Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Gm15844-201ENSMUST00000118016 576 ntBASIC2.33□□□□□ -2.04
Col2a1P28481 Gm14358-201ENSMUST00000118458 403 ntBASIC2.33□□□□□ -2.04
Col2a1P28481 Gm11219-201ENSMUST00000118565 358 ntBASIC2.33□□□□□ -2.04
Col2a1P28481 Gm14359-201ENSMUST00000118883 424 ntBASIC2.33□□□□□ -2.04
Col2a1P28481 Gm11410-201ENSMUST00000120053 1143 ntBASIC2.33□□□□□ -2.04
Col2a1P28481 Gm9225-201ENSMUST00000121921 836 ntBASIC2.33□□□□□ -2.04
Col2a1P28481 Gm23183-201ENSMUST00000122595 323 ntBASIC2.33□□□□□ -2.04
Col2a1P28481 Tslrn1-201ENSMUST00000129479 747 ntTSL 3 BASIC2.33□□□□□ -2.04
Col2a1P28481 Gm12150-201ENSMUST00000130874 468 ntTSL 3 BASIC2.33□□□□□ -2.04
Col2a1P28481 Gm9498-201ENSMUST00000140849 291 ntBASIC2.33□□□□□ -2.04
Col2a1P28481 1700120G11Rik-201ENSMUST00000150273 491 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
Col2a1P28481 Gm22556-201ENSMUST00000157803 100 ntBASIC2.33□□□□□ -2.04
Col2a1P28481 Gm22891-201ENSMUST00000158641 164 ntBASIC2.33□□□□□ -2.04
Col2a1P28481 Gm23022-201ENSMUST00000158768 180 ntBASIC2.33□□□□□ -2.04
Col2a1P28481 Gm8292-201ENSMUST00000162574 396 ntBASIC2.33□□□□□ -2.04
Col2a1P28481 Vmn1r-ps150-201ENSMUST00000176659 736 ntBASIC2.33□□□□□ -2.04
Col2a1P28481 Vmn1r-ps149-201ENSMUST00000176997 183 ntBASIC2.33□□□□□ -2.04
Col2a1P28481 1700022E09Rik-201ENSMUST00000185295 299 ntTSL 5 BASIC2.33□□□□□ -2.04
Col2a1P28481 Trbv22-201ENSMUST00000191697 291 ntBASIC2.33□□□□□ -2.04
Col2a1P28481 Gm43556-201ENSMUST00000196186 681 ntBASIC2.33□□□□□ -2.04
Col2a1P28481 Gm45368-201ENSMUST00000209323 703 ntTSL 5 BASIC2.33□□□□□ -2.04
Col2a1P28481 Gm45380-201ENSMUST00000210465 315 ntBASIC2.33□□□□□ -2.04
Col2a1P28481 Olfr534-ps1-201ENSMUST00000211776 870 ntBASIC2.33□□□□□ -2.04
Col2a1P28481 AC155927.1-201ENSMUST00000220114 1200 ntTSL 5 BASIC2.33□□□□□ -2.04
Col2a1P28481 AC156952.1-201ENSMUST00000220361 793 ntBASIC2.33□□□□□ -2.04
Col2a1P28481 AC155634.2-201ENSMUST00000222001 489 ntTSL 3 BASIC2.33□□□□□ -2.04
Col2a1P28481 AC124569.4-201ENSMUST00000223830 1220 ntBASIC2.33□□□□□ -2.04
Col2a1P28481 AC241593.1-201ENSMUST00000224768 397 ntBASIC2.33□□□□□ -2.04
Col2a1P28481 AC109172.1-201ENSMUST00000227503 187 ntBASIC2.33□□□□□ -2.04
Col2a1P28481 Olfr853-201ENSMUST00000058296 918 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
Col2a1P28481 Clec4a4-201ENSMUST00000079379 776 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
Col2a1P28481 Olfr987-201ENSMUST00000099929 1075 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
Col2a1P28481 Olfr146-203ENSMUST00000214410 1651 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
