Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 AC241593.1-201ENSMUST00000224768 397 ntBASIC1.82□□□□□ -2.12
Col5a1O88207 Olfr916-201ENSMUST00000081196 933 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
Col5a1O88207 Gm24661-201ENSMUST00000083205 104 ntBASIC1.82□□□□□ -2.12
Col5a1O88207 1110057P08Rik-201ENSMUST00000089097 465 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
Col5a1O88207 Olfr1487-203ENSMUST00000209005 2061 ntTSL 3 BASIC1.82□□□□□ -2.12
Col5a1O88207 Gm2869-201ENSMUST00000124359 2621 ntBASIC1.82□□□□□ -2.12
Col5a1O88207 AC164297.6-201ENSMUST00000224643 1568 ntBASIC1.82□□□□□ -2.12
Col5a1O88207 Pate3-201ENSMUST00000178236 1329 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
Col5a1O88207 Zfp788-207ENSMUST00000170770 2499 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
Col5a1O88207 Gm20557-201ENSMUST00000192871 2794 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
Col5a1O88207 Gm26002-201ENSMUST00000101915 107 ntBASIC1.81□□□□□ -2.12
Col5a1O88207 Gm12803-201ENSMUST00000118907 821 ntBASIC1.81□□□□□ -2.12
Col5a1O88207 Gm12721-201ENSMUST00000120621 268 ntBASIC1.81□□□□□ -2.12
Col5a1O88207 Gm11583-201ENSMUST00000132296 466 ntTSL 5 BASIC1.81□□□□□ -2.12
Col5a1O88207 Gm27192-201ENSMUST00000136428 581 ntTSL 3 BASIC1.81□□□□□ -2.12
Col5a1O88207 Gm22036-201ENSMUST00000157279 215 ntBASIC1.81□□□□□ -2.12
Col5a1O88207 Gm8161-201ENSMUST00000168739 481 ntBASIC1.81□□□□□ -2.12
Col5a1O88207 Gm18417-201ENSMUST00000176564 648 ntBASIC1.81□□□□□ -2.12
Col5a1O88207 Obox4-ps6-201ENSMUST00000176578 724 ntBASIC1.81□□□□□ -2.12
Col5a1O88207 Vmn1r-ps8-201ENSMUST00000177200 838 ntBASIC1.81□□□□□ -2.12
Col5a1O88207 Gm22776-201ENSMUST00000178634 94 ntBASIC1.81□□□□□ -2.12
Col5a1O88207 Gm23767-201ENSMUST00000179278 94 ntBASIC1.81□□□□□ -2.12
Col5a1O88207 Mir7j-201ENSMUST00000184427 122 ntBASIC1.81□□□□□ -2.12
Col5a1O88207 Gm43070-201ENSMUST00000196938 415 ntBASIC1.81□□□□□ -2.12
Col5a1O88207 Gm43550-201ENSMUST00000200597 303 ntBASIC1.81□□□□□ -2.12
Col5a1O88207 Gm44634-201ENSMUST00000206119 152 ntBASIC1.81□□□□□ -2.12
Col5a1O88207 CT030187.1-201ENSMUST00000220605 252 ntBASIC1.81□□□□□ -2.12
Col5a1O88207 AC129208.2-201ENSMUST00000228506 320 ntBASIC1.81□□□□□ -2.12
Col5a1O88207 Olfr1123-201ENSMUST00000054974 972 ntAPPRIS P2 BASIC1.81□□□□□ -2.12
Col5a1O88207 Snora69-201ENSMUST00000083708 131 ntBASIC1.81□□□□□ -2.12
Col5a1O88207 Olfr1453-201ENSMUST00000087773 924 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
Col5a1O88207 Gm10267-201ENSMUST00000091916 258 ntAPPRIS ALT2 TSL 5 BASIC1.81□□□□□ -2.12
