Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Gm8300-201ENSMUST00000110152 1873 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
Cdx1P18111 Vmn1r28-202ENSMUST00000227805 10892 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
Cdx1P18111 Mup-ps14-201ENSMUST00000118437 532 ntBASIC2.04□□□□□ -2.08
Cdx1P18111 Gm15561-201ENSMUST00000124326 540 ntTSL 3 BASIC2.04□□□□□ -2.08
Cdx1P18111 Mup-ps2-201ENSMUST00000142602 533 ntBASIC2.04□□□□□ -2.08
Cdx1P18111 Gm22535-201ENSMUST00000158174 119 ntBASIC2.04□□□□□ -2.08
Cdx1P18111 Gm22611-201ENSMUST00000158288 150 ntBASIC2.04□□□□□ -2.08
Cdx1P18111 Gm24358-201ENSMUST00000158424 288 ntBASIC2.04□□□□□ -2.08
Cdx1P18111 Gm24681-201ENSMUST00000158760 107 ntBASIC2.04□□□□□ -2.08
Cdx1P18111 Gm17062-201ENSMUST00000166987 461 ntBASIC2.04□□□□□ -2.08
Cdx1P18111 Gm24816-201ENSMUST00000175311 151 ntBASIC2.04□□□□□ -2.08
Cdx1P18111 Gm23963-201ENSMUST00000179603 77 ntBASIC2.04□□□□□ -2.08
Cdx1P18111 Gm25528-201ENSMUST00000180264 132 ntBASIC2.04□□□□□ -2.08
Cdx1P18111 Gm25873-201ENSMUST00000180317 107 ntBASIC2.04□□□□□ -2.08
Cdx1P18111 Mir7242-201ENSMUST00000183710 79 ntBASIC2.04□□□□□ -2.08
Cdx1P18111 4930584F24Rik-203ENSMUST00000197091 954 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
Cdx1P18111 Gm42739-201ENSMUST00000200687 226 ntBASIC2.04□□□□□ -2.08
Cdx1P18111 Gm5485-201ENSMUST00000212197 628 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
Cdx1P18111 Gm45772-201ENSMUST00000212961 240 ntBASIC2.04□□□□□ -2.08
Cdx1P18111 Olfr1086-202ENSMUST00000213198 1153 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
Cdx1P18111 AC125532.1-201ENSMUST00000216210 2334 ntBASIC2.04□□□□□ -2.08
Cdx1P18111 Olfr711-203ENSMUST00000216335 4724 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
Cdx1P18111 AC159475.1-201ENSMUST00000216752 411 ntTSL 5 BASIC2.04□□□□□ -2.08
Cdx1P18111 Gm18242-201ENSMUST00000218455 542 ntBASIC2.04□□□□□ -2.08
Cdx1P18111 Gm2436-201ENSMUST00000219562 774 ntBASIC2.04□□□□□ -2.08
Cdx1P18111 Zfp119a-201ENSMUST00000079642 2018 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
Cdx1P18111 Gm22247-201ENSMUST00000082476 131 ntBASIC2.04□□□□□ -2.08
Cdx1P18111 Gm26437-201ENSMUST00000082595 105 ntBASIC2.04□□□□□ -2.08
Cdx1P18111 Gm10343-201ENSMUST00000096279 348 ntBASIC2.04□□□□□ -2.08
Cdx1P18111 Gm15314-201ENSMUST00000120740 1887 ntBASIC2.03□□□□□ -2.08
Cdx1P18111 Med21-203ENSMUST00000111650 572 ntTSL 2 BASIC2.03□□□□□ -2.08
Cdx1P18111 Gm15896-201ENSMUST00000118045 440 ntBASIC2.03□□□□□ -2.08
Cdx1P18111 Gm12878-201ENSMUST00000118744 332 ntBASIC2.03□□□□□ -2.08
