Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Gm20345-201ENSMUST00000175839 2414 ntBASIC2.43□□□□□ -2.02
Sox3P53784 Gm14579-201ENSMUST00000117068 283 ntBASIC2.43□□□□□ -2.02
Sox3P53784 Gm8217-201ENSMUST00000119136 465 ntBASIC2.43□□□□□ -2.02
Sox3P53784 Gm15760-201ENSMUST00000119553 283 ntBASIC2.43□□□□□ -2.02
Sox3P53784 Gm6574-201ENSMUST00000120037 362 ntBASIC2.43□□□□□ -2.02
Sox3P53784 Gm15223-201ENSMUST00000120989 826 ntBASIC2.43□□□□□ -2.02
Sox3P53784 Gm11389-201ENSMUST00000121407 430 ntBASIC2.43□□□□□ -2.02
Sox3P53784 Gm11819-201ENSMUST00000122192 372 ntBASIC2.43□□□□□ -2.02
Sox3P53784 1700071G01Rik-201ENSMUST00000146728 367 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
Sox3P53784 Gm24784-201ENSMUST00000157640 62 ntBASIC2.43□□□□□ -2.02
Sox3P53784 Gm22839-201ENSMUST00000158436 304 ntBASIC2.43□□□□□ -2.02
Sox3P53784 Gm21746-201ENSMUST00000177612 543 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
Sox3P53784 Gm27399-201ENSMUST00000184250 78 ntBASIC2.43□□□□□ -2.02
Sox3P53784 Gm27369-201ENSMUST00000185182 71 ntBASIC2.43□□□□□ -2.02
Sox3P53784 Gm28283-201ENSMUST00000185509 178 ntBASIC2.43□□□□□ -2.02
Sox3P53784 Gm7329-201ENSMUST00000185915 210 ntBASIC2.43□□□□□ -2.02
Sox3P53784 Gm28384-201ENSMUST00000189079 463 ntBASIC2.43□□□□□ -2.02
Sox3P53784 Sly-201ENSMUST00000189109 797 ntAPPRIS ALT2 TSL 1 (best) BASIC2.43□□□□□ -2.02
Sox3P53784 Gm9696-202ENSMUST00000191541 830 ntBASIC2.43□□□□□ -2.02
Sox3P53784 4930449A18Rik-202ENSMUST00000192453 1200 ntBASIC2.43□□□□□ -2.02
Sox3P53784 Gm38333-201ENSMUST00000193608 604 ntBASIC2.43□□□□□ -2.02
Sox3P53784 Gm37850-201ENSMUST00000194573 549 ntTSL 5 BASIC2.43□□□□□ -2.02
Sox3P53784 Gm42425-201ENSMUST00000197756 565 ntTSL 5 BASIC2.43□□□□□ -2.02
Sox3P53784 Gm43512-201ENSMUST00000198495 176 ntBASIC2.43□□□□□ -2.02
Sox3P53784 Gm44477-201ENSMUST00000199661 110 ntBASIC2.43□□□□□ -2.02
Sox3P53784 Gm45232-201ENSMUST00000207811 162 ntBASIC2.43□□□□□ -2.02
Sox3P53784 Olfr929-ps1-201ENSMUST00000216338 585 ntBASIC2.43□□□□□ -2.02
Sox3P53784 AC122341.1-201ENSMUST00000227291 560 ntBASIC2.43□□□□□ -2.02
Sox3P53784 AC144628.1-201ENSMUST00000227943 466 ntBASIC2.43□□□□□ -2.02
Sox3P53784 Defb10-201ENSMUST00000054162 298 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
Sox3P53784 Olfr967-201ENSMUST00000069561 933 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
Sox3P53784 Gm5471-201ENSMUST00000072732 337 ntBASIC2.43□□□□□ -2.02
Sox3P53784 Mir208a-201ENSMUST00000083498 83 ntBASIC2.43□□□□□ -2.02
Sox3P53784 Gm25411-201ENSMUST00000083760 151 ntBASIC2.43□□□□□ -2.02
Sox3P53784 Olfr893-201ENSMUST00000093867 942 ntAPPRIS P2 BASIC2.43□□□□□ -2.02
