Protein–RNA interactions for Protein: Q04857

Col6a1, Collagen alpha-1(VI) chain, mousemouse

Predictions only

Length 1,025 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1Q04857 Vmn1r184-204ENSMUST00000227534 4807 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Col6a1Q04857 Gm4631-202ENSMUST00000121393 4402 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
Col6a1Q04857 Fscb-201ENSMUST00000059833 3361 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Col6a1Q04857 Kcnb2-201ENSMUST00000170146 14845 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Col6a1Q04857 Olfr1126-202ENSMUST00000213366 1827 ntAPPRIS P1 TSL 3 BASIC4.51□□□□□ -1.69
Col6a1Q04857 Olfr128-202ENSMUST00000216440 3644 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Col6a1Q04857 Cntn3-201ENSMUST00000032159 5183 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
Col6a1Q04857 Mir541-201ENSMUST00000102097 90 ntBASIC4.51□□□□□ -1.69
Col6a1Q04857 Gm12722-201ENSMUST00000118507 493 ntBASIC4.51□□□□□ -1.69
Col6a1Q04857 Gm14714-201ENSMUST00000119743 439 ntBASIC4.51□□□□□ -1.69
Col6a1Q04857 Gm11785-201ENSMUST00000120165 601 ntBASIC4.51□□□□□ -1.69
Col6a1Q04857 Gm15461-201ENSMUST00000143488 235 ntTSL 3 BASIC4.51□□□□□ -1.69
Col6a1Q04857 Gm17364-201ENSMUST00000163881 72 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Col6a1Q04857 Clec9a-203ENSMUST00000164513 714 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
Col6a1Q04857 Vmn1r-ps40-201ENSMUST00000172862 343 ntBASIC4.51□□□□□ -1.69
Col6a1Q04857 Gm26979-201ENSMUST00000182971 217 ntTSL 3 BASIC4.51□□□□□ -1.69
Col6a1Q04857 Gm17916-203ENSMUST00000189918 324 ntTSL 5 BASIC4.51□□□□□ -1.69
Col6a1Q04857 Gm29330-201ENSMUST00000190032 699 ntBASIC4.51□□□□□ -1.69
Col6a1Q04857 Gm37898-201ENSMUST00000193781 174 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Col6a1Q04857 Gm29704-201ENSMUST00000196011 253 ntBASIC4.51□□□□□ -1.69
Col6a1Q04857 Gm44324-201ENSMUST00000198517 135 ntBASIC4.51□□□□□ -1.69
Col6a1Q04857 Gm45513-201ENSMUST00000210228 376 ntBASIC4.51□□□□□ -1.69
Col6a1Q04857 AC123618.1-201ENSMUST00000220174 360 ntBASIC4.51□□□□□ -1.69
Col6a1Q04857 Gm23510-201ENSMUST00000083083 163 ntBASIC4.51□□□□□ -1.69
Col6a1Q04857 Gm10719-202ENSMUST00000099049 675 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
Col6a1Q04857 Gm10720-201ENSMUST00000099050 669 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Col6a1Q04857 Olfr1019-202ENSMUST00000213515 3031 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Col6a1Q04857 CAAA01194877.1-201ENSMUST00000213137 4233 ntBASIC4.51□□□□□ -1.69
Col6a1Q04857 Gm37792-201ENSMUST00000195761 3413 ntBASIC4.51□□□□□ -1.69
