Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Gm24163-201ENSMUST00000093660 132 ntBASIC3.82□□□□□ -1.8
Hoxd3P09027 Clec5a-202ENSMUST00000101491 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
Hoxd3P09027 Gm37478-201ENSMUST00000193624 3495 ntBASIC3.82□□□□□ -1.8
Hoxd3P09027 6720464F23Rik-201ENSMUST00000193946 3496 ntBASIC3.82□□□□□ -1.8
Hoxd3P09027 Zfp493-201ENSMUST00000164936 3258 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
Hoxd3P09027 Zfp143-201ENSMUST00000084727 3003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.82□□□□□ -1.8
Hoxd3P09027 Olfr1406-202ENSMUST00000201132 2952 ntAPPRIS P1 TSL 3 BASIC3.82□□□□□ -1.8
Hoxd3P09027 Olfr123-203ENSMUST00000216051 2716 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Hoxd3P09027 Gm6205-202ENSMUST00000190001 2515 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Hoxd3P09027 C2cd6-201ENSMUST00000097080 2131 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
Hoxd3P09027 Spata31d1c-201ENSMUST00000099427 3390 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
Hoxd3P09027 Gm16185-201ENSMUST00000125071 3207 ntTSL 5 BASIC3.82□□□□□ -1.8
Hoxd3P09027 Dnah7c-204ENSMUST00000189749 12207 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Hoxd3P09027 Kcnt2-202ENSMUST00000120709 5790 ntTSL 5 BASIC3.81□□□□□ -1.8
Hoxd3P09027 Gm43130-201ENSMUST00000197721 3907 ntBASIC3.81□□□□□ -1.8
Hoxd3P09027 Rnf213-202ENSMUST00000131035 16716 ntAPPRIS P5 TSL 5 BASIC3.81□□□□□ -1.8
Hoxd3P09027 Scgb1b23-ps-201ENSMUST00000116009 252 ntBASIC3.81□□□□□ -1.8
Hoxd3P09027 Gm14215-201ENSMUST00000120578 221 ntBASIC3.81□□□□□ -1.8
Hoxd3P09027 Olfr1191-ps1-201ENSMUST00000120598 4677 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Hoxd3P09027 Gm15022-201ENSMUST00000122074 746 ntBASIC3.81□□□□□ -1.8
Hoxd3P09027 Gm26404-201ENSMUST00000158498 109 ntBASIC3.81□□□□□ -1.8
Hoxd3P09027 Gm23337-201ENSMUST00000158959 118 ntBASIC3.81□□□□□ -1.8
Hoxd3P09027 1700058P15Rik-201ENSMUST00000159981 413 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Hoxd3P09027 Gm25069-201ENSMUST00000175238 86 ntBASIC3.81□□□□□ -1.8
Hoxd3P09027 Gm9687-201ENSMUST00000189312 602 ntBASIC3.81□□□□□ -1.8
Hoxd3P09027 C4bp-ps1-201ENSMUST00000189393 706 ntBASIC3.81□□□□□ -1.8
Hoxd3P09027 Gm38298-201ENSMUST00000193578 118 ntBASIC3.81□□□□□ -1.8
Hoxd3P09027 9530022L04Rik-201ENSMUST00000194340 310 ntBASIC3.81□□□□□ -1.8
Hoxd3P09027 Gm8874-201ENSMUST00000196826 286 ntBASIC3.81□□□□□ -1.8
Hoxd3P09027 Snhg1-205ENSMUST00000205825 495 ntTSL 3 BASIC3.81□□□□□ -1.8
Hoxd3P09027 Gm35405-201ENSMUST00000218754 400 ntBASIC3.81□□□□□ -1.8
Hoxd3P09027 9430025C20Rik-201ENSMUST00000068663 2115 ntBASIC3.81□□□□□ -1.8
Hoxd3P09027 Gm22220-201ENSMUST00000082671 149 ntBASIC3.81□□□□□ -1.8
Hoxd3P09027 Gm23462-201ENSMUST00000083264 104 ntBASIC3.81□□□□□ -1.8
Hoxd3P09027 Gm22681-201ENSMUST00000083853 106 ntBASIC3.81□□□□□ -1.8
Hoxd3P09027 Zfp119b-202ENSMUST00000189452 2078 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Hoxd3P09027 Gm31371-201ENSMUST00000211848 2088 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Hoxd3P09027 Gm11228-201ENSMUST00000143796 2013 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Hoxd3P09027 Olfr1192-ps1-201ENSMUST00000120518 2738 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Hoxd3P09027 Nlrp5-203ENSMUST00000108441 3375 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
Hoxd3P09027 4933423P22Rik-201ENSMUST00000126219 4595 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Hoxd3P09027 Slco1a4-203ENSMUST00000165990 3823 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Hoxd3P09027 A630033H20Rik-205ENSMUST00000167673 3044 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
Hoxd3P09027 AC139218.1-201ENSMUST00000228215 4287 ntBASIC3.81□□□□□ -1.8
Hoxd3P09027 Olfr1034-201ENSMUST00000213496 4882 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Hoxd3P09027 A530099J19Rik-201ENSMUST00000151029 2764 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Hoxd3P09027 Olfr410-203ENSMUST00000214490 5075 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Hoxd3P09027 Pak3-204ENSMUST00000112865 8484 ntAPPRIS P3 TSL 5 BASIC3.8□□□□□ -1.8