Col5a1O88207 Gm10719-201ENSMUST00000099047 681 ntAPPRIS P5 TSL 5 BASIC1.81□□□□□ -2.12
Col5a1O88207 Olfr1167-201ENSMUST00000099832 1100 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
Col5a1O88207 AC124426.1-203ENSMUST00000221814 1362 ntBASIC1.81□□□□□ -2.12
Col5a1O88207 AC134917.1-201ENSMUST00000220517 1449 ntBASIC1.81□□□□□ -2.12
Col5a1O88207 Gm45872-201ENSMUST00000209804 1584 ntBASIC1.8□□□□□ -2.12
Col5a1O88207 Zfp640-202ENSMUST00000224116 1562 ntBASIC1.8□□□□□ -2.12
Col5a1O88207 Mir301b-201ENSMUST00000102333 97 ntBASIC1.8□□□□□ -2.12
Col5a1O88207 Gm25728-201ENSMUST00000104525 159 ntBASIC1.8□□□□□ -2.12
Col5a1O88207 Gm14322-201ENSMUST00000108942 1074 ntTSL 2 BASIC1.8□□□□□ -2.12
Col5a1O88207 Olfr379-ps1-201ENSMUST00000117349 934 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
Col5a1O88207 Gm12891-201ENSMUST00000119358 240 ntBASIC1.8□□□□□ -2.12
Col5a1O88207 Gm14887-201ENSMUST00000119522 663 ntBASIC1.8□□□□□ -2.12
Col5a1O88207 Gm15760-201ENSMUST00000119553 283 ntBASIC1.8□□□□□ -2.12
Col5a1O88207 Rab9b-ps1-201ENSMUST00000119785 606 ntBASIC1.8□□□□□ -2.12
Col5a1O88207 Gm14322-202ENSMUST00000119838 1077 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
Col5a1O88207 Gm14927-201ENSMUST00000120283 454 ntBASIC1.8□□□□□ -2.12
Col5a1O88207 Gm14418-202ENSMUST00000128657 1077 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
Col5a1O88207 Gm24910-201ENSMUST00000157289 272 ntBASIC1.8□□□□□ -2.12
Col5a1O88207 Gm22316-201ENSMUST00000158012 216 ntBASIC1.8□□□□□ -2.12
Col5a1O88207 Gm23022-201ENSMUST00000158768 180 ntBASIC1.8□□□□□ -2.12
Col5a1O88207 Gm17196-201ENSMUST00000164074 345 ntTSL 5 BASIC1.8□□□□□ -2.12
Col5a1O88207 Gm9593-201ENSMUST00000166034 469 ntBASIC1.8□□□□□ -2.12
Col5a1O88207 Gm18354-201ENSMUST00000173515 1068 ntBASIC1.8□□□□□ -2.12
Col5a1O88207 Vmn1r-ps152-201ENSMUST00000176452 699 ntBASIC1.8□□□□□ -2.12
Col5a1O88207 Mir669a-7-201ENSMUST00000180364 87 ntBASIC1.8□□□□□ -2.12
Col5a1O88207 Mir7678-201ENSMUST00000185076 71 ntBASIC1.8□□□□□ -2.12
Col5a1O88207 Gm28802-201ENSMUST00000188624 944 ntBASIC1.8□□□□□ -2.12
Col5a1O88207 Gm38353-201ENSMUST00000192351 617 ntTSL 3 BASIC1.8□□□□□ -2.12
Col5a1O88207 Gm38045-201ENSMUST00000193536 199 ntTSL 5 BASIC1.8□□□□□ -2.12
Col5a1O88207 Mir669a-6-201ENSMUST00000196127 87 ntBASIC1.8□□□□□ -2.12
Col5a1O88207 Mir669a-12-201ENSMUST00000197274 87 ntBASIC1.8□□□□□ -2.12
Col5a1O88207 Mir669a-5-201ENSMUST00000197439 87 ntBASIC1.8□□□□□ -2.12
Col5a1O88207 Mir669a-10-201ENSMUST00000197745 87 ntBASIC1.8□□□□□ -2.12
Col5a1O88207 Mir669a-11-201ENSMUST00000197952 87 ntBASIC1.8□□□□□ -2.12
Col5a1O88207 Mir669a-4-201ENSMUST00000198665 87 ntBASIC1.8□□□□□ -2.12