Col6a1Q04857 Olfr1467-202ENSMUST00000215096 3671 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Col6a1Q04857 Olfr1226-206ENSMUST00000217601 2670 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Col6a1Q04857 4930562D21Rik-201ENSMUST00000123894 1750 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Col6a1Q04857 Mcmdc2-204ENSMUST00000140948 3249 ntTSL 5 BASIC4.5□□□□□ -1.69
Col6a1Q04857 Olfr613-201ENSMUST00000106888 5139 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Col6a1Q04857 Olfr1251-202ENSMUST00000214639 3071 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Col6a1Q04857 Vmn1r51-205ENSMUST00000227109 4214 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Col6a1Q04857 Gm35191-201ENSMUST00000200925 2475 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Col6a1Q04857 Rpl30-ps10-201ENSMUST00000117119 347 ntBASIC4.5□□□□□ -1.69
Col6a1Q04857 Rpl30-ps3-201ENSMUST00000117928 348 ntBASIC4.5□□□□□ -1.69
Col6a1Q04857 Gm12191-201ENSMUST00000118307 348 ntBASIC4.5□□□□□ -1.69
Col6a1Q04857 Gm9703-201ENSMUST00000119573 343 ntBASIC4.5□□□□□ -1.69
Col6a1Q04857 Rpl30-ps11-201ENSMUST00000119630 345 ntBASIC4.5□□□□□ -1.69
Col6a1Q04857 Rpl30-ps1-201ENSMUST00000119767 348 ntBASIC4.5□□□□□ -1.69
Col6a1Q04857 Gm10075-201ENSMUST00000162030 545 ntBASIC4.5□□□□□ -1.69
Col6a1Q04857 Rpl26-ps4-201ENSMUST00000170279 438 ntBASIC4.5□□□□□ -1.69
Col6a1Q04857 Gm26195-201ENSMUST00000175035 101 ntBASIC4.5□□□□□ -1.69
Col6a1Q04857 Mir6993-201ENSMUST00000184912 65 ntBASIC4.5□□□□□ -1.69
Col6a1Q04857 2610044O15Rik8-203ENSMUST00000188757 413 ntTSL 2 BASIC4.5□□□□□ -1.69
Col6a1Q04857 Gm37089-201ENSMUST00000195616 129 ntBASIC4.5□□□□□ -1.69
Col6a1Q04857 Rpl36a-ps2-201ENSMUST00000197973 321 ntBASIC4.5□□□□□ -1.69
Col6a1Q04857 Gm35702-201ENSMUST00000198653 511 ntBASIC4.5□□□□□ -1.69
Col6a1Q04857 Gm44076-201ENSMUST00000203072 520 ntBASIC4.5□□□□□ -1.69
Col6a1Q04857 AC115034.1-201ENSMUST00000215393 3846 ntBASIC4.5□□□□□ -1.69
Col6a1Q04857 AC156632.1-201ENSMUST00000220626 3845 ntBASIC4.5□□□□□ -1.69
Col6a1Q04857 AC127270.2-201ENSMUST00000221337 247 ntBASIC4.5□□□□□ -1.69
Col6a1Q04857 Rpl30-ps8-201ENSMUST00000076166 345 ntBASIC4.5□□□□□ -1.69
Col6a1Q04857 Mir471-201ENSMUST00000093596 67 ntBASIC4.5□□□□□ -1.69
Col6a1Q04857 Gm10343-201ENSMUST00000096279 348 ntBASIC4.5□□□□□ -1.69
Col6a1Q04857 Oog1-201ENSMUST00000095509 1801 ntAPPRIS P2 TSL 1 (best) BASIC4.5□□□□□ -1.69
Col6a1Q04857 Gm3972-201ENSMUST00000173960 2861 ntBASIC4.5□□□□□ -1.69
Col6a1Q04857 4930524B17Rik-201ENSMUST00000200755 1870 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Col6a1Q04857 Vmn1r215-202ENSMUST00000228092 2790 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
Col6a1Q04857 Mmrn1-201ENSMUST00000129603 4477 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
Col6a1Q04857 AC153563.1-202ENSMUST00000217695 1838 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Col6a1Q04857 Vmn1r171-203ENSMUST00000226321 3067 ntAPPRIS ALT2 BASIC4.49□□□□□ -1.69