Col2a1P28481 Pate3-201ENSMUST00000178236 1329 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
Col2a1P28481 Ppp1r42-201ENSMUST00000027049 1425 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
Col2a1P28481 Gm22149-201ENSMUST00000104442 136 ntBASIC2.33□□□□□ -2.04
Col2a1P28481 Gm15177-201ENSMUST00000120491 577 ntBASIC2.33□□□□□ -2.04
Col2a1P28481 Gm24910-201ENSMUST00000157289 272 ntBASIC2.33□□□□□ -2.04
Col2a1P28481 Gm24076-201ENSMUST00000158179 94 ntBASIC2.33□□□□□ -2.04
Col2a1P28481 Gm24897-201ENSMUST00000179033 107 ntBASIC2.33□□□□□ -2.04
Col2a1P28481 1700063H06Rik-201ENSMUST00000183678 445 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
Col2a1P28481 Gtpbp4-ps5-201ENSMUST00000184969 289 ntBASIC2.33□□□□□ -2.04
Col2a1P28481 Gm28595-201ENSMUST00000186223 437 ntTSL 5 BASIC2.33□□□□□ -2.04
Col2a1P28481 4930554C24Rik-201ENSMUST00000187735 1084 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
Col2a1P28481 Gm37428-201ENSMUST00000193886 137 ntBASIC2.33□□□□□ -2.04
Col2a1P28481 Gm42805-201ENSMUST00000196158 276 ntBASIC2.33□□□□□ -2.04
Col2a1P28481 Gm43729-201ENSMUST00000196949 499 ntTSL 3 BASIC2.33□□□□□ -2.04
Col2a1P28481 Gm43114-201ENSMUST00000198298 343 ntBASIC2.33□□□□□ -2.04
Col2a1P28481 Gm38395-201ENSMUST00000199904 830 ntBASIC2.33□□□□□ -2.04
Col2a1P28481 4930587E11Rik-202ENSMUST00000204857 807 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
Col2a1P28481 Olfr192-202ENSMUST00000205727 1141 ntAPPRIS P1 TSL 2 BASIC2.33□□□□□ -2.04
Col2a1P28481 Olfr185-ps1-201ENSMUST00000205894 881 ntBASIC2.33□□□□□ -2.04
Col2a1P28481 AC093316.1-201ENSMUST00000218793 529 ntTSL 5 BASIC2.33□□□□□ -2.04
Col2a1P28481 CT025603.4-201ENSMUST00000225777 413 ntBASIC2.33□□□□□ -2.04
Col2a1P28481 AC161758.1-201ENSMUST00000226123 310 ntBASIC2.33□□□□□ -2.04
Col2a1P28481 AC134917.1-201ENSMUST00000220517 1449 ntBASIC2.32□□□□□ -2.04
Col2a1P28481 Gm24096-201ENSMUST00000103905 110 ntBASIC2.32□□□□□ -2.04
Col2a1P28481 Tas2r122-201ENSMUST00000105077 930 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
Col2a1P28481 Gm14669-201ENSMUST00000118841 250 ntBASIC2.32□□□□□ -2.04
Col2a1P28481 Gm14128-201ENSMUST00000119514 1011 ntBASIC2.32□□□□□ -2.04
Col2a1P28481 Gm12006-201ENSMUST00000120786 403 ntBASIC2.32□□□□□ -2.04
Col2a1P28481 Gm14707-201ENSMUST00000152793 398 ntTSL 5 BASIC2.32□□□□□ -2.04
Col2a1P28481 Obox4-ps35-201ENSMUST00000173825 680 ntTSL 3 BASIC2.32□□□□□ -2.04
Col2a1P28481 Mir3112-201ENSMUST00000175431 82 ntBASIC2.32□□□□□ -2.04
Col2a1P28481 Gm18396-201ENSMUST00000177095 361 ntBASIC2.32□□□□□ -2.04
Col2a1P28481 Snord116l12-201ENSMUST00000179816 94 ntBASIC2.32□□□□□ -2.04
