Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Gm27016-201ENSMUST00000183294 715 ntTSL 5 BASIC3.71□□□□□ -1.82
Pcdh1F7BJK1 Gtpbp4-ps4-201ENSMUST00000184813 258 ntBASIC3.71□□□□□ -1.82
Pcdh1F7BJK1 Gm27286-201ENSMUST00000184934 179 ntBASIC3.71□□□□□ -1.82
Pcdh1F7BJK1 Gm37300-201ENSMUST00000193327 280 ntBASIC3.71□□□□□ -1.82
Pcdh1F7BJK1 Rnu3a-202ENSMUST00000196710 213 ntBASIC3.71□□□□□ -1.82
Pcdh1F7BJK1 Gm43236-201ENSMUST00000197414 313 ntTSL 5 BASIC3.71□□□□□ -1.82
Pcdh1F7BJK1 Mir3535-201ENSMUST00000197651 147 ntBASIC3.71□□□□□ -1.82
Pcdh1F7BJK1 Gm4045-201ENSMUST00000204076 310 ntBASIC3.71□□□□□ -1.82
Pcdh1F7BJK1 Gm44757-201ENSMUST00000206373 157 ntBASIC3.71□□□□□ -1.82
Pcdh1F7BJK1 Gm44871-201ENSMUST00000207821 497 ntBASIC3.71□□□□□ -1.82
Pcdh1F7BJK1 Calml4-204ENSMUST00000214633 394 ntTSL 3 BASIC3.71□□□□□ -1.82
Pcdh1F7BJK1 AC153526.4-201ENSMUST00000217713 379 ntBASIC3.71□□□□□ -1.82
Pcdh1F7BJK1 AC138401.2-201ENSMUST00000220461 365 ntBASIC3.71□□□□□ -1.82
Pcdh1F7BJK1 Gm35732-201ENSMUST00000221737 356 ntTSL 3 BASIC3.71□□□□□ -1.82
Pcdh1F7BJK1 AC173345.1-201ENSMUST00000222837 306 ntTSL 5 BASIC3.71□□□□□ -1.82
Pcdh1F7BJK1 Rnu3a-201ENSMUST00000083936 214 ntBASIC3.71□□□□□ -1.82
Pcdh1F7BJK1 Gm37045-201ENSMUST00000192016 2463 ntBASIC3.71□□□□□ -1.82
Pcdh1F7BJK1 Nexn-211ENSMUST00000199423 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
Pcdh1F7BJK1 Olfr815-202ENSMUST00000216182 2881 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
Pcdh1F7BJK1 Olfr111-203ENSMUST00000215424 2548 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
Pcdh1F7BJK1 Olfr1277-202ENSMUST00000214760 5944 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
Pcdh1F7BJK1 Ntrk3-201ENSMUST00000039431 19703 ntAPPRIS P2 TSL 1 (best) BASIC3.7□□□□□ -1.82
Pcdh1F7BJK1 AC154677.1-201ENSMUST00000227636 2805 ntBASIC3.7□□□□□ -1.82
Pcdh1F7BJK1 Olfr677-202ENSMUST00000213204 3227 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Pcdh1F7BJK1 Smpx-202ENSMUST00000112520 503 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Pcdh1F7BJK1 Gm13343-201ENSMUST00000116474 105 ntBASIC3.7□□□□□ -1.82
Pcdh1F7BJK1 Gm12328-201ENSMUST00000118611 197 ntBASIC3.7□□□□□ -1.82
Pcdh1F7BJK1 Gm23906-201ENSMUST00000157573 128 ntBASIC3.7□□□□□ -1.82
Pcdh1F7BJK1 Gm22314-201ENSMUST00000158007 281 ntBASIC3.7□□□□□ -1.82
Pcdh1F7BJK1 Gm22536-201ENSMUST00000158171 134 ntBASIC3.7□□□□□ -1.82
Pcdh1F7BJK1 Gm24224-201ENSMUST00000158828 258 ntBASIC3.7□□□□□ -1.82
Pcdh1F7BJK1 Gm20688-201ENSMUST00000176779 512 ntTSL 5 BASIC3.7□□□□□ -1.82
Pcdh1F7BJK1 Gm23355-201ENSMUST00000177614 107 ntBASIC3.7□□□□□ -1.82
Pcdh1F7BJK1 Gm23148-201ENSMUST00000180367 107 ntBASIC3.7□□□□□ -1.82
