Protein–RNA interactions for Protein: P13297

Msx1, Homeobox protein MSX-1, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx1P13297 Pfpl-201ENSMUST00000168148 3918 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Msx1P13297 Vmn1r71-204ENSMUST00000227702 5034 ntAPPRIS P2 BASIC4.6□□□□□ -1.67
Msx1P13297 Zfp119b-202ENSMUST00000189452 2078 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Msx1P13297 Olfr395-202ENSMUST00000215690 4275 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
Msx1P13297 Olfr2-203ENSMUST00000208147 6178 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
Msx1P13297 Traj56-201ENSMUST00000103689 63 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
Msx1P13297 Gm11742-201ENSMUST00000119903 233 ntBASIC4.6□□□□□ -1.67
Msx1P13297 Gm24916-201ENSMUST00000157287 79 ntBASIC4.6□□□□□ -1.67
Msx1P13297 Gm17159-201ENSMUST00000169043 482 ntBASIC4.6□□□□□ -1.67
Msx1P13297 Gm27564-201ENSMUST00000185196 96 ntBASIC4.6□□□□□ -1.67
Msx1P13297 Gm38238-201ENSMUST00000194334 346 ntBASIC4.6□□□□□ -1.67
Msx1P13297 Smcp-202ENSMUST00000194965 744 ntAPPRIS P1 TSL 3 BASIC4.6□□□□□ -1.67
Msx1P13297 Gm38088-201ENSMUST00000195829 241 ntBASIC4.6□□□□□ -1.67
Msx1P13297 Gm44349-201ENSMUST00000197048 123 ntBASIC4.6□□□□□ -1.67
Msx1P13297 Gm43441-201ENSMUST00000201458 205 ntBASIC4.6□□□□□ -1.67
Msx1P13297 Gm45543-201ENSMUST00000209327 88 ntBASIC4.6□□□□□ -1.67
Msx1P13297 Gm45651-201ENSMUST00000210857 335 ntBASIC4.6□□□□□ -1.67
Msx1P13297 Gm45492-201ENSMUST00000211611 288 ntBASIC4.6□□□□□ -1.67
Msx1P13297 4930567H12Rik-204ENSMUST00000213085 801 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Msx1P13297 Gm25136-201ENSMUST00000083253 115 ntBASIC4.6□□□□□ -1.67
Msx1P13297 Gm597-201ENSMUST00000059937 2887 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Msx1P13297 Ptprd-217ENSMUST00000174023 4530 ntTSL 5 BASIC4.6□□□□□ -1.67
Msx1P13297 Ptprd-203ENSMUST00000098005 4542 ntTSL 5 BASIC4.6□□□□□ -1.67
Msx1P13297 Akr1c14-202ENSMUST00000118717 3183 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
Msx1P13297 Gm44439-201ENSMUST00000203379 3592 ntBASIC4.6□□□□□ -1.67
Msx1P13297 AC135119.1-201ENSMUST00000227935 3717 ntBASIC4.6□□□□□ -1.67
Msx1P13297 Rbm44-201ENSMUST00000094698 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Msx1P13297 Cnot1-201ENSMUST00000068452 8152 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Msx1P13297 9430025C20Rik-201ENSMUST00000068663 2115 ntBASIC4.6□□□□□ -1.67
Msx1P13297 Mdn1-201ENSMUST00000071642 17970 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
Msx1P13297 Lcorl-204ENSMUST00000087164 4979 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Msx1P13297 Ccr2-202ENSMUST00000165984 3515 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
Msx1P13297 Mir680-3-201ENSMUST00000102298 87 ntBASIC4.59□□□□□ -1.67
Msx1P13297 Traj50-201ENSMUST00000103693 63 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
Msx1P13297 Btbd35f18-201ENSMUST00000105019 1960 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
Msx1P13297 Gm23492-201ENSMUST00000116837 115 ntBASIC4.59□□□□□ -1.67
Msx1P13297 Gm11196-201ENSMUST00000119052 395 ntBASIC4.59□□□□□ -1.67
Msx1P13297 Gm14688-201ENSMUST00000119169 303 ntBASIC4.59□□□□□ -1.67
Msx1P13297 Cox20-ps-201ENSMUST00000119872 353 ntBASIC4.59□□□□□ -1.67
Msx1P13297 Gm13801-201ENSMUST00000120750 160 ntBASIC4.59□□□□□ -1.67
Msx1P13297 Gm22343-201ENSMUST00000122648 286 ntBASIC4.59□□□□□ -1.67
Msx1P13297 Gm24010-201ENSMUST00000157731 282 ntBASIC4.59□□□□□ -1.67
Msx1P13297 Gm25224-201ENSMUST00000158195 68 ntBASIC4.59□□□□□ -1.67
Msx1P13297 Gm24053-201ENSMUST00000158620 105 ntBASIC4.59□□□□□ -1.67
Msx1P13297 Usf3-204ENSMUST00000169582 12604 ntAPPRIS P2 TSL 5 BASIC4.59□□□□□ -1.67
Msx1P13297 Mir6416-201ENSMUST00000183664 117 ntBASIC4.59□□□□□ -1.67
Msx1P13297 Mir6383-201ENSMUST00000184545 116 ntBASIC4.59□□□□□ -1.67
Msx1P13297 Gm2396-202ENSMUST00000188232 3433 ntTSL 5 BASIC4.59□□□□□ -1.67
Msx1P13297 Gm37587-202ENSMUST00000194935 475 ntTSL 3 BASIC4.59□□□□□ -1.67
Msx1P13297 Gm43185-201ENSMUST00000197507 2775 ntBASIC4.59□□□□□ -1.67
Msx1P13297 Gm43199-201ENSMUST00000200019 307 ntBASIC4.59□□□□□ -1.67
