Protein–RNA interactions for Protein: A0A0B4J1G7

Trbv1, T cell receptor beta, variable 1 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv1A0A0B4J1G7 Ear10-202ENSMUST00000163652 471 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
Trbv1A0A0B4J1G7 Vmn1r-ps144-201ENSMUST00000177291 939 ntBASIC1.82□□□□□ -2.12
Trbv1A0A0B4J1G7 Gm8220-203ENSMUST00000177877 381 ntTSL 5 BASIC1.82□□□□□ -2.12
Trbv1A0A0B4J1G7 Gm25175-201ENSMUST00000178712 79 ntBASIC1.82□□□□□ -2.12
Trbv1A0A0B4J1G7 Gm23860-201ENSMUST00000179446 132 ntBASIC1.82□□□□□ -2.12
Trbv1A0A0B4J1G7 Gm3543-202ENSMUST00000179947 231 ntTSL 5 BASIC1.82□□□□□ -2.12
Trbv1A0A0B4J1G7 1700108N06Rik-201ENSMUST00000196572 681 ntTSL 5 BASIC1.82□□□□□ -2.12
Trbv1A0A0B4J1G7 Gm18341-201ENSMUST00000197538 622 ntBASIC1.82□□□□□ -2.12
Trbv1A0A0B4J1G7 Gm43232-201ENSMUST00000201346 364 ntBASIC1.82□□□□□ -2.12
Trbv1A0A0B4J1G7 Gm44609-201ENSMUST00000207157 460 ntBASIC1.82□□□□□ -2.12
Trbv1A0A0B4J1G7 Olfr175-ps1-202ENSMUST00000215069 1201 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
Trbv1A0A0B4J1G7 AC158803.1-201ENSMUST00000219495 316 ntBASIC1.82□□□□□ -2.12
Trbv1A0A0B4J1G7 AC091764.3-201ENSMUST00000219646 300 ntTSL 5 BASIC1.82□□□□□ -2.12
Trbv1A0A0B4J1G7 A430103D13Rik-201ENSMUST00000220077 857 ntBASIC1.82□□□□□ -2.12
Trbv1A0A0B4J1G7 AC155927.1-201ENSMUST00000220114 1200 ntTSL 5 BASIC1.82□□□□□ -2.12
Trbv1A0A0B4J1G7 AC138667.2-201ENSMUST00000224880 598 ntBASIC1.82□□□□□ -2.12
Trbv1A0A0B4J1G7 CT025525.2-201ENSMUST00000227743 423 ntBASIC1.82□□□□□ -2.12
Trbv1A0A0B4J1G7 AC137902.2-201ENSMUST00000227989 576 ntBASIC1.82□□□□□ -2.12
Trbv1A0A0B4J1G7 Zfp706-205ENSMUST00000228275 481 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
Trbv1A0A0B4J1G7 Olfr769-201ENSMUST00000050915 1084 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
Trbv1A0A0B4J1G7 Olfr1454-201ENSMUST00000073732 924 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
Trbv1A0A0B4J1G7 Olfr786-201ENSMUST00000076508 939 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
Trbv1A0A0B4J1G7 Olfr951-201ENSMUST00000078531 945 ntAPPRIS P2 BASIC1.82□□□□□ -2.12
Trbv1A0A0B4J1G7 Olfr175-ps1-201ENSMUST00000079955 1169 ntAPPRIS P1 TSL 2 BASIC1.82□□□□□ -2.12
Trbv1A0A0B4J1G7 n-R5s197-201ENSMUST00000083302 119 ntBASIC1.82□□□□□ -2.12
Trbv1A0A0B4J1G7 Spink11-201ENSMUST00000097587 746 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
Trbv1A0A0B4J1G7 Gm37895-201ENSMUST00000192448 4550 ntBASIC1.82□□□□□ -2.12
Trbv1A0A0B4J1G7 Gm14429-201ENSMUST00000121881 2024 ntBASIC1.82□□□□□ -2.12
Trbv1A0A0B4J1G7 AC169038.1-201ENSMUST00000227378 1352 ntBASIC1.82□□□□□ -2.12
Trbv1A0A0B4J1G7 4930430A15Rik-201ENSMUST00000028577 1840 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
Trbv1A0A0B4J1G7 Ccdc7b-201ENSMUST00000026912 1447 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