Cdx1P18111 Gm2768-201ENSMUST00000121062 250 ntBASIC2.03□□□□□ -2.08
Cdx1P18111 Gm23642-201ENSMUST00000157858 258 ntBASIC2.03□□□□□ -2.08
Cdx1P18111 Gm22664-201ENSMUST00000158719 105 ntBASIC2.03□□□□□ -2.08
Cdx1P18111 Gm24878-201ENSMUST00000158782 104 ntBASIC2.03□□□□□ -2.08
Cdx1P18111 Gm25996-201ENSMUST00000175393 117 ntBASIC2.03□□□□□ -2.08
Cdx1P18111 Gm29429-201ENSMUST00000187071 121 ntBASIC2.03□□□□□ -2.08
Cdx1P18111 Gm37353-201ENSMUST00000194497 313 ntBASIC2.03□□□□□ -2.08
Cdx1P18111 Gm37993-201ENSMUST00000195301 988 ntBASIC2.03□□□□□ -2.08
Cdx1P18111 Gm8747-201ENSMUST00000195392 751 ntBASIC2.03□□□□□ -2.08
Cdx1P18111 AC155839.1-201ENSMUST00000200105 147 ntBASIC2.03□□□□□ -2.08
Cdx1P18111 Gm7039-201ENSMUST00000205138 346 ntBASIC2.03□□□□□ -2.08
Cdx1P18111 Gm45101-201ENSMUST00000208327 232 ntBASIC2.03□□□□□ -2.08
Cdx1P18111 Gm45387-201ENSMUST00000209792 632 ntBASIC2.03□□□□□ -2.08
Cdx1P18111 Olfr886-ps1-201ENSMUST00000212395 708 ntBASIC2.03□□□□□ -2.08
Cdx1P18111 9130015A21Rik-201ENSMUST00000221491 651 ntTSL 2 BASIC2.03□□□□□ -2.08
Cdx1P18111 Olfr1370-201ENSMUST00000058168 951 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
Cdx1P18111 Gm7984-201ENSMUST00000060640 538 ntBASIC2.03□□□□□ -2.08
Cdx1P18111 Olfr746-201ENSMUST00000080616 945 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
Cdx1P18111 Gm26458-201ENSMUST00000082832 128 ntBASIC2.03□□□□□ -2.08
Cdx1P18111 Gm23741-201ENSMUST00000097237 171 ntBASIC2.03□□□□□ -2.08
Cdx1P18111 CT025538.3-201ENSMUST00000225279 3848 ntBASIC2.03□□□□□ -2.08
Cdx1P18111 AC124561.2-201ENSMUST00000226657 1973 ntBASIC2.02□□□□□ -2.09
Cdx1P18111 Trbj1-4-201ENSMUST00000103287 51 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
Cdx1P18111 Trdj2-201ENSMUST00000103683 59 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
Cdx1P18111 Gm24340-201ENSMUST00000104208 97 ntBASIC2.02□□□□□ -2.09
Cdx1P18111 Gm25500-201ENSMUST00000104426 123 ntBASIC2.02□□□□□ -2.09
Cdx1P18111 Gm22496-201ENSMUST00000104493 88 ntBASIC2.02□□□□□ -2.09
Cdx1P18111 Rps15a-ps6-201ENSMUST00000117476 393 ntBASIC2.02□□□□□ -2.09
Cdx1P18111 Gm11845-201ENSMUST00000117886 327 ntBASIC2.02□□□□□ -2.09
Cdx1P18111 Cox20-ps-201ENSMUST00000119872 353 ntBASIC2.02□□□□□ -2.09
Cdx1P18111 Gm14770-201ENSMUST00000122197 312 ntBASIC2.02□□□□□ -2.09
Cdx1P18111 DQ267100-201ENSMUST00000122600 72 ntBASIC2.02□□□□□ -2.09
Cdx1P18111 Gm15671-201ENSMUST00000124160 576 ntTSL 5 BASIC2.02□□□□□ -2.09
Cdx1P18111 Gm22186-201ENSMUST00000157822 122 ntBASIC2.02□□□□□ -2.09
Cdx1P18111 Gm22765-201ENSMUST00000158371 128 ntBASIC2.02□□□□□ -2.09