Sox3P53784 Gm5800-201ENSMUST00000095916 903 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
Sox3P53784 Gm23741-201ENSMUST00000097237 171 ntBASIC2.43□□□□□ -2.02
Sox3P53784 AC125223.3-201ENSMUST00000223588 2067 ntBASIC2.43□□□□□ -2.02
Sox3P53784 CT025538.3-201ENSMUST00000225279 3848 ntBASIC2.43□□□□□ -2.02
Sox3P53784 Olfr835-202ENSMUST00000213018 2690 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
Sox3P53784 Vmn1r76-203ENSMUST00000226947 8145 ntAPPRIS ALT2 BASIC2.43□□□□□ -2.02
Sox3P53784 Hif1a-202ENSMUST00000110461 4385 ntAPPRIS ALT2 TSL 1 (best) BASIC2.42□□□□□ -2.02
Sox3P53784 Olfr1487-203ENSMUST00000209005 2061 ntTSL 3 BASIC2.42□□□□□ -2.02
Sox3P53784 Gm23950-201ENSMUST00000104026 129 ntBASIC2.42□□□□□ -2.02
Sox3P53784 Snora36b-201ENSMUST00000104383 132 ntBASIC2.42□□□□□ -2.02
Sox3P53784 Mir878-201ENSMUST00000104680 78 ntBASIC2.42□□□□□ -2.02
Sox3P53784 Gm11221-201ENSMUST00000117230 597 ntBASIC2.42□□□□□ -2.02
Sox3P53784 Gm2066-201ENSMUST00000118046 389 ntBASIC2.42□□□□□ -2.02
Sox3P53784 Gm14897-201ENSMUST00000118213 207 ntBASIC2.42□□□□□ -2.02
Sox3P53784 Oosp2-202ENSMUST00000135994 453 ntAPPRIS ALT2 TSL 3 BASIC2.42□□□□□ -2.02
Sox3P53784 Gm28305-201ENSMUST00000147249 365 ntAPPRIS P1 TSL 2 BASIC2.42□□□□□ -2.02
Sox3P53784 Gm24475-201ENSMUST00000157435 143 ntBASIC2.42□□□□□ -2.02
Sox3P53784 Ear10-202ENSMUST00000163652 471 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
Sox3P53784 Gm5168-202ENSMUST00000168002 636 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
Sox3P53784 Gm5935-202ENSMUST00000178986 639 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
Sox3P53784 2310010J17Rik-201ENSMUST00000181189 490 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
Sox3P53784 Gtpbp4-ps5-201ENSMUST00000184969 289 ntBASIC2.42□□□□□ -2.02
Sox3P53784 Gm28755-201ENSMUST00000185773 199 ntBASIC2.42□□□□□ -2.02
Sox3P53784 1810022K09Rik-204ENSMUST00000186870 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC2.42□□□□□ -2.02
Sox3P53784 Gm44324-201ENSMUST00000198517 135 ntBASIC2.42□□□□□ -2.02
Sox3P53784 Gm45387-201ENSMUST00000209792 632 ntBASIC2.42□□□□□ -2.02
Sox3P53784 Gm45240-201ENSMUST00000211437 674 ntBASIC2.42□□□□□ -2.02
Sox3P53784 AC116656.1-201ENSMUST00000227040 755 ntBASIC2.42□□□□□ -2.02
Sox3P53784 AC117202.3-201ENSMUST00000228532 310 ntBASIC2.42□□□□□ -2.02
Sox3P53784 2010106E10Rik-201ENSMUST00000026602 1257 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
Sox3P53784 Olfr896-ps1-203ENSMUST00000216276 2921 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
Sox3P53784 AC167192.3-201ENSMUST00000224096 1567 ntBASIC2.41□□□□□ -2.02