Pcdh1F7BJK1 Gm26962-201ENSMUST00000182545 265 ntTSL 3 BASIC3.7□□□□□ -1.82
Pcdh1F7BJK1 Gm27805-201ENSMUST00000184513 79 ntBASIC3.7□□□□□ -1.82
Pcdh1F7BJK1 Gm27899-201ENSMUST00000184715 64 ntBASIC3.7□□□□□ -1.82
Pcdh1F7BJK1 Gm27545-201ENSMUST00000184755 202 ntBASIC3.7□□□□□ -1.82
Pcdh1F7BJK1 Gm28364-201ENSMUST00000187908 334 ntTSL 3 BASIC3.7□□□□□ -1.82
Pcdh1F7BJK1 Gm37162-201ENSMUST00000191708 551 ntBASIC3.7□□□□□ -1.82
Pcdh1F7BJK1 Gm38183-201ENSMUST00000193189 205 ntBASIC3.7□□□□□ -1.82
Pcdh1F7BJK1 Igkv3-12-1-201ENSMUST00000197093 351 ntBASIC3.7□□□□□ -1.82
Pcdh1F7BJK1 Pgk1-ps3-201ENSMUST00000198338 1201 ntBASIC3.7□□□□□ -1.82
Pcdh1F7BJK1 AC174780.1-201ENSMUST00000199415 1107 ntBASIC3.7□□□□□ -1.82
Pcdh1F7BJK1 Gm6615-201ENSMUST00000199426 631 ntBASIC3.7□□□□□ -1.82
Pcdh1F7BJK1 Gm44073-201ENSMUST00000204173 429 ntTSL 3 BASIC3.7□□□□□ -1.82
Pcdh1F7BJK1 Gm35077-201ENSMUST00000204999 275 ntTSL 3 BASIC3.7□□□□□ -1.82
Pcdh1F7BJK1 Gm45600-201ENSMUST00000210828 234 ntTSL 5 BASIC3.7□□□□□ -1.82
Pcdh1F7BJK1 AC129219.3-201ENSMUST00000223790 196 ntBASIC3.7□□□□□ -1.82
Pcdh1F7BJK1 Vwc2l-203ENSMUST00000161937 4323 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Pcdh1F7BJK1 Cr2-212ENSMUST00000210219 4227 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Pcdh1F7BJK1 Olfr1369-ps1-203ENSMUST00000213922 3930 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Pcdh1F7BJK1 Vmn1r46-204ENSMUST00000228231 13338 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Pcdh1F7BJK1 Olfr821-203ENSMUST00000214177 1929 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Pcdh1F7BJK1 Cfap97-206ENSMUST00000164504 4521 ntAPPRIS P2 TSL 1 (best) BASIC3.69□□□□□ -1.82
Pcdh1F7BJK1 Gm14636-202ENSMUST00000150801 5060 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
Pcdh1F7BJK1 Btla-201ENSMUST00000063654 3235 ntAPPRIS P4 TSL 1 (best) BASIC3.69□□□□□ -1.82
Pcdh1F7BJK1 Abca5-201ENSMUST00000043961 8231 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
Pcdh1F7BJK1 Olfr1274-ps-202ENSMUST00000216111 3395 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Pcdh1F7BJK1 Gm26500-201ENSMUST00000101867 106 ntBASIC3.69□□□□□ -1.82
Pcdh1F7BJK1 Gm26387-201ENSMUST00000104238 132 ntBASIC3.69□□□□□ -1.82
Pcdh1F7BJK1 Gm24788-201ENSMUST00000104283 156 ntBASIC3.69□□□□□ -1.82
Pcdh1F7BJK1 Gm14816-201ENSMUST00000117174 294 ntBASIC3.69□□□□□ -1.82
Pcdh1F7BJK1 Gm14846-201ENSMUST00000121868 216 ntBASIC3.69□□□□□ -1.82
Pcdh1F7BJK1 Gm26479-201ENSMUST00000122620 106 ntBASIC3.69□□□□□ -1.82
Pcdh1F7BJK1 Gm12708-201ENSMUST00000126143 349 ntTSL 5 BASIC3.69□□□□□ -1.82
Pcdh1F7BJK1 Gm13943-201ENSMUST00000144043 343 ntTSL 5 BASIC3.69□□□□□ -1.82
Pcdh1F7BJK1 Gm13632-201ENSMUST00000150119 384 ntTSL 5 BASIC3.69□□□□□ -1.82