Msx1P13297 Gm30146-201ENSMUST00000206564 605 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Msx1P13297 Olfr578-202ENSMUST00000215606 3665 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
Msx1P13297 Gm3333-201ENSMUST00000221637 452 ntTSL 5 BASIC4.59□□□□□ -1.67
Msx1P13297 AC165106.2-201ENSMUST00000226749 97 ntBASIC4.59□□□□□ -1.67
Msx1P13297 Casp12-201ENSMUST00000027009 2649 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Msx1P13297 Gm10172-201ENSMUST00000085929 558 ntBASIC4.59□□□□□ -1.67
Msx1P13297 4931408C20Rik-201ENSMUST00000097801 4318 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Msx1P13297 Igsf10-201ENSMUST00000039419 10084 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.68
Msx1P13297 Vmn1r184-202ENSMUST00000227230 7999 ntAPPRIS P1 BASIC4.59□□□□□ -1.68
Msx1P13297 Gm31747-201ENSMUST00000204638 3086 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
Msx1P13297 Vmn2r-ps56-201ENSMUST00000174814 2596 ntBASIC4.59□□□□□ -1.68
Msx1P13297 Zfp989-202ENSMUST00000146688 2295 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Msx1P13297 Zfhx4-205ENSMUST00000176383 13500 ntAPPRIS P2 TSL 5 BASIC4.58□□□□□ -1.68
Msx1P13297 Olfr1406-202ENSMUST00000201132 2952 ntAPPRIS P1 TSL 3 BASIC4.58□□□□□ -1.68
Msx1P13297 AC139218.1-201ENSMUST00000228215 4287 ntBASIC4.58□□□□□ -1.68
Msx1P13297 Gm6639-202ENSMUST00000196841 2666 ntTSL 5 BASIC4.58□□□□□ -1.68
Msx1P13297 Gm2869-201ENSMUST00000124359 2621 ntBASIC4.58□□□□□ -1.68
Msx1P13297 Vmn2r74-201ENSMUST00000166355 2562 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Msx1P13297 Gm25419-201ENSMUST00000104215 191 ntBASIC4.58□□□□□ -1.68
Msx1P13297 Gm11631-201ENSMUST00000119220 156 ntBASIC4.58□□□□□ -1.68
Msx1P13297 Gm14619-201ENSMUST00000120480 168 ntBASIC4.58□□□□□ -1.68
Msx1P13297 Gm15022-201ENSMUST00000122074 746 ntBASIC4.58□□□□□ -1.68
Msx1P13297 Junos-205ENSMUST00000130684 614 ntTSL 3 BASIC4.58□□□□□ -1.68
Msx1P13297 Gm23713-201ENSMUST00000157353 70 ntBASIC4.58□□□□□ -1.68
Msx1P13297 Gm22615-201ENSMUST00000158102 70 ntBASIC4.58□□□□□ -1.68
Msx1P13297 Gm22177-201ENSMUST00000175002 158 ntBASIC4.58□□□□□ -1.68
Msx1P13297 Gm24949-201ENSMUST00000183609 215 ntBASIC4.58□□□□□ -1.68
Msx1P13297 Gm37836-201ENSMUST00000195875 175 ntBASIC4.58□□□□□ -1.68
Msx1P13297 4930520M14Rik-201ENSMUST00000196947 701 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Msx1P13297 Gm17887-201ENSMUST00000200194 547 ntBASIC4.58□□□□□ -1.68
Msx1P13297 Snhg1-205ENSMUST00000205825 495 ntTSL 3 BASIC4.58□□□□□ -1.68
Msx1P13297 Vmn1r20-202ENSMUST00000227909 3709 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Msx1P13297 Olfr699-202ENSMUST00000215952 3669 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Msx1P13297 Trpc5os-201ENSMUST00000155206 3585 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Msx1P13297 Gm38020-201ENSMUST00000193066 4676 ntBASIC4.58□□□□□ -1.68
Msx1P13297 Polk-205ENSMUST00000221899 2319 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
Msx1P13297 Gm45129-201ENSMUST00000208444 2224 ntBASIC4.58□□□□□ -1.68
Msx1P13297 Olfr695-201ENSMUST00000216868 3953 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Msx1P13297 Kcnb2-201ENSMUST00000170146 14845 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Msx1P13297 Ptgs2os-202ENSMUST00000181915 2937 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Msx1P13297 Vmn1r171-207ENSMUST00000227774 2867 ntAPPRIS ALT2 BASIC4.58□□□□□ -1.68
Msx1P13297 Fat1-206ENSMUST00000215588 13938 ntTSL 5 BASIC4.58□□□□□ -1.68
Msx1P13297 Olfr1404-203ENSMUST00000217374 3686 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Msx1P13297 Huwe1-202ENSMUST00000112622 14168 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
Msx1P13297 Vmn1r171-206ENSMUST00000227386 2570 ntAPPRIS ALT2 BASIC4.58□□□□□ -1.68
Msx1P13297 Vmn1r171-208ENSMUST00000227866 2566 ntAPPRIS ALT2 BASIC4.58□□□□□ -1.68
Msx1P13297 Pof1b-201ENSMUST00000039887 3886 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Msx1P13297 Gm11264-201ENSMUST00000143755 2969 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Msx1P13297 Vmn1r90-207ENSMUST00000227692 7101 ntAPPRIS P2 BASIC4.57□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 82.2 ms