Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Sult2a6-202ENSMUST00000184731 664 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
Col1a1P11087 Gm37449-201ENSMUST00000193016 270 ntBASIC1.46□□□□□ -2.18
Col1a1P11087 Gm18658-201ENSMUST00000195558 270 ntBASIC1.46□□□□□ -2.18
Col1a1P11087 AC117198.1-201ENSMUST00000217080 651 ntTSL 5 BASIC1.46□□□□□ -2.18
Col1a1P11087 AC167977.1-201ENSMUST00000221384 234 ntBASIC1.46□□□□□ -2.18
Col1a1P11087 Traj40-201ENSMUST00000103702 61 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
Col1a1P11087 Gm14322-201ENSMUST00000108942 1074 ntTSL 2 BASIC1.45□□□□□ -2.18
Col1a1P11087 Gm23991-201ENSMUST00000117033 93 ntBASIC1.45□□□□□ -2.18
Col1a1P11087 Gm15037-201ENSMUST00000120358 259 ntBASIC1.45□□□□□ -2.18
Col1a1P11087 Gm14709-201ENSMUST00000121225 304 ntBASIC1.45□□□□□ -2.18
Col1a1P11087 Gm25715-201ENSMUST00000158627 125 ntBASIC1.45□□□□□ -2.18
Col1a1P11087 Nron-204ENSMUST00000158971 370 ntBASIC1.45□□□□□ -2.18
Col1a1P11087 Gm16289-201ENSMUST00000162079 183 ntBASIC1.45□□□□□ -2.18
Col1a1P11087 Trbv12-3-201ENSMUST00000192675 372 ntBASIC1.45□□□□□ -2.18
Col1a1P11087 Gm35558-202ENSMUST00000221819 499 ntBASIC1.45□□□□□ -2.18
Col1a1P11087 AC154562.1-201ENSMUST00000226140 966 ntBASIC1.45□□□□□ -2.18
Col1a1P11087 AC133156.1-202ENSMUST00000227284 363 ntBASIC1.45□□□□□ -2.18
Col1a1P11087 Olfr1161-201ENSMUST00000054845 1012 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
Col1a1P11087 2610044O15Rik8-201ENSMUST00000079272 264 ntTSL 5 BASIC1.45□□□□□ -2.18
Col1a1P11087 Olfr1475-201ENSMUST00000080801 945 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
Col1a1P11087 Gm25080-201ENSMUST00000082526 107 ntBASIC1.45□□□□□ -2.18
Col1a1P11087 Gm14327-201ENSMUST00000099001 192 ntTSL 5 BASIC1.45□□□□□ -2.18
Col1a1P11087 Gm42701-201ENSMUST00000196117 1657 ntBASIC1.45□□□□□ -2.18
Col1a1P11087 Gm13082-201ENSMUST00000118877 561 ntBASIC1.44□□□□□ -2.18
Col1a1P11087 Gm14366-201ENSMUST00000121970 730 ntBASIC1.44□□□□□ -2.18
Col1a1P11087 Gm22136-201ENSMUST00000158751 268 ntBASIC1.44□□□□□ -2.18
Col1a1P11087 Gm37557-201ENSMUST00000191640 139 ntBASIC1.44□□□□□ -2.18
Col1a1P11087 Gm19066-201ENSMUST00000193232 1078 ntBASIC1.44□□□□□ -2.18
Col1a1P11087 Gm6639-204ENSMUST00000199182 800 ntTSL 5 BASIC1.44□□□□□ -2.18
Col1a1P11087 Gm44962-201ENSMUST00000206460 279 ntBASIC1.44□□□□□ -2.18
Col1a1P11087 AC133083.2-201ENSMUST00000222826 272 ntTSL 5 BASIC1.44□□□□□ -2.18
Col1a1P11087 Ly96-201ENSMUST00000026881 632 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
Col1a1P11087 BC117090-201ENSMUST00000114850 387 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
Col1a1P11087 Gm11248-201ENSMUST00000119568 201 ntBASIC1.43□□□□□ -2.18
