Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 2210418O10Rik-204ENSMUST00000166464 750 ntBASIC3.82□□□□□ -1.8
Shmt1P50431 Gm43614-201ENSMUST00000197030 517 ntTSL 2 BASIC3.82□□□□□ -1.8
Shmt1P50431 Gm42672-201ENSMUST00000197821 352 ntBASIC3.82□□□□□ -1.8
Shmt1P50431 Gm45678-201ENSMUST00000210509 295 ntBASIC3.82□□□□□ -1.8
Shmt1P50431 AC164161.1-201ENSMUST00000214076 639 ntBASIC3.82□□□□□ -1.8
Shmt1P50431 Gm46997-201ENSMUST00000222108 217 ntBASIC3.82□□□□□ -1.8
Shmt1P50431 AC162934.1-201ENSMUST00000222880 309 ntBASIC3.82□□□□□ -1.8
Shmt1P50431 AC129541.1-201ENSMUST00000226940 523 ntBASIC3.82□□□□□ -1.8
Shmt1P50431 Gm4987-201ENSMUST00000078326 408 ntBASIC3.82□□□□□ -1.8
Shmt1P50431 Gm26121-201ENSMUST00000083364 162 ntBASIC3.82□□□□□ -1.8
Shmt1P50431 A230057D06Rik-202ENSMUST00000207061 3717 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Shmt1P50431 Gm42993-201ENSMUST00000196856 7325 ntBASIC3.82□□□□□ -1.8
Shmt1P50431 Olfr913-201ENSMUST00000081095 2441 ntAPPRIS P1 TSL 3 BASIC3.82□□□□□ -1.8
Shmt1P50431 Olfr1309-203ENSMUST00000214935 5448 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Shmt1P50431 Olfr109-204ENSMUST00000217602 5437 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Shmt1P50431 AC102369.2-201ENSMUST00000219725 1679 ntBASIC3.81□□□□□ -1.8
Shmt1P50431 AC123035.1-201ENSMUST00000213846 2671 ntTSL 5 BASIC3.81□□□□□ -1.8
Shmt1P50431 Trav16n-201ENSMUST00000103633 353 ntAPPRIS ALT2 BASIC3.81□□□□□ -1.8
Shmt1P50431 Gm24127-201ENSMUST00000104110 130 ntBASIC3.81□□□□□ -1.8
Shmt1P50431 Gm12897-201ENSMUST00000120341 250 ntBASIC3.81□□□□□ -1.8
Shmt1P50431 Gm13396-201ENSMUST00000120617 271 ntBASIC3.81□□□□□ -1.8
Shmt1P50431 Gm14841-201ENSMUST00000121067 758 ntBASIC3.81□□□□□ -1.8
Shmt1P50431 Gm13868-201ENSMUST00000122411 294 ntBASIC3.81□□□□□ -1.8
Shmt1P50431 Gm24818-201ENSMUST00000175093 161 ntBASIC3.81□□□□□ -1.8
Shmt1P50431 Ptma-ps1-201ENSMUST00000181079 309 ntBASIC3.81□□□□□ -1.8
Shmt1P50431 Gm27521-201ENSMUST00000184022 64 ntBASIC3.81□□□□□ -1.8
Shmt1P50431 Gm27608-201ENSMUST00000184822 162 ntBASIC3.81□□□□□ -1.8
Shmt1P50431 Gm29242-201ENSMUST00000186570 457 ntTSL 5 BASIC3.81□□□□□ -1.8
Shmt1P50431 Gm28148-201ENSMUST00000186924 697 ntBASIC3.81□□□□□ -1.8
Shmt1P50431 Gm37698-201ENSMUST00000192605 463 ntBASIC3.81□□□□□ -1.8
Shmt1P50431 Gm17966-201ENSMUST00000193453 594 ntBASIC3.81□□□□□ -1.8
Shmt1P50431 Gm32817-202ENSMUST00000210738 527 ntTSL 2 BASIC3.81□□□□□ -1.8
Shmt1P50431 AC173482.4-201ENSMUST00000225096 348 ntBASIC3.81□□□□□ -1.8
Shmt1P50431 mt-Co3-201ENSMUST00000082409 784 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Shmt1P50431 Gm23932-201ENSMUST00000082914 107 ntBASIC3.81□□□□□ -1.8
Shmt1P50431 Gm22974-201ENSMUST00000083301 103 ntBASIC3.81□□□□□ -1.8
Shmt1P50431 Btbd35f5-201ENSMUST00000179538 1950 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Shmt1P50431 Skint4-202ENSMUST00000106564 3997 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
Shmt1P50431 Skint4-204ENSMUST00000106566 3997 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
Shmt1P50431 Calcrl-202ENSMUST00000099944 3973 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Shmt1P50431 Skint3-202ENSMUST00000170945 3843 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
Shmt1P50431 Olfr644-203ENSMUST00000213991 3506 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Shmt1P50431 C87414-206ENSMUST00000162964 2852 ntAPPRIS P2 TSL 1 (best) BASIC3.81□□□□□ -1.8
Shmt1P50431 Gm4567-202ENSMUST00000190554 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Shmt1P50431 Gm10668-202ENSMUST00000191073 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Shmt1P50431 Gm37887-201ENSMUST00000192752 2716 ntBASIC3.8□□□□□ -1.8
Shmt1P50431 Adam29-201ENSMUST00000053441 2726 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Shmt1P50431 Gm21033-201ENSMUST00000208590 2608 ntBASIC3.8□□□□□ -1.8
Shmt1P50431 Gm44435-201ENSMUST00000204379 4119 ntBASIC3.8□□□□□ -1.8
