Protein–RNA interactions for Protein: O55017

Cacna1b, Voltage-dependent N-type calcium channel subunit alpha-1B, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1bO55017 Gm38127-201ENSMUST00000191978 468 ntTSL 5 BASIC1.31□□□□□ -2.2
Cacna1bO55017 Gm37824-201ENSMUST00000193430 3236 ntBASIC1.31□□□□□ -2.2
Cacna1bO55017 Gm42796-201ENSMUST00000199913 1087 ntBASIC1.31□□□□□ -2.2
Cacna1bO55017 Gm36669-201ENSMUST00000201757 3650 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
Cacna1bO55017 Gm44404-201ENSMUST00000203979 636 ntBASIC1.31□□□□□ -2.2
Cacna1bO55017 Gm16351-202ENSMUST00000209660 337 ntTSL 5 BASIC1.31□□□□□ -2.2
Cacna1bO55017 Olfr1035-ps1-202ENSMUST00000213364 288 ntTSL 5 BASIC1.31□□□□□ -2.2
Cacna1bO55017 Olfr953-ps1-201ENSMUST00000214463 892 ntBASIC1.31□□□□□ -2.2
Cacna1bO55017 AC154257.2-201ENSMUST00000224166 340 ntBASIC1.31□□□□□ -2.2
Cacna1bO55017 AC168062.2-201ENSMUST00000228907 422 ntBASIC1.31□□□□□ -2.2
Cacna1bO55017 Gm42524-201ENSMUST00000202881 2214 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
Cacna1bO55017 AC154511.1-201ENSMUST00000222578 1587 ntBASIC1.3□□□□□ -2.2
Cacna1bO55017 Gm24579-201ENSMUST00000103964 144 ntBASIC1.3□□□□□ -2.2
Cacna1bO55017 Gm25097-201ENSMUST00000104042 145 ntBASIC1.3□□□□□ -2.2
Cacna1bO55017 Gm23126-201ENSMUST00000104260 134 ntBASIC1.3□□□□□ -2.2
Cacna1bO55017 Gm15126-201ENSMUST00000118631 833 ntBASIC1.3□□□□□ -2.2
Cacna1bO55017 Gm13901-201ENSMUST00000137252 468 ntBASIC1.3□□□□□ -2.2
Cacna1bO55017 Prl2c5-204ENSMUST00000151144 623 ntTSL 2 BASIC1.3□□□□□ -2.2
Cacna1bO55017 Gm24060-201ENSMUST00000157494 95 ntBASIC1.3□□□□□ -2.2
Cacna1bO55017 Gm23587-201ENSMUST00000157658 84 ntBASIC1.3□□□□□ -2.2
Cacna1bO55017 Gm20534-201ENSMUST00000172957 172 ntBASIC1.3□□□□□ -2.2
Cacna1bO55017 1700010K23Rik-201ENSMUST00000174502 376 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
Cacna1bO55017 Vmn1r-ps8-201ENSMUST00000177200 838 ntBASIC1.3□□□□□ -2.2
Cacna1bO55017 Gm23151-201ENSMUST00000178061 107 ntBASIC1.3□□□□□ -2.2
Cacna1bO55017 Gm10925-201ENSMUST00000189941 678 ntBASIC1.3□□□□□ -2.2
Cacna1bO55017 Gm37979-201ENSMUST00000193065 712 ntBASIC1.3□□□□□ -2.2
Cacna1bO55017 1700052H01Rik-202ENSMUST00000196973 429 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
Cacna1bO55017 Gm43407-201ENSMUST00000199816 317 ntBASIC1.3□□□□□ -2.2
Cacna1bO55017 Gm45268-201ENSMUST00000210046 370 ntBASIC1.3□□□□□ -2.2
Cacna1bO55017 AC141895.1-201ENSMUST00000218141 273 ntBASIC1.3□□□□□ -2.2
Cacna1bO55017 AC124524.1-201ENSMUST00000225833 181 ntBASIC1.3□□□□□ -2.2
Cacna1bO55017 AC101945.3-201ENSMUST00000226568 153 ntBASIC1.3□□□□□ -2.2