Hoxd3P09027 Vmn2r110-201ENSMUST00000169559 2577 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Hoxd3P09027 Olfr1317-203ENSMUST00000214801 2578 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Hoxd3P09027 Dnah3-201ENSMUST00000046993 12252 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
Hoxd3P09027 Hdx-202ENSMUST00000113422 9534 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Hoxd3P09027 Olfr1286-202ENSMUST00000184954 3398 ntAPPRIS P1 TSL 3 BASIC3.8□□□□□ -1.8
Hoxd3P09027 Gm23013-201ENSMUST00000104146 106 ntBASIC3.8□□□□□ -1.8
Hoxd3P09027 Gm13756-201ENSMUST00000117618 222 ntBASIC3.8□□□□□ -1.8
Hoxd3P09027 Gm12143-201ENSMUST00000119666 332 ntBASIC3.8□□□□□ -1.8
Hoxd3P09027 Gm12086-201ENSMUST00000120863 228 ntBASIC3.8□□□□□ -1.8
Hoxd3P09027 Gm22343-201ENSMUST00000122648 286 ntBASIC3.8□□□□□ -1.8
Hoxd3P09027 Gm22316-201ENSMUST00000158012 216 ntBASIC3.8□□□□□ -1.8
Hoxd3P09027 Gm24053-201ENSMUST00000158620 105 ntBASIC3.8□□□□□ -1.8
Hoxd3P09027 Mirlet7e-201ENSMUST00000196737 93 ntBASIC3.8□□□□□ -1.8
Hoxd3P09027 Fxyd1-210ENSMUST00000206012 501 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Hoxd3P09027 AC154527.5-201ENSMUST00000224448 496 ntBASIC3.8□□□□□ -1.8
Hoxd3P09027 CT009711.3-201ENSMUST00000225882 250 ntBASIC3.8□□□□□ -1.8
Hoxd3P09027 Gm24166-201ENSMUST00000082724 135 ntBASIC3.8□□□□□ -1.8
Hoxd3P09027 Mir488-201ENSMUST00000093595 109 ntBASIC3.8□□□□□ -1.8
Hoxd3P09027 Zscan4a-201ENSMUST00000210573 2279 ntBASIC3.8□□□□□ -1.8
Hoxd3P09027 Slc15a2-201ENSMUST00000023616 3993 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
Hoxd3P09027 Senp7-202ENSMUST00000089360 4802 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
Hoxd3P09027 Gm15581-201ENSMUST00000131334 5640 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Hoxd3P09027 Gm4567-202ENSMUST00000190554 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Hoxd3P09027 Gm10668-202ENSMUST00000191073 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Hoxd3P09027 Gm6902-202ENSMUST00000191169 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Hoxd3P09027 Gm6176-202ENSMUST00000207633 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Hoxd3P09027 Vmn1r71-202ENSMUST00000226874 5194 ntAPPRIS P2 BASIC3.8□□□□□ -1.8
Hoxd3P09027 Gm43259-201ENSMUST00000198446 3277 ntBASIC3.8□□□□□ -1.8
Hoxd3P09027 Rnf2-204ENSMUST00000187048 3201 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Hoxd3P09027 Olfr1312-203ENSMUST00000213961 5345 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Hoxd3P09027 Gm5248-201ENSMUST00000186108 4046 ntBASIC3.79□□□□□ -1.8
Hoxd3P09027 Postn-204ENSMUST00000117373 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
Hoxd3P09027 Vmn1r14-204ENSMUST00000227768 7005 ntAPPRIS P2 BASIC3.79□□□□□ -1.8
Hoxd3P09027 Abcg2-201ENSMUST00000031822 5717 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Hoxd3P09027 Vmn1r215-202ENSMUST00000228092 2790 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Hoxd3P09027 Gm20139-202ENSMUST00000216041 3888 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Hoxd3P09027 Trav6n-6-201ENSMUST00000103613 287 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Hoxd3P09027 Rps19-ps7-201ENSMUST00000116122 438 ntBASIC3.79□□□□□ -1.8
Hoxd3P09027 Gm15714-201ENSMUST00000117168 250 ntBASIC3.79□□□□□ -1.8
Hoxd3P09027 Gm12039-201ENSMUST00000118219 180 ntBASIC3.79□□□□□ -1.8
Hoxd3P09027 Gm12954-201ENSMUST00000118610 611 ntBASIC3.79□□□□□ -1.8
Hoxd3P09027 Gm14500-201ENSMUST00000121647 113 ntBASIC3.79□□□□□ -1.8
Hoxd3P09027 Gm25269-201ENSMUST00000122601 104 ntBASIC3.79□□□□□ -1.8
Hoxd3P09027 Gm15537-201ENSMUST00000126677 485 ntTSL 2 BASIC3.79□□□□□ -1.8
Hoxd3P09027 Gm24717-201ENSMUST00000157522 124 ntBASIC3.79□□□□□ -1.8
Hoxd3P09027 Gm24188-201ENSMUST00000157980 108 ntBASIC3.79□□□□□ -1.8
Hoxd3P09027 Gm24217-201ENSMUST00000158260 133 ntBASIC3.79□□□□□ -1.8
Hoxd3P09027 Gm28500-201ENSMUST00000190286 151 ntBASIC3.79□□□□□ -1.8
Hoxd3P09027 Gm38163-201ENSMUST00000194112 482 ntTSL 5 BASIC3.79□□□□□ -1.8
Hoxd3P09027 Rpl18a-ps2-201ENSMUST00000197158 174 ntBASIC3.79□□□□□ -1.8
Hoxd3P09027 Gm30146-201ENSMUST00000206564 605 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Hoxd3P09027 Gm45116-201ENSMUST00000207392 275 ntBASIC3.79□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 108.8 ms