Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Gm15112-201ENSMUST00000120152 860 ntBASIC1.43□□□□□ -2.18
Hmgb3O54879 Slc7a12-202ENSMUST00000120484 1010 ntTSL 5 BASIC1.43□□□□□ -2.18
Hmgb3O54879 Gm11430-201ENSMUST00000121317 217 ntBASIC1.43□□□□□ -2.18
Hmgb3O54879 Gm14694-201ENSMUST00000121856 282 ntBASIC1.43□□□□□ -2.18
Hmgb3O54879 Gm22382-201ENSMUST00000158185 130 ntBASIC1.43□□□□□ -2.18
Hmgb3O54879 Olfr180-201ENSMUST00000171656 1154 ntAPPRIS P2 TSL 2 BASIC1.43□□□□□ -2.18
Hmgb3O54879 Olfr306-ps1-201ENSMUST00000174677 743 ntBASIC1.43□□□□□ -2.18
Hmgb3O54879 Gm21828-201ENSMUST00000178050 543 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
Hmgb3O54879 Gm21725-201ENSMUST00000178519 543 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
Hmgb3O54879 Gm21852-201ENSMUST00000179125 543 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
Hmgb3O54879 Gm21764-201ENSMUST00000179219 543 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
Hmgb3O54879 Gm21891-201ENSMUST00000179284 543 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
Hmgb3O54879 Gm21904-201ENSMUST00000179522 543 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
Hmgb3O54879 Gm26622-201ENSMUST00000180520 298 ntBASIC1.43□□□□□ -2.18
Hmgb3O54879 Gm20837-202ENSMUST00000190558 844 ntAPPRIS P1 TSL 5 BASIC1.43□□□□□ -2.18
Hmgb3O54879 Gm33354-201ENSMUST00000195448 906 ntBASIC1.43□□□□□ -2.18
Hmgb3O54879 Olfr1468-ps1-201ENSMUST00000207287 1208 ntAPPRIS P1 TSL 5 BASIC1.43□□□□□ -2.18
Hmgb3O54879 AC069561.3-201ENSMUST00000217321 114 ntBASIC1.43□□□□□ -2.18
Hmgb3O54879 AC113031.4-201ENSMUST00000228381 514 ntBASIC1.43□□□□□ -2.18
Hmgb3O54879 Olfr952-201ENSMUST00000073895 1056 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
Hmgb3O54879 Olfr1453-201ENSMUST00000087773 924 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
Hmgb3O54879 Hsf3-202ENSMUST00000119035 2691 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
Hmgb3O54879 AC122887.2-201ENSMUST00000219465 1603 ntBASIC1.43□□□□□ -2.18
Hmgb3O54879 Gm36989-201ENSMUST00000193225 2160 ntBASIC1.42□□□□□ -2.18
Hmgb3O54879 Vmn2r-ps83-201ENSMUST00000173787 2368 ntBASIC1.42□□□□□ -2.18
Hmgb3O54879 Olfr143-202ENSMUST00000213129 3449 ntAPPRIS ALT2 TSL 5 BASIC1.42□□□□□ -2.18
Hmgb3O54879 Gm9043-201ENSMUST00000119677 314 ntBASIC1.42□□□□□ -2.18
Hmgb3O54879 Gm13942-201ENSMUST00000136950 325 ntTSL 3 BASIC1.42□□□□□ -2.18
Hmgb3O54879 Mir6926-201ENSMUST00000184562 68 ntBASIC1.42□□□□□ -2.18
Hmgb3O54879 Gm7967-201ENSMUST00000190991 399 ntTSL 3 BASIC1.42□□□□□ -2.18
Hmgb3O54879 Gm19694-201ENSMUST00000192364 505 ntBASIC1.42□□□□□ -2.18
Hmgb3O54879 Gm38039-201ENSMUST00000195328 443 ntTSL 5 BASIC1.42□□□□□ -2.18