Cacna1bO55017 AC161572.1-201ENSMUST00000227486 640 ntBASIC1.3□□□□□ -2.2
Cacna1bO55017 4933400A11Rik-202ENSMUST00000068894 1217 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
Cacna1bO55017 Mucl1-201ENSMUST00000078842 621 ntAPPRIS ALT2 BASIC1.3□□□□□ -2.2
Cacna1bO55017 Rps24-ps2-201ENSMUST00000091375 395 ntBASIC1.3□□□□□ -2.2
Cacna1bO55017 Gm25506-201ENSMUST00000104339 70 ntBASIC1.29□□□□□ -2.2
Cacna1bO55017 Gm24555-201ENSMUST00000104548 124 ntBASIC1.29□□□□□ -2.2
Cacna1bO55017 Gm11367-201ENSMUST00000117802 120 ntBASIC1.29□□□□□ -2.2
Cacna1bO55017 Gm26099-201ENSMUST00000157248 109 ntBASIC1.29□□□□□ -2.2
Cacna1bO55017 Gm22111-201ENSMUST00000178010 79 ntBASIC1.29□□□□□ -2.2
Cacna1bO55017 Gm23687-201ENSMUST00000178664 79 ntBASIC1.29□□□□□ -2.2
Cacna1bO55017 Gm24566-201ENSMUST00000179286 79 ntBASIC1.29□□□□□ -2.2
Cacna1bO55017 Gm23305-201ENSMUST00000179342 79 ntBASIC1.29□□□□□ -2.2
Cacna1bO55017 Gm26389-201ENSMUST00000179819 79 ntBASIC1.29□□□□□ -2.2
Cacna1bO55017 Gm22130-201ENSMUST00000179979 79 ntBASIC1.29□□□□□ -2.2
Cacna1bO55017 Gm22393-201ENSMUST00000180153 79 ntBASIC1.29□□□□□ -2.2
Cacna1bO55017 Gm25085-201ENSMUST00000180298 79 ntBASIC1.29□□□□□ -2.2
Cacna1bO55017 Gm28347-201ENSMUST00000185380 382 ntTSL 2 BASIC1.29□□□□□ -2.2
Cacna1bO55017 Gm28437-201ENSMUST00000190277 783 ntBASIC1.29□□□□□ -2.2
Cacna1bO55017 Gm37281-201ENSMUST00000192412 439 ntBASIC1.29□□□□□ -2.2
Cacna1bO55017 Gm18964-201ENSMUST00000193013 563 ntBASIC1.29□□□□□ -2.2
Cacna1bO55017 Sprr2c-ps-201ENSMUST00000195581 301 ntBASIC1.29□□□□□ -2.2
Cacna1bO55017 Gm42454-201ENSMUST00000196805 1181 ntBASIC1.29□□□□□ -2.2
Cacna1bO55017 Gm43109-201ENSMUST00000198269 753 ntTSL 3 BASIC1.29□□□□□ -2.2
Cacna1bO55017 Gm45049-201ENSMUST00000207586 591 ntBASIC1.29□□□□□ -2.2
Cacna1bO55017 Gm45313-201ENSMUST00000210584 178 ntBASIC1.29□□□□□ -2.2
Cacna1bO55017 AC163664.1-201ENSMUST00000226251 1248 ntBASIC1.29□□□□□ -2.2
Cacna1bO55017 Mucl1-202ENSMUST00000226484 758 ntAPPRIS P5 BASIC1.29□□□□□ -2.2
Cacna1bO55017 Gm10800-201ENSMUST00000099683 660 ntAPPRIS P1 TSL 5 BASIC1.29□□□□□ -2.2
Cacna1bO55017 Olfr1109-202ENSMUST00000214636 2483 ntAPPRIS P1 TSL 5 BASIC1.29□□□□□ -2.2
Cacna1bO55017 Pate3-201ENSMUST00000178236 1329 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
Cacna1bO55017 Gm44286-201ENSMUST00000204098 1487 ntBASIC1.29□□□□□ -2.2
Cacna1bO55017 AC153966.1-201ENSMUST00000220106 3764 ntBASIC1.29□□□□□ -2.2
Cacna1bO55017 Gm13574-201ENSMUST00000120482 394 ntBASIC1.29□□□□□ -2.2
Cacna1bO55017 Gm22516-201ENSMUST00000158266 124 ntBASIC1.29□□□□□ -2.2