Trbv1A0A0B4J1G7 Vmn1r19-201ENSMUST00000089830 2255 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
Trbv1A0A0B4J1G7 Gm45257-201ENSMUST00000210301 3998 ntBASIC1.82□□□□□ -2.12
Trbv1A0A0B4J1G7 Knl1-202ENSMUST00000028802 7800 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
Trbv1A0A0B4J1G7 Gm38071-201ENSMUST00000195792 3378 ntBASIC1.81□□□□□ -2.12
Trbv1A0A0B4J1G7 Tlr8-202ENSMUST00000112170 3431 ntAPPRIS P1 TSL 2 BASIC1.81□□□□□ -2.12
Trbv1A0A0B4J1G7 Gm3081-201ENSMUST00000193413 3025 ntBASIC1.81□□□□□ -2.12
Trbv1A0A0B4J1G7 Gm24670-201ENSMUST00000104154 132 ntBASIC1.81□□□□□ -2.12
Trbv1A0A0B4J1G7 Gm14868-201ENSMUST00000117840 216 ntBASIC1.81□□□□□ -2.12
Trbv1A0A0B4J1G7 Gm11357-201ENSMUST00000119758 954 ntBASIC1.81□□□□□ -2.12
Trbv1A0A0B4J1G7 Gm11438-201ENSMUST00000121582 189 ntBASIC1.81□□□□□ -2.12
Trbv1A0A0B4J1G7 Gm8080-201ENSMUST00000122046 1155 ntBASIC1.81□□□□□ -2.12
Trbv1A0A0B4J1G7 Gm14100-201ENSMUST00000125575 651 ntTSL 3 BASIC1.81□□□□□ -2.12
Trbv1A0A0B4J1G7 Gm13200-201ENSMUST00000138802 258 ntTSL 3 BASIC1.81□□□□□ -2.12
Trbv1A0A0B4J1G7 4930473D10Rik-201ENSMUST00000161975 487 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
Trbv1A0A0B4J1G7 Vmn2r-ps80-201ENSMUST00000173697 914 ntBASIC1.81□□□□□ -2.12
Trbv1A0A0B4J1G7 Mir3964-201ENSMUST00000174898 74 ntBASIC1.81□□□□□ -2.12
Trbv1A0A0B4J1G7 Gm25156-201ENSMUST00000179809 79 ntBASIC1.81□□□□□ -2.12
Trbv1A0A0B4J1G7 Scgb2b14-ps-201ENSMUST00000189424 336 ntBASIC1.81□□□□□ -2.12
Trbv1A0A0B4J1G7 Gm6059-201ENSMUST00000196903 340 ntBASIC1.81□□□□□ -2.12
Trbv1A0A0B4J1G7 Gm43114-201ENSMUST00000198298 343 ntBASIC1.81□□□□□ -2.12
Trbv1A0A0B4J1G7 Gm7946-201ENSMUST00000203326 958 ntBASIC1.81□□□□□ -2.12
Trbv1A0A0B4J1G7 AC123803.1-201ENSMUST00000216093 189 ntBASIC1.81□□□□□ -2.12
Trbv1A0A0B4J1G7 Lilrb4a-205ENSMUST00000217705 1142 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
Trbv1A0A0B4J1G7 AC132384.11-201ENSMUST00000219676 178 ntBASIC1.81□□□□□ -2.12
Trbv1A0A0B4J1G7 AC153646.1-201ENSMUST00000223229 1279 ntBASIC1.81□□□□□ -2.12
Trbv1A0A0B4J1G7 AC124104.1-201ENSMUST00000226279 417 ntBASIC1.81□□□□□ -2.12
Trbv1A0A0B4J1G7 Gm37331-201ENSMUST00000192367 3375 ntBASIC1.81□□□□□ -2.12
Trbv1A0A0B4J1G7 Zfp640-202ENSMUST00000224116 1562 ntBASIC1.81□□□□□ -2.12
Trbv1A0A0B4J1G7 Zfy2-201ENSMUST00000115891 2816 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
Trbv1A0A0B4J1G7 Gm23744-201ENSMUST00000104231 149 ntBASIC1.8□□□□□ -2.12
Trbv1A0A0B4J1G7 Igkv13-87-201ENSMUST00000114214 286 ntBASIC1.8□□□□□ -2.12
Trbv1A0A0B4J1G7 Gm23078-201ENSMUST00000157848 148 ntBASIC1.8□□□□□ -2.12
Trbv1A0A0B4J1G7 Gm22611-201ENSMUST00000158288 150 ntBASIC1.8□□□□□ -2.12
Trbv1A0A0B4J1G7 Eif3s6-ps2-201ENSMUST00000163304 219 ntBASIC1.8□□□□□ -2.12
Trbv1A0A0B4J1G7 Vmn1r-ps86-201ENSMUST00000174052 547 ntBASIC1.8□□□□□ -2.12
Trbv1A0A0B4J1G7 Gm21828-201ENSMUST00000178050 543 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