Hmgb3O54879 Gm40040-202ENSMUST00000196337 305 ntTSL 3 BASIC1.42□□□□□ -2.18
Hmgb3O54879 AC172027.1-201ENSMUST00000217659 337 ntBASIC1.42□□□□□ -2.18
Hmgb3O54879 AC167202.1-201ENSMUST00000219027 331 ntBASIC1.42□□□□□ -2.18
Hmgb3O54879 Skint11-201ENSMUST00000079915 820 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
Hmgb3O54879 Gm22740-201ENSMUST00000083439 109 ntBASIC1.42□□□□□ -2.18
Hmgb3O54879 Olfr867-203ENSMUST00000216538 4617 ntAPPRIS P1 TSL 5 BASIC1.42□□□□□ -2.18
Hmgb3O54879 Olfr857-202ENSMUST00000212013 2306 ntAPPRIS P1 TSL 3 BASIC1.41□□□□□ -2.18
Hmgb3O54879 Gm2348-201ENSMUST00000108782 300 ntBASIC1.41□□□□□ -2.18
Hmgb3O54879 Zfp972-203ENSMUST00000108986 192 ntTSL 5 BASIC1.41□□□□□ -2.18
Hmgb3O54879 Gm12765-201ENSMUST00000117273 615 ntBASIC1.41□□□□□ -2.18
Hmgb3O54879 Gm11854-201ENSMUST00000117839 446 ntBASIC1.41□□□□□ -2.18
Hmgb3O54879 Gm13087-201ENSMUST00000118298 256 ntBASIC1.41□□□□□ -2.18
Hmgb3O54879 Cyp4b1-ps1-201ENSMUST00000118753 315 ntBASIC1.41□□□□□ -2.18
Hmgb3O54879 Mup-ps1-201ENSMUST00000120720 544 ntBASIC1.41□□□□□ -2.18
Hmgb3O54879 Gm11786-201ENSMUST00000120799 155 ntBASIC1.41□□□□□ -2.18
Hmgb3O54879 Gm14629-201ENSMUST00000122428 144 ntBASIC1.41□□□□□ -2.18
Hmgb3O54879 2210417A02Rik-201ENSMUST00000150265 550 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
Hmgb3O54879 Mup-ps4-201ENSMUST00000151005 539 ntBASIC1.41□□□□□ -2.18
Hmgb3O54879 Gm15243-201ENSMUST00000151101 382 ntTSL 2 BASIC1.41□□□□□ -2.18
Hmgb3O54879 Gm22891-201ENSMUST00000158641 164 ntBASIC1.41□□□□□ -2.18
Hmgb3O54879 Mup-ps11-201ENSMUST00000178040 545 ntBASIC1.41□□□□□ -2.18
Hmgb3O54879 Mup-ps7-201ENSMUST00000178292 545 ntBASIC1.41□□□□□ -2.18
Hmgb3O54879 Mup-ps3-201ENSMUST00000178315 545 ntBASIC1.41□□□□□ -2.18
Hmgb3O54879 Mup-ps8-201ENSMUST00000178663 545 ntBASIC1.41□□□□□ -2.18
Hmgb3O54879 Mup-ps9-201ENSMUST00000178847 545 ntBASIC1.41□□□□□ -2.18
Hmgb3O54879 Mup-ps6-201ENSMUST00000179564 545 ntBASIC1.41□□□□□ -2.18
Hmgb3O54879 Gm3543-202ENSMUST00000179947 231 ntTSL 5 BASIC1.41□□□□□ -2.18
Hmgb3O54879 Mir7667-201ENSMUST00000183866 63 ntBASIC1.41□□□□□ -2.18
Hmgb3O54879 Scgb3a2-203ENSMUST00000189750 578 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
Hmgb3O54879 Gm7039-201ENSMUST00000205138 346 ntBASIC1.41□□□□□ -2.18
Hmgb3O54879 Gm44881-201ENSMUST00000205425 367 ntBASIC1.41□□□□□ -2.18
Hmgb3O54879 4930522H14Rik-201ENSMUST00000082306 849 ntAPPRIS ALT2 TSL 1 (best) BASIC1.41□□□□□ -2.18
Hmgb3O54879 Gm25788-201ENSMUST00000082721 131 ntBASIC1.41□□□□□ -2.18
Hmgb3O54879 Gm21286-201ENSMUST00000098035 545 ntBASIC1.41□□□□□ -2.18
Hmgb3O54879 Gm15292-201ENSMUST00000098895 385 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