Sox3P53784 Olfr623-202ENSMUST00000213840 3980 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
Sox3P53784 Vmn1r185-211ENSMUST00000228467 6915 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
Sox3P53784 Gm19965-201ENSMUST00000179777 3030 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
Sox3P53784 Igkv8-16-201ENSMUST00000103392 362 ntAPPRIS ALT2 BASIC2.41□□□□□ -2.02
Sox3P53784 Gm24670-201ENSMUST00000104154 132 ntBASIC2.41□□□□□ -2.02
Sox3P53784 Gm25563-201ENSMUST00000104603 74 ntBASIC2.41□□□□□ -2.02
Sox3P53784 Gm13343-201ENSMUST00000116474 105 ntBASIC2.41□□□□□ -2.02
Sox3P53784 Gm13510-201ENSMUST00000118659 429 ntBASIC2.41□□□□□ -2.02
Sox3P53784 Gm14899-201ENSMUST00000118673 548 ntBASIC2.41□□□□□ -2.02
Sox3P53784 Gm1993-201ENSMUST00000120268 1131 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
Sox3P53784 AA413626-201ENSMUST00000121125 494 ntBASIC2.41□□□□□ -2.02
Sox3P53784 Gm15167-201ENSMUST00000121997 187 ntBASIC2.41□□□□□ -2.02
Sox3P53784 Gm22257-201ENSMUST00000158687 301 ntBASIC2.41□□□□□ -2.02
Sox3P53784 Gm17064-201ENSMUST00000167690 452 ntBASIC2.41□□□□□ -2.02
Sox3P53784 Gm20513-201ENSMUST00000174074 537 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
Sox3P53784 Gm24757-201ENSMUST00000176987 371 ntBASIC2.41□□□□□ -2.02
Sox3P53784 Gm22716-201ENSMUST00000177596 107 ntBASIC2.41□□□□□ -2.02
Sox3P53784 Gm22290-201ENSMUST00000177655 107 ntBASIC2.41□□□□□ -2.02
Sox3P53784 Gm22583-201ENSMUST00000178031 107 ntBASIC2.41□□□□□ -2.02
Sox3P53784 Gm27786-201ENSMUST00000184337 70 ntBASIC2.41□□□□□ -2.02
Sox3P53784 Igkv14-118-1-201ENSMUST00000198645 334 ntBASIC2.41□□□□□ -2.02
Sox3P53784 Gm31752-201ENSMUST00000199456 856 ntTSL 2 BASIC2.41□□□□□ -2.02
Sox3P53784 Gm42475-201ENSMUST00000201212 295 ntBASIC2.41□□□□□ -2.02
Sox3P53784 Gm44609-201ENSMUST00000207157 460 ntBASIC2.41□□□□□ -2.02
Sox3P53784 Olfr953-ps1-201ENSMUST00000214463 892 ntBASIC2.41□□□□□ -2.02
Sox3P53784 AC157654.1-201ENSMUST00000224130 820 ntBASIC2.41□□□□□ -2.02
Sox3P53784 AC170810.3-201ENSMUST00000226177 374 ntBASIC2.41□□□□□ -2.02
Sox3P53784 AC166344.2-201ENSMUST00000226747 374 ntBASIC2.41□□□□□ -2.02
Sox3P53784 Olfr1370-201ENSMUST00000058168 951 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
Sox3P53784 Defb39-201ENSMUST00000075504 252 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
Sox3P53784 Zfp934-201ENSMUST00000082203 993 ntTSL 5 BASIC2.41□□□□□ -2.02
Sox3P53784 Gm25130-201ENSMUST00000082650 156 ntBASIC2.41□□□□□ -2.02
Sox3P53784 Gm22974-201ENSMUST00000083301 103 ntBASIC2.41□□□□□ -2.02
Retrieved 100 of 76,532 protein–RNA pairs in 90.5 ms