Cdx1P18111 Gm25368-201ENSMUST00000158847 131 ntBASIC2.02□□□□□ -2.09
Cdx1P18111 Gm25707-201ENSMUST00000175120 96 ntBASIC2.02□□□□□ -2.09
Cdx1P18111 Gm25194-201ENSMUST00000177987 79 ntBASIC2.02□□□□□ -2.09
Cdx1P18111 Gm25874-201ENSMUST00000178030 79 ntBASIC2.02□□□□□ -2.09
Cdx1P18111 Gm25175-201ENSMUST00000178712 79 ntBASIC2.02□□□□□ -2.09
Cdx1P18111 Fam122c-203ENSMUST00000186314 898 ntAPPRIS P1 TSL 2 BASIC2.02□□□□□ -2.09
Cdx1P18111 Gm5329-201ENSMUST00000186898 463 ntBASIC2.02□□□□□ -2.09
Cdx1P18111 Gm29604-201ENSMUST00000187176 163 ntBASIC2.02□□□□□ -2.09
Cdx1P18111 4930553J12Rik-202ENSMUST00000187823 851 ntBASIC2.02□□□□□ -2.09
Cdx1P18111 Gm37892-201ENSMUST00000192018 437 ntTSL 3 BASIC2.02□□□□□ -2.09
Cdx1P18111 Gm37740-202ENSMUST00000194757 621 ntTSL 5 BASIC2.02□□□□□ -2.09
Cdx1P18111 2900035J10Rik-201ENSMUST00000194966 532 ntBASIC2.02□□□□□ -2.09
Cdx1P18111 Gm43708-201ENSMUST00000198857 961 ntBASIC2.02□□□□□ -2.09
Cdx1P18111 Mir7217-201ENSMUST00000200304 62 ntBASIC2.02□□□□□ -2.09
Cdx1P18111 Mir7215-201ENSMUST00000200383 51 ntBASIC2.02□□□□□ -2.09
Cdx1P18111 4930402F11Rik-202ENSMUST00000207781 1178 ntTSL 5 BASIC2.02□□□□□ -2.09
Cdx1P18111 Gm37797-201ENSMUST00000212114 815 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
Cdx1P18111 AC115735.3-201ENSMUST00000227757 513 ntBASIC2.02□□□□□ -2.09
Cdx1P18111 Olfr1105-202ENSMUST00000215978 3012 ntAPPRIS P1 TSL 3 BASIC2.02□□□□□ -2.09
Cdx1P18111 Zfp980-202ENSMUST00000180014 1938 ntAPPRIS P1 TSL 2 BASIC2.01□□□□□ -2.09
Cdx1P18111 Gm7237-201ENSMUST00000148435 1401 ntTSL 5 BASIC2.01□□□□□ -2.09
Cdx1P18111 Vmn1r185-204ENSMUST00000227411 4928 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
Cdx1P18111 Olfr630-201ENSMUST00000106880 2198 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
Cdx1P18111 Gm25466-201ENSMUST00000103995 132 ntBASIC2.01□□□□□ -2.09
Cdx1P18111 Gm11065-201ENSMUST00000111462 228 ntBASIC2.01□□□□□ -2.09
Cdx1P18111 Gm23600-201ENSMUST00000157260 71 ntBASIC2.01□□□□□ -2.09
Cdx1P18111 Gm22098-201ENSMUST00000157930 85 ntBASIC2.01□□□□□ -2.09
Cdx1P18111 Ighv1-78-201ENSMUST00000163670 294 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
Cdx1P18111 Vmn1r18-201ENSMUST00000164732 1087 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
Cdx1P18111 Defa27-201ENSMUST00000167683 282 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
Cdx1P18111 Gm26897-201ENSMUST00000180627 93 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
Cdx1P18111 Mir8090-201ENSMUST00000185078 136 ntBASIC2.01□□□□□ -2.09
Retrieved 100 of 76,532 protein–RNA pairs in 91.2 ms