Hmgb3O54879 Gm12580-201ENSMUST00000127456 1751 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
Hmgb3O54879 Olfr1148-202ENSMUST00000215230 3095 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
Hmgb3O54879 Olfr791-202ENSMUST00000217228 2502 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.18
Hmgb3O54879 4930524B17Rik-201ENSMUST00000200755 1870 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
Hmgb3O54879 Gm25529-201ENSMUST00000104850 92 ntBASIC1.4□□□□□ -2.19
Hmgb3O54879 Gm7429-201ENSMUST00000118664 348 ntBASIC1.4□□□□□ -2.19
Hmgb3O54879 Gm24716-201ENSMUST00000157524 104 ntBASIC1.4□□□□□ -2.19
Hmgb3O54879 Gm23587-201ENSMUST00000157658 84 ntBASIC1.4□□□□□ -2.19
Hmgb3O54879 Gm24222-201ENSMUST00000158834 93 ntBASIC1.4□□□□□ -2.19
Hmgb3O54879 Ear-ps4-201ENSMUST00000166834 450 ntBASIC1.4□□□□□ -2.19
Hmgb3O54879 Gm24969-201ENSMUST00000180331 79 ntBASIC1.4□□□□□ -2.19
Hmgb3O54879 Gm26864-201ENSMUST00000181346 156 ntBASIC1.4□□□□□ -2.19
Hmgb3O54879 Gm18775-201ENSMUST00000190763 586 ntBASIC1.4□□□□□ -2.19
Hmgb3O54879 Olfr1439-ps1-201ENSMUST00000207089 824 ntBASIC1.4□□□□□ -2.19
Hmgb3O54879 Gm44533-201ENSMUST00000207782 268 ntBASIC1.4□□□□□ -2.19
Hmgb3O54879 A730009L09Rik-202ENSMUST00000210306 201 ntAPPRIS ALT2 TSL 5 BASIC1.4□□□□□ -2.19
Hmgb3O54879 Gm35548-201ENSMUST00000214348 441 ntTSL 5 BASIC1.4□□□□□ -2.19
Hmgb3O54879 Olfr1059-ps1-201ENSMUST00000215214 586 ntBASIC1.4□□□□□ -2.19
Hmgb3O54879 Gm30738-201ENSMUST00000221346 502 ntBASIC1.4□□□□□ -2.19
Hmgb3O54879 Vmn2r-ps102-203ENSMUST00000222739 604 ntTSL 5 BASIC1.4□□□□□ -2.19
Hmgb3O54879 Olfr731-201ENSMUST00000059565 981 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
Hmgb3O54879 Gm26055-201ENSMUST00000083038 107 ntBASIC1.4□□□□□ -2.19
Hmgb3O54879 Mir107-201ENSMUST00000083660 87 ntBASIC1.4□□□□□ -2.19
Hmgb3O54879 Gm25411-201ENSMUST00000083760 151 ntBASIC1.4□□□□□ -2.19
Hmgb3O54879 Olfr1164-201ENSMUST00000099834 1112 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
Hmgb3O54879 Vmn1r73-202ENSMUST00000226516 6155 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
Hmgb3O54879 Gm20679-201ENSMUST00000177285 1402 ntBASIC1.4□□□□□ -2.19
Hmgb3O54879 Gm42635-201ENSMUST00000200266 2571 ntBASIC1.39□□□□□ -2.19
Hmgb3O54879 Igkv17-127-201ENSMUST00000103309 341 ntAPPRIS ALT2 BASIC1.39□□□□□ -2.19
Hmgb3O54879 Gm13510-201ENSMUST00000118659 429 ntBASIC1.39□□□□□ -2.19
Hmgb3O54879 Atp5k-ps2-201ENSMUST00000120437 210 ntBASIC1.39□□□□□ -2.19
Hmgb3O54879 Gm14426-201ENSMUST00000128562 249 ntTSL 3 BASIC1.39□□□□□ -2.19
Hmgb3O54879 Gm3848-201ENSMUST00000136693 299 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
Retrieved 100 of 76,532 protein–RNA pairs in 118.5 ms