Col1a1P11087 Gm1989-201ENSMUST00000126244 636 ntBASIC1.43□□□□□ -2.18
Col1a1P11087 Gm26186-201ENSMUST00000157689 125 ntBASIC1.43□□□□□ -2.18
Col1a1P11087 Tcrg-C3-201ENSMUST00000164407 519 ntAPPRIS ALT2 TSL 1 (best) BASIC1.43□□□□□ -2.18
Col1a1P11087 Vmn1r-ps83-201ENSMUST00000172677 705 ntBASIC1.43□□□□□ -2.18
Col1a1P11087 Gm5224-201ENSMUST00000183060 350 ntBASIC1.43□□□□□ -2.18
Col1a1P11087 Mir6541-201ENSMUST00000183649 110 ntBASIC1.43□□□□□ -2.18
Col1a1P11087 Gm44462-201ENSMUST00000199696 129 ntBASIC1.43□□□□□ -2.18
Col1a1P11087 Igkv20-101-2-201ENSMUST00000200406 339 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
Col1a1P11087 Gm44818-201ENSMUST00000206608 358 ntBASIC1.43□□□□□ -2.18
Col1a1P11087 Gm44666-201ENSMUST00000208544 391 ntBASIC1.43□□□□□ -2.18
Col1a1P11087 Gm45741-201ENSMUST00000212661 152 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
Col1a1P11087 AC124524.1-201ENSMUST00000225833 181 ntBASIC1.43□□□□□ -2.18
Col1a1P11087 4933400A11Rik-202ENSMUST00000068894 1217 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
Col1a1P11087 Olfr868-201ENSMUST00000212767 4196 ntAPPRIS P1 TSL 3 BASIC1.43□□□□□ -2.18
Col1a1P11087 Gm14406-202ENSMUST00000108945 1348 ntAPPRIS P1 TSL 3 BASIC1.43□□□□□ -2.18
Col1a1P11087 Gm21814-203ENSMUST00000203729 1352 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
Col1a1P11087 Gm25097-201ENSMUST00000104042 145 ntBASIC1.43□□□□□ -2.18
Col1a1P11087 Vmn1r-ps26-201ENSMUST00000174239 840 ntBASIC1.43□□□□□ -2.18
Col1a1P11087 Npn2-202ENSMUST00000189275 235 ntBASIC1.43□□□□□ -2.18
Col1a1P11087 Gm42439-201ENSMUST00000195931 486 ntTSL 3 BASIC1.43□□□□□ -2.18
Col1a1P11087 Gm45288-201ENSMUST00000210236 151 ntBASIC1.43□□□□□ -2.18
Col1a1P11087 Prl2c5-201ENSMUST00000021778 844 ntAPPRIS P3 TSL 1 (best) BASIC1.43□□□□□ -2.18
Col1a1P11087 AC158395.1-201ENSMUST00000227206 452 ntBASIC1.43□□□□□ -2.18
Col1a1P11087 AC121114.1-201ENSMUST00000228522 570 ntBASIC1.43□□□□□ -2.18
Col1a1P11087 Olfr807-201ENSMUST00000059038 997 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
Col1a1P11087 AC153964.2-201ENSMUST00000217704 2474 ntBASIC1.42□□□□□ -2.18
Col1a1P11087 Cpa3-201ENSMUST00000001921 1449 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
Col1a1P11087 Olfr138-202ENSMUST00000172843 1769 ntAPPRIS P1 TSL 2 BASIC1.42□□□□□ -2.18
Col1a1P11087 Gm22390-201ENSMUST00000157588 325 ntBASIC1.42□□□□□ -2.18
Col1a1P11087 Mir6402-201ENSMUST00000183406 80 ntBASIC1.42□□□□□ -2.18
Col1a1P11087 Gm42891-201ENSMUST00000199340 281 ntTSL 5 BASIC1.42□□□□□ -2.18
Col1a1P11087 Gm7065-201ENSMUST00000222150 474 ntBASIC1.42□□□□□ -2.18
Col1a1P11087 Zc3h14-201ENSMUST00000021399 1430 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