Pcdh1F7BJK1 Gm25220-201ENSMUST00000157546 95 ntBASIC3.69□□□□□ -1.82
Pcdh1F7BJK1 Gm24885-201ENSMUST00000158783 270 ntBASIC3.69□□□□□ -1.82
Pcdh1F7BJK1 Ubl5-209ENSMUST00000161882 489 ntTSL 3 BASIC3.69□□□□□ -1.82
Pcdh1F7BJK1 H2al2c-201ENSMUST00000163651 336 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Pcdh1F7BJK1 H2al2b-201ENSMUST00000168551 336 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Pcdh1F7BJK1 Gm7497-201ENSMUST00000183064 1003 ntBASIC3.69□□□□□ -1.82
Pcdh1F7BJK1 Gm27928-201ENSMUST00000183747 256 ntBASIC3.69□□□□□ -1.82
Pcdh1F7BJK1 Gm29232-201ENSMUST00000189100 297 ntTSL 5 BASIC3.69□□□□□ -1.82
Pcdh1F7BJK1 Gm6051-201ENSMUST00000201529 352 ntBASIC3.69□□□□□ -1.82
Pcdh1F7BJK1 Dnajc5g-202ENSMUST00000201740 581 ntAPPRIS ALT2 TSL 3 BASIC3.69□□□□□ -1.82
Pcdh1F7BJK1 Gm44145-201ENSMUST00000203711 172 ntTSL 3 BASIC3.69□□□□□ -1.82
Pcdh1F7BJK1 Gm44030-201ENSMUST00000204865 432 ntBASIC3.69□□□□□ -1.82
Pcdh1F7BJK1 Gm44784-201ENSMUST00000207396 460 ntTSL 5 BASIC3.69□□□□□ -1.82
Pcdh1F7BJK1 4930431P19Rik-201ENSMUST00000207570 451 ntBASIC3.69□□□□□ -1.82
Pcdh1F7BJK1 Olfr1304-ps1-201ENSMUST00000208032 189 ntBASIC3.69□□□□□ -1.82
Pcdh1F7BJK1 P2ry10-201ENSMUST00000053375 2888 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
Pcdh1F7BJK1 Gm18609-201ENSMUST00000203370 3601 ntBASIC3.69□□□□□ -1.82
Pcdh1F7BJK1 Gm36944-201ENSMUST00000192257 2759 ntBASIC3.69□□□□□ -1.82
Pcdh1F7BJK1 Gm21032-201ENSMUST00000208108 2578 ntBASIC3.69□□□□□ -1.82
Pcdh1F7BJK1 Tug1-202ENSMUST00000144852 4720 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
Pcdh1F7BJK1 AC121598.3-201ENSMUST00000227179 1643 ntBASIC3.69□□□□□ -1.82
Pcdh1F7BJK1 Mmrn1-201ENSMUST00000129603 4477 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
Pcdh1F7BJK1 Olfr1183-203ENSMUST00000219871 8353 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Pcdh1F7BJK1 Gm13912-201ENSMUST00000156541 1860 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
Pcdh1F7BJK1 Gm42659-201ENSMUST00000196955 1754 ntBASIC3.68□□□□□ -1.82
Pcdh1F7BJK1 Erbb4-201ENSMUST00000119142 11782 ntAPPRIS ALT1 TSL 5 BASIC3.68□□□□□ -1.82
Pcdh1F7BJK1 Ndst4-204ENSMUST00000173932 7417 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Pcdh1F7BJK1 Hfm1-202ENSMUST00000117588 4870 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Pcdh1F7BJK1 AC153150.1-201ENSMUST00000226065 3782 ntBASIC3.68□□□□□ -1.82
Pcdh1F7BJK1 Nebl-207ENSMUST00000132418 1734 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Pcdh1F7BJK1 Mir541-201ENSMUST00000102097 90 ntBASIC3.68□□□□□ -1.82
Pcdh1F7BJK1 Trbj1-4-201ENSMUST00000103287 51 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 87.6 ms