Cacna1bO55017 Gm24546-201ENSMUST00000158652 102 ntBASIC1.29□□□□□ -2.2
Cacna1bO55017 Gm17204-201ENSMUST00000167936 478 ntBASIC1.29□□□□□ -2.2
Cacna1bO55017 Gm7346-201ENSMUST00000169661 476 ntBASIC1.29□□□□□ -2.2
Cacna1bO55017 Gm25248-201ENSMUST00000175473 98 ntBASIC1.29□□□□□ -2.2
Cacna1bO55017 Gm6113-201ENSMUST00000180319 639 ntBASIC1.29□□□□□ -2.2
Cacna1bO55017 Gm29051-201ENSMUST00000190184 369 ntTSL 5 BASIC1.29□□□□□ -2.2
Cacna1bO55017 Trbv12-3-201ENSMUST00000192675 372 ntBASIC1.29□□□□□ -2.2
Cacna1bO55017 Gm29740-201ENSMUST00000193182 655 ntBASIC1.29□□□□□ -2.2
Cacna1bO55017 Gm37119-201ENSMUST00000195691 389 ntBASIC1.29□□□□□ -2.2
Cacna1bO55017 Gm44487-201ENSMUST00000205145 325 ntBASIC1.29□□□□□ -2.2
Cacna1bO55017 Gm18645-202ENSMUST00000212222 760 ntBASIC1.29□□□□□ -2.2
Cacna1bO55017 Gm19233-201ENSMUST00000219772 936 ntBASIC1.29□□□□□ -2.2
Cacna1bO55017 Gm23850-201ENSMUST00000083830 169 ntBASIC1.29□□□□□ -2.2
Cacna1bO55017 Gm22353-201ENSMUST00000083918 136 ntBASIC1.29□□□□□ -2.2
Cacna1bO55017 Gm7648-201ENSMUST00000173036 1658 ntBASIC1.29□□□□□ -2.2
Cacna1bO55017 Gm44679-201ENSMUST00000207202 2908 ntBASIC1.28□□□□□ -2.2
Cacna1bO55017 Mir208b-201ENSMUST00000104735 77 ntBASIC1.28□□□□□ -2.2
Cacna1bO55017 Vmn1r2-201ENSMUST00000105160 921 ntAPPRIS P1 BASIC1.28□□□□□ -2.2
Cacna1bO55017 Gm22957-201ENSMUST00000122511 123 ntBASIC1.28□□□□□ -2.2
Cacna1bO55017 Gm22561-201ENSMUST00000157331 84 ntBASIC1.28□□□□□ -2.2
Cacna1bO55017 Gm20619-204ENSMUST00000181343 786 ntTSL 5 BASIC1.28□□□□□ -2.2
Cacna1bO55017 Gm29648-201ENSMUST00000188651 650 ntTSL 5 BASIC1.28□□□□□ -2.2
Cacna1bO55017 Gm42533-201ENSMUST00000196247 157 ntBASIC1.28□□□□□ -2.2
Cacna1bO55017 Igkv20-101-2-201ENSMUST00000200406 339 ntAPPRIS P1 BASIC1.28□□□□□ -2.2
Cacna1bO55017 Gm45742-201ENSMUST00000212400 433 ntBASIC1.28□□□□□ -2.2
Cacna1bO55017 Gm18039-201ENSMUST00000217816 728 ntBASIC1.28□□□□□ -2.2
Cacna1bO55017 Gm29809-201ENSMUST00000218423 493 ntBASIC1.28□□□□□ -2.2
Cacna1bO55017 Gm25856-201ENSMUST00000082786 75 ntBASIC1.28□□□□□ -2.2
Cacna1bO55017 Gm14800-201ENSMUST00000122084 1272 ntBASIC1.28□□□□□ -2.2
Cacna1bO55017 Gm22026-201ENSMUST00000122735 281 ntBASIC1.28□□□□□ -2.2
Cacna1bO55017 Gm3848-201ENSMUST00000136693 299 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
Cacna1bO55017 Gm22794-201ENSMUST00000157228 306 ntBASIC1.28□□□□□ -2.2
Cacna1bO55017 Gm24875-201ENSMUST00000158888 104 ntBASIC1.28□□□□□ -2.2
Cacna1bO55017 1700101O22Rik-201ENSMUST00000187396 339 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
Retrieved 100 of 76,532 protein–RNA pairs in 112 ms