Col6a1Q04857 Gm10811-201ENSMUST00000221985 2448 ntBASIC4.49□□□□□ -1.69
Col6a1Q04857 Gm15244-201ENSMUST00000121122 130 ntBASIC4.49□□□□□ -1.69
Col6a1Q04857 5330434G04Rik-201ENSMUST00000130264 511 ntTSL 3 BASIC4.49□□□□□ -1.69
Col6a1Q04857 Gm22320-201ENSMUST00000157149 312 ntBASIC4.49□□□□□ -1.69
Col6a1Q04857 Gm22145-201ENSMUST00000157396 148 ntBASIC4.49□□□□□ -1.69
Col6a1Q04857 Gm23084-201ENSMUST00000157850 114 ntBASIC4.49□□□□□ -1.69
Col6a1Q04857 Gm7241-201ENSMUST00000159853 357 ntBASIC4.49□□□□□ -1.69
Col6a1Q04857 Gm27545-201ENSMUST00000184755 202 ntBASIC4.49□□□□□ -1.69
Col6a1Q04857 Rpl18a-ps2-201ENSMUST00000197158 174 ntBASIC4.49□□□□□ -1.69
Col6a1Q04857 Igkv14-118-2-201ENSMUST00000198287 339 ntBASIC4.49□□□□□ -1.69
Col6a1Q04857 Igkv14-126-1-201ENSMUST00000199899 346 ntBASIC4.49□□□□□ -1.69
Col6a1Q04857 Gm42578-201ENSMUST00000199960 194 ntBASIC4.49□□□□□ -1.69
Col6a1Q04857 4930431L21Rik-202ENSMUST00000200253 624 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Col6a1Q04857 Gm43028-201ENSMUST00000202561 481 ntBASIC4.49□□□□□ -1.69
Col6a1Q04857 Gm45245-201ENSMUST00000210082 376 ntBASIC4.49□□□□□ -1.69
Col6a1Q04857 LOC667541-201ENSMUST00000223408 278 ntBASIC4.49□□□□□ -1.69
Col6a1Q04857 Olfr1009-201ENSMUST00000055517 945 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
Col6a1Q04857 Gm23932-201ENSMUST00000082914 107 ntBASIC4.49□□□□□ -1.69
Col6a1Q04857 Gm24611-201ENSMUST00000083272 107 ntBASIC4.49□□□□□ -1.69
Col6a1Q04857 Gm23041-201ENSMUST00000083868 106 ntBASIC4.49□□□□□ -1.69
Col6a1Q04857 n-R5s151-201ENSMUST00000083959 119 ntBASIC4.49□□□□□ -1.69
Col6a1Q04857 AC154481.2-201ENSMUST00000222526 3175 ntBASIC4.49□□□□□ -1.69
Col6a1Q04857 Olfr785-201ENSMUST00000204402 2014 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Col6a1Q04857 3110080E11Rik-201ENSMUST00000210736 3477 ntBASIC4.49□□□□□ -1.69
Col6a1Q04857 Vmn1r184-202ENSMUST00000227230 7999 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
Col6a1Q04857 2810403D21Rik-202ENSMUST00000124329 1660 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Col6a1Q04857 Atrx-202ENSMUST00000113573 10275 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Col6a1Q04857 Gda-202ENSMUST00000121725 2450 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Col6a1Q04857 Gm25272-201ENSMUST00000104293 128 ntBASIC4.48□□□□□ -1.69
Col6a1Q04857 Gm11367-201ENSMUST00000117802 120 ntBASIC4.48□□□□□ -1.69
Col6a1Q04857 Gm14846-201ENSMUST00000121868 216 ntBASIC4.48□□□□□ -1.69
Col6a1Q04857 Tshb-202ENSMUST00000170856 552 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Col6a1Q04857 Cox6b2-208ENSMUST00000183971 401 ntTSL 5 BASIC4.48□□□□□ -1.69
Col6a1Q04857 Gm36946-201ENSMUST00000192706 435 ntBASIC4.48□□□□□ -1.69
Col6a1Q04857 Gm37239-201ENSMUST00000193510 141 ntBASIC4.48□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 99.4 ms