Shmt1P50431 Gm13076-201ENSMUST00000118041 204 ntBASIC3.8□□□□□ -1.8
Shmt1P50431 Gm13273-201ENSMUST00000119737 159 ntBASIC3.8□□□□□ -1.8
Shmt1P50431 Gm12649-201ENSMUST00000137509 581 ntTSL 3 BASIC3.8□□□□□ -1.8
Shmt1P50431 Gm14298-201ENSMUST00000139032 237 ntBASIC3.8□□□□□ -1.8
Shmt1P50431 Gm16356-201ENSMUST00000143300 169 ntBASIC3.8□□□□□ -1.8
Shmt1P50431 Gm5958-201ENSMUST00000147698 297 ntBASIC3.8□□□□□ -1.8
Shmt1P50431 Gm25621-201ENSMUST00000157223 114 ntBASIC3.8□□□□□ -1.8
Shmt1P50431 Gm22336-201ENSMUST00000157719 107 ntBASIC3.8□□□□□ -1.8
Shmt1P50431 Gm23666-201ENSMUST00000158053 116 ntBASIC3.8□□□□□ -1.8
Shmt1P50431 Gm26501-201ENSMUST00000178307 107 ntBASIC3.8□□□□□ -1.8
Shmt1P50431 Gm24862-201ENSMUST00000179103 79 ntBASIC3.8□□□□□ -1.8
Shmt1P50431 Gm23310-201ENSMUST00000179105 79 ntBASIC3.8□□□□□ -1.8
Shmt1P50431 Gm25461-201ENSMUST00000179293 79 ntBASIC3.8□□□□□ -1.8
Shmt1P50431 Gm25939-201ENSMUST00000179876 191 ntBASIC3.8□□□□□ -1.8
Shmt1P50431 Gm29139-201ENSMUST00000185794 248 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Shmt1P50431 Gm36964-201ENSMUST00000191876 198 ntBASIC3.8□□□□□ -1.8
Shmt1P50431 Gm8242-202ENSMUST00000193056 475 ntBASIC3.8□□□□□ -1.8
Shmt1P50431 Igkv4-65-201ENSMUST00000196986 358 ntBASIC3.8□□□□□ -1.8
Shmt1P50431 Gm44274-201ENSMUST00000203417 256 ntBASIC3.8□□□□□ -1.8
Shmt1P50431 Gm18540-201ENSMUST00000204025 526 ntBASIC3.8□□□□□ -1.8
Shmt1P50431 Gm44941-201ENSMUST00000204216 627 ntTSL 2 BASIC3.8□□□□□ -1.8
Shmt1P50431 Gm44157-201ENSMUST00000204720 410 ntBASIC3.8□□□□□ -1.8
Shmt1P50431 Gm44208-201ENSMUST00000205199 421 ntBASIC3.8□□□□□ -1.8
Shmt1P50431 Gm18453-201ENSMUST00000208000 626 ntBASIC3.8□□□□□ -1.8
Shmt1P50431 Gm35865-201ENSMUST00000220180 287 ntTSL 3 BASIC3.8□□□□□ -1.8
Shmt1P50431 AC124772.1-201ENSMUST00000221325 151 ntBASIC3.8□□□□□ -1.8
Shmt1P50431 AC151833.1-201ENSMUST00000227752 574 ntBASIC3.8□□□□□ -1.8
Shmt1P50431 Defb14-201ENSMUST00000052601 204 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Shmt1P50431 BC100530-201ENSMUST00000096089 619 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Shmt1P50431 Gm37970-201ENSMUST00000193865 1732 ntBASIC3.8□□□□□ -1.8
Shmt1P50431 Mrgprx2-201ENSMUST00000098433 4610 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Shmt1P50431 Vmn2r90-201ENSMUST00000169805 2592 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Shmt1P50431 Olfr1111-203ENSMUST00000216378 1636 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Shmt1P50431 Vmn1r89-204ENSMUST00000227239 1992 ntAPPRIS P2 BASIC3.8□□□□□ -1.8
Shmt1P50431 Gm45304-201ENSMUST00000210303 2828 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Shmt1P50431 Gmnc-201ENSMUST00000089832 4083 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Shmt1P50431 Neb-203ENSMUST00000075301 21456 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
Shmt1P50431 F8-201ENSMUST00000033539 9784 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
Shmt1P50431 Trav8-1-201ENSMUST00000103643 328 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Shmt1P50431 Gm15526-201ENSMUST00000112504 204 ntBASIC3.79□□□□□ -1.8
Shmt1P50431 Gm14792-201ENSMUST00000119725 258 ntBASIC3.79□□□□□ -1.8
Shmt1P50431 n-R5s87-201ENSMUST00000122752 116 ntBASIC3.79□□□□□ -1.8
Shmt1P50431 Gm26041-201ENSMUST00000158148 108 ntBASIC3.79□□□□□ -1.8
Shmt1P50431 Gm23545-201ENSMUST00000158205 104 ntBASIC3.79□□□□□ -1.8
Shmt1P50431 Gm23702-201ENSMUST00000158840 130 ntBASIC3.79□□□□□ -1.8
Shmt1P50431 Gm8292-201ENSMUST00000162574 396 ntBASIC3.79□□□□□ -1.8
Shmt1P50431 Clec9a-203ENSMUST00000164513 714 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
Shmt1P50431 Gm17162-201ENSMUST00000168538 473 ntBASIC3.79□□□□□ -1.8
Shmt1P50431 Vmn2r-ps65-201ENSMUST00000173309 220 ntBASIC3.79□□□□□ -1.8
Shmt1P50431 Gm26141-201ENSMUST00000175299 126 ntBASIC3.79□□□□□ -1.8
Shmt1P50431 Gm27699-201ENSMUST00000183553 180 ntBASIC3.79□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 74.4 ms