Col1a1P11087 Tex15-201ENSMUST00000009772 8405 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
Col1a1P11087 Gm25560-201ENSMUST00000104606 176 ntBASIC1.41□□□□□ -2.18
Col1a1P11087 Gm13541-201ENSMUST00000119519 283 ntBASIC1.41□□□□□ -2.18
Col1a1P11087 Gm24348-201ENSMUST00000158710 130 ntBASIC1.41□□□□□ -2.18
Col1a1P11087 Gm23415-201ENSMUST00000175519 83 ntBASIC1.41□□□□□ -2.18
Col1a1P11087 Gm26741-201ENSMUST00000180473 87 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
Col1a1P11087 Gm28986-201ENSMUST00000189682 678 ntTSL 5 BASIC1.41□□□□□ -2.18
Col1a1P11087 Gm38353-201ENSMUST00000192351 617 ntTSL 3 BASIC1.41□□□□□ -2.18
Col1a1P11087 Gm37987-201ENSMUST00000194999 825 ntBASIC1.41□□□□□ -2.18
Col1a1P11087 Gm29815-201ENSMUST00000202418 178 ntBASIC1.41□□□□□ -2.18
Col1a1P11087 C030038I04Rik-201ENSMUST00000207840 740 ntBASIC1.41□□□□□ -2.18
Col1a1P11087 Olfr1315-ps1-202ENSMUST00000208654 945 ntAPPRIS ALT1 BASIC1.41□□□□□ -2.18
Col1a1P11087 AC160962.2-201ENSMUST00000224761 632 ntBASIC1.41□□□□□ -2.18
Col1a1P11087 Olfr786-201ENSMUST00000076508 939 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
Col1a1P11087 Olfr1316-201ENSMUST00000099596 945 ntAPPRIS P2 BASIC1.41□□□□□ -2.18
Col1a1P11087 Gm42524-201ENSMUST00000202881 2214 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
Col1a1P11087 Gm15382-201ENSMUST00000118011 537 ntBASIC1.4□□□□□ -2.19
Col1a1P11087 Xlr4e-ps-201ENSMUST00000122102 648 ntBASIC1.4□□□□□ -2.19
Col1a1P11087 Gm23893-201ENSMUST00000158106 134 ntBASIC1.4□□□□□ -2.19
Col1a1P11087 Gm25432-201ENSMUST00000158284 66 ntBASIC1.4□□□□□ -2.19
Col1a1P11087 Rpl30-ps2-201ENSMUST00000160070 291 ntBASIC1.4□□□□□ -2.19
Col1a1P11087 Gm21809-201ENSMUST00000178495 468 ntBASIC1.4□□□□□ -2.19
Col1a1P11087 1700029B22Rik-202ENSMUST00000186532 694 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
Col1a1P11087 Gm43096-201ENSMUST00000196173 421 ntBASIC1.4□□□□□ -2.19
Col1a1P11087 1700016B01Rik-201ENSMUST00000197688 270 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
Col1a1P11087 Gm6590-201ENSMUST00000203343 687 ntBASIC1.4□□□□□ -2.19
Col1a1P11087 AU041133-201ENSMUST00000105314 1494 ntTSL 5 BASIC1.4□□□□□ -2.19
Col1a1P11087 Gm25506-201ENSMUST00000104339 70 ntBASIC1.39□□□□□ -2.19
Col1a1P11087 Gm17790-201ENSMUST00000191545 1228 ntBASIC1.39□□□□□ -2.19
Col1a1P11087 4930449A18Rik-202ENSMUST00000192453 1200 ntBASIC1.39□□□□□ -2.19
Col1a1P11087 Gm43659-201ENSMUST00000200894 628 ntBASIC1.39□□□□□ -2.19
Col1a1P11087 Gm45791-201ENSMUST00000212908 352 ntBASIC1.39□□□□□ -2.19
Col1a1P11087 AC125488.1-201ENSMUST00000219586 212 ntBASIC1.39□□□□□ -2.19
Retrieved 100 of 76,532 protein–RNA pairs in 90 ms