Col2a1P28481 Il6st-202ENSMUST00000183513 201 ntTSL 5 BASIC2.32□□□□□ -2.04
Col2a1P28481 Gm29155-202ENSMUST00000186289 216 ntTSL 5 BASIC2.32□□□□□ -2.04
Col2a1P28481 Gm29600-201ENSMUST00000188687 377 ntBASIC2.32□□□□□ -2.04
Col2a1P28481 Gm29657-201ENSMUST00000189807 342 ntBASIC2.32□□□□□ -2.04
Col2a1P28481 Gm29184-201ENSMUST00000190038 334 ntBASIC2.32□□□□□ -2.04
Col2a1P28481 Mir7232-201ENSMUST00000197929 74 ntBASIC2.32□□□□□ -2.04
Col2a1P28481 AC162931.1-201ENSMUST00000214184 267 ntBASIC2.32□□□□□ -2.04
Col2a1P28481 AC091764.3-201ENSMUST00000219646 300 ntTSL 5 BASIC2.32□□□□□ -2.04
Col2a1P28481 AC125531.1-201ENSMUST00000219849 221 ntBASIC2.32□□□□□ -2.04
Col2a1P28481 AC156560.1-201ENSMUST00000221425 256 ntBASIC2.32□□□□□ -2.04
Col2a1P28481 AC112972.1-201ENSMUST00000227329 365 ntBASIC2.32□□□□□ -2.04
Col2a1P28481 CT030662.1-201ENSMUST00000227380 232 ntBASIC2.32□□□□□ -2.04
Col2a1P28481 S100a11-201ENSMUST00000029515 511 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
Col2a1P28481 Gm23939-201ENSMUST00000082880 133 ntBASIC2.32□□□□□ -2.04
Col2a1P28481 Gm25126-201ENSMUST00000083343 102 ntBASIC2.32□□□□□ -2.04
Col2a1P28481 Olfr1167-201ENSMUST00000099832 1100 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
Col2a1P28481 Gm8675-201ENSMUST00000201408 1856 ntBASIC2.32□□□□□ -2.04
Col2a1P28481 Olfr774-202ENSMUST00000203248 1429 ntAPPRIS P1 TSL 3 BASIC2.31□□□□□ -2.04
Col2a1P28481 Ifi203-201ENSMUST00000042228 3754 ntAPPRIS ALT2 TSL 1 (best) BASIC2.31□□□□□ -2.04
Col2a1P28481 AC152951.2-201ENSMUST00000218293 3587 ntBASIC2.31□□□□□ -2.04
Col2a1P28481 Gm14632-201ENSMUST00000101654 864 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
Col2a1P28481 Iglv3-201ENSMUST00000103751 381 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
Col2a1P28481 Gm14793-201ENSMUST00000118739 311 ntBASIC2.31□□□□□ -2.04
Col2a1P28481 Gm12721-201ENSMUST00000120621 268 ntBASIC2.31□□□□□ -2.04
Col2a1P28481 Gm23470-201ENSMUST00000157129 120 ntBASIC2.31□□□□□ -2.04
Col2a1P28481 Gm25559-201ENSMUST00000157182 74 ntBASIC2.31□□□□□ -2.04
Col2a1P28481 Gm24475-201ENSMUST00000157435 143 ntBASIC2.31□□□□□ -2.04
Col2a1P28481 Gm24060-201ENSMUST00000157494 95 ntBASIC2.31□□□□□ -2.04
Col2a1P28481 Gm22555-201ENSMUST00000157801 62 ntBASIC2.31□□□□□ -2.04
Col2a1P28481 Gm26024-201ENSMUST00000158657 322 ntBASIC2.31□□□□□ -2.04
Col2a1P28481 Gm25836-201ENSMUST00000158918 123 ntBASIC2.31□□□□□ -2.04
Col2a1P28481 Gm20526-201ENSMUST00000173416 158 ntBASIC2.31□□□□□ -2.04
Col2a1P28481 Vmn1r-ps142-201ENSMUST00000175707 852 ntBASIC2.31□□□□□ -2.04
Col2a1P28481 Gm25451-201ENSMUST00000177832 121 ntBASIC2.31□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 91.1 ms