Trbv1A0A0B4J1G7 Gm21866-201ENSMUST00000178428 543 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
Trbv1A0A0B4J1G7 Gm21725-201ENSMUST00000178519 543 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
Trbv1A0A0B4J1G7 Gm21800-201ENSMUST00000178559 543 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
Trbv1A0A0B4J1G7 Gm21852-201ENSMUST00000179125 543 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
Trbv1A0A0B4J1G7 Gm21764-201ENSMUST00000179219 543 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
Trbv1A0A0B4J1G7 Gm4076-201ENSMUST00000179230 965 ntBASIC1.8□□□□□ -2.12
Trbv1A0A0B4J1G7 Gm21891-201ENSMUST00000179284 543 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
Trbv1A0A0B4J1G7 Gm21904-201ENSMUST00000179522 543 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
Trbv1A0A0B4J1G7 Gm27659-201ENSMUST00000183472 98 ntBASIC1.8□□□□□ -2.12
Trbv1A0A0B4J1G7 Mir6916-201ENSMUST00000184514 63 ntBASIC1.8□□□□□ -2.12
Trbv1A0A0B4J1G7 Gm29335-201ENSMUST00000188361 459 ntBASIC1.8□□□□□ -2.12
Trbv1A0A0B4J1G7 Gm37743-201ENSMUST00000194645 376 ntBASIC1.8□□□□□ -2.12
Trbv1A0A0B4J1G7 Gm38154-201ENSMUST00000195444 340 ntBASIC1.8□□□□□ -2.12
Trbv1A0A0B4J1G7 Gm43284-201ENSMUST00000200103 253 ntBASIC1.8□□□□□ -2.12
Trbv1A0A0B4J1G7 Olfr210-ps1-201ENSMUST00000203138 905 ntBASIC1.8□□□□□ -2.12
Trbv1A0A0B4J1G7 AC117688.1-201ENSMUST00000213142 832 ntTSL 5 BASIC1.8□□□□□ -2.12
Trbv1A0A0B4J1G7 Gm46124-201ENSMUST00000215223 808 ntTSL 5 BASIC1.8□□□□□ -2.12
Trbv1A0A0B4J1G7 Lilr4b-211ENSMUST00000219661 1143 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
Trbv1A0A0B4J1G7 AC117202.3-201ENSMUST00000228532 310 ntBASIC1.8□□□□□ -2.12
Trbv1A0A0B4J1G7 Gm9762-201ENSMUST00000036976 444 ntBASIC1.8□□□□□ -2.12
Trbv1A0A0B4J1G7 Gm23727-201ENSMUST00000083352 164 ntBASIC1.8□□□□□ -2.12
Trbv1A0A0B4J1G7 Gm22353-201ENSMUST00000083918 136 ntBASIC1.8□□□□□ -2.12
Trbv1A0A0B4J1G7 Gm5670-201ENSMUST00000093546 372 ntBASIC1.8□□□□□ -2.12
Trbv1A0A0B4J1G7 Vmn1r87-201ENSMUST00000094827 888 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
Trbv1A0A0B4J1G7 Gm23741-201ENSMUST00000097237 171 ntBASIC1.8□□□□□ -2.12
Trbv1A0A0B4J1G7 Olfr847-202ENSMUST00000216839 2385 ntAPPRIS P1 TSL 3 BASIC1.8□□□□□ -2.12
Trbv1A0A0B4J1G7 Cd209e-201ENSMUST00000033888 1802 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
Trbv1A0A0B4J1G7 Gm25407-201ENSMUST00000104102 134 ntBASIC1.79□□□□□ -2.12
Trbv1A0A0B4J1G7 Rpl30-ps10-201ENSMUST00000117119 347 ntBASIC1.79□□□□□ -2.12
Trbv1A0A0B4J1G7 Gm14007-201ENSMUST00000118288 210 ntBASIC1.79□□□□□ -2.12
Trbv1A0A0B4J1G7 Gm12191-201ENSMUST00000118307 348 ntBASIC1.79□□□□□ -2.12
Trbv1A0A0B4J1G7 Gm12513-201ENSMUST00000118617 352 ntBASIC1.79□□□□□ -2.12
Trbv1A0A0B4J1G7 Gm9703-201ENSMUST00000119573 343 ntBASIC1.79□□□□□ -2.12
Retrieved 100 of 76,532 protein–RNA pairs in 86.5 ms