27□□□□□ -1.89
Col28a1Q2UY11 Gm28163-201ENSMUST00000187099 325 ntBASIC3.27□□□□□ -1.89
Col28a1Q2UY11 Gm28572-201ENSMUST00000187444 318 ntBASIC3.27□□□□□ -1.89
Col28a1Q2UY11 Gm29370-202ENSMUST00000187476 499 ntBASIC3.27□□□□□ -1.89
Col28a1Q2UY11 Gm29365-201ENSMUST00000189461 699 ntBASIC3.27□□□□□ -1.89
Col28a1Q2UY11 2610044O15Rik8-206ENSMUST00000191043 504 ntTSL 2 BASIC3.27□□□□□ -1.89
Col28a1Q2UY11 Gm44419-201ENSMUST00000203338 229 ntBASIC3.27□□□□□ -1.89
Col28a1Q2UY11 Gm45395-201ENSMUST00000209891 559 ntBASIC3.27□□□□□ -1.89
Col28a1Q2UY11 Gm45616-201ENSMUST00000211711 319 ntBASIC3.27□□□□□ -1.89
Col28a1Q2UY11 AL450317.1-201ENSMUST00000213941 291 ntBASIC3.27□□□□□ -1.89
Col28a1Q2UY11 AC087891.1-201ENSMUST00000217867 318 ntTSL 5 BASIC3.27□□□□□ -1.89
Col28a1Q2UY11 AC152979.1-201ENSMUST00000218214 289 ntBASIC3.27□□□□□ -1.89
Col28a1Q2UY11 AC124346.1-201ENSMUST00000218539 364 ntBASIC3.27□□□□□ -1.89
Col28a1Q2UY11 Gm33424-201ENSMUST00000222317 257 ntTSL 5 BASIC3.27□□□□□ -1.89
Col28a1Q2UY11 AC154576.2-202ENSMUST00000223916 688 ntBASIC3.27□□□□□ -1.89
Col28a1Q2UY11 Gm23645-201ENSMUST00000083228 108 ntBASIC3.27□□□□□ -1.89
Col28a1Q2UY11 Gm23455-201ENSMUST00000083331 100 ntBASIC3.27□□□□□ -1.89
Col28a1Q2UY11 Gm22740-201ENSMUST00000083439 109 ntBASIC3.27□□□□□ -1.89
Col28a1Q2UY11 Olfr1104-202ENSMUST00000214857 2693 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Col28a1Q2UY11 Serpina7-201ENSMUST00000033626 2330 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Col28a1Q2UY11 Vmn1r34-205ENSMUST00000227332 3075 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
Col28a1Q2UY11 Gm8473-201ENSMUST00000176697 1885 ntBASIC3.26□□□□□ -1.89
Col28a1Q2UY11 Neurod4-201ENSMUST00000061571 3345 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
Col28a1Q2UY11 Gm3956-201ENSMUST00000164882 2560 ntBASIC3.26□□□□□ -1.89
Col28a1Q2UY11 Vmn2r36-201ENSMUST00000170402 2561 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
Col28a1Q2UY11 Gm45662-201ENSMUST00000210054 2098 ntBASIC3.26□□□□□ -1.89
Col28a1Q2UY11 Olfr17-202ENSMUST00000210568 3666 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
Col28a1Q2UY11 Olfr1043-203ENSMUST00000213949 1778 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
Col28a1Q2UY11 Ighv3-1-201ENSMUST00000103478 350 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
Col28a1Q2UY11 Prl3c1-202ENSMUST00000110364 850 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
Col28a1Q2UY11 Gm11598-201ENSMUST00000119257 357 ntBASIC3.26□□□□□ -1.89
Col28a1Q2UY11 Gm15112-201ENSMUST00000120152 860 ntBASIC3.26□□□□□ -1.89
Col28a1Q2UY11 Gm14269-201ENSMUST00000120455 306 ntBASIC3.26□□□□□ -1.89
Col28a1Q2UY11 Gm22718-201ENSMUST00000122701 315 ntBASIC3.26□□□□□ -1.89
Col28a1Q2UY11 Gm15671-201ENSMUST00000124160 576 ntTSL 5 BASIC3.26□□□□□ -1.89
Col28a1Q2UY11 Gm23755-201ENSMUST00000157578 343 ntBASIC3.26□□□□□ -1.89
Col28a1Q2UY11 Gm23775-201ENSMUST00000158991 249 ntBASIC3.26□□□□□ -1.89
Col28a1Q2UY11 Gm3027-201ENSMUST00000167579 451 ntBASIC3.26□□□□□ -1.89
Col28a1Q2UY11 Gm3104-201ENSMUST00000171004 473 ntBASIC3.26□□□□□ -1.89
Col28a1Q2UY11 Gm21746-201ENSMUST00000177612 543 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
Col28a1Q2UY11 Gm22263-201ENSMUST00000180060 104 ntBASIC3.26□□□□□ -1.89
Col28a1Q2UY11 Gm27699-201ENSMUST00000183553 180 ntBASIC3.26□□□□□ -1.89
Col28a1Q2UY11 Gm29012-201ENSMUST00000187882 469 ntTSL 3 BASIC3.26□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 85.7 ms