Col5a1O88207 Mir669a-9-201ENSMUST00000200087 87 ntBASIC1.8□□□□□ -2.12
Col5a1O88207 Mir669a-8-201ENSMUST00000200268 87 ntBASIC1.8□□□□□ -2.12
Col5a1O88207 Gm44059-201ENSMUST00000204048 351 ntBASIC1.8□□□□□ -2.12
Col5a1O88207 Olfr192-202ENSMUST00000205727 1141 ntAPPRIS P1 TSL 2 BASIC1.8□□□□□ -2.12
Col5a1O88207 AC091260.1-201ENSMUST00000216112 229 ntBASIC1.8□□□□□ -2.12
Col5a1O88207 Gm46146-201ENSMUST00000217483 346 ntBASIC1.8□□□□□ -2.12
Col5a1O88207 AC140285.1-201ENSMUST00000220472 452 ntTSL 3 BASIC1.8□□□□□ -2.12
Col5a1O88207 Tslp-201ENSMUST00000025237 1133 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
Col5a1O88207 Vmn1r75-201ENSMUST00000057229 918 ntAPPRIS P2 BASIC1.8□□□□□ -2.12
Col5a1O88207 Gm23347-201ENSMUST00000083823 82 ntBASIC1.8□□□□□ -2.12
Col5a1O88207 Olfr1291-ps1-201ENSMUST00000121345 5403 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
Col5a1O88207 Olfr183-202ENSMUST00000206303 1862 ntAPPRIS P1 TSL 3 BASIC1.8□□□□□ -2.12
Col5a1O88207 Mir208b-201ENSMUST00000104735 77 ntBASIC1.8□□□□□ -2.12
Col5a1O88207 Cypt15-201ENSMUST00000115114 519 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
Col5a1O88207 Gm25773-201ENSMUST00000116718 127 ntBASIC1.8□□□□□ -2.12
Col5a1O88207 Gm12393-201ENSMUST00000117084 848 ntBASIC1.8□□□□□ -2.12
Col5a1O88207 Gm12433-201ENSMUST00000119659 255 ntBASIC1.8□□□□□ -2.12
Col5a1O88207 Gm13661-201ENSMUST00000154297 318 ntTSL 3 BASIC1.8□□□□□ -2.12
Col5a1O88207 Esp24-201ENSMUST00000180245 207 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
Col5a1O88207 Anks1b-207ENSMUST00000182045 544 ntTSL 3 BASIC1.8□□□□□ -2.12
Col5a1O88207 Gm37727-201ENSMUST00000191637 819 ntBASIC1.8□□□□□ -2.12
Col5a1O88207 Gm37418-201ENSMUST00000195031 274 ntBASIC1.8□□□□□ -2.12
Col5a1O88207 Gm43096-201ENSMUST00000196173 421 ntBASIC1.8□□□□□ -2.12
Col5a1O88207 Gm44254-201ENSMUST00000204184 322 ntBASIC1.8□□□□□ -2.12
Col5a1O88207 Gm6112-201ENSMUST00000208037 629 ntBASIC1.8□□□□□ -2.12
Col5a1O88207 Gm18645-201ENSMUST00000209593 651 ntBASIC1.8□□□□□ -2.12
Col5a1O88207 AC153541.1-201ENSMUST00000213786 294 ntBASIC1.8□□□□□ -2.12
Col5a1O88207 Olfr989-ps1-201ENSMUST00000214405 912 ntBASIC1.8□□□□□ -2.12
Col5a1O88207 Olfr1324-203ENSMUST00000219631 1152 ntAPPRIS P2 BASIC1.8□□□□□ -2.12
Col5a1O88207 AC154552.4-201ENSMUST00000222171 151 ntBASIC1.8□□□□□ -2.12
Col5a1O88207 AC162857.1-201ENSMUST00000226614 400 ntBASIC1.8□□□□□ -2.12
Col5a1O88207 AC109172.1-201ENSMUST00000227503 187 ntBASIC1.8□□□□□ -2.12
Col5a1O88207 Olfr1324-201ENSMUST00000050044 1152 ntAPPRIS ALT2 BASIC1.8□□□□□ -2.12
Retrieved 100 of 76,532 protein–RNA pairs in 83.6 ms