Protein–RNA interactions for Protein: A0A075B5Z4

Trav1, T cell receptor alpha variable 1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav1A0A075B5Z4 Igkv17-134-201ENSMUST00000168310 348 ntBASIC2.43□□□□□ -2.02
Trav1A0A075B5Z4 Gm23186-201ENSMUST00000180078 107 ntBASIC2.43□□□□□ -2.02
Trav1A0A075B5Z4 Gm20268-201ENSMUST00000187932 845 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
Trav1A0A075B5Z4 Gm19641-201ENSMUST00000188432 417 ntBASIC2.43□□□□□ -2.02
Trav1A0A075B5Z4 BE692007-203ENSMUST00000189306 362 ntTSL 3 BASIC2.43□□□□□ -2.02
Trav1A0A075B5Z4 Gm7858-201ENSMUST00000190177 622 ntBASIC2.43□□□□□ -2.02
Trav1A0A075B5Z4 Gm23128-202ENSMUST00000196578 133 ntBASIC2.43□□□□□ -2.02
Trav1A0A075B5Z4 Gm6135-201ENSMUST00000198726 372 ntTSL 2 BASIC2.43□□□□□ -2.02
Trav1A0A075B5Z4 Olfr848-ps1-201ENSMUST00000212241 930 ntBASIC2.43□□□□□ -2.02
Trav1A0A075B5Z4 Gm7692-201ENSMUST00000213534 409 ntBASIC2.43□□□□□ -2.02
Trav1A0A075B5Z4 Gm29809-201ENSMUST00000218423 493 ntBASIC2.43□□□□□ -2.02
Trav1A0A075B5Z4 AC157017.1-201ENSMUST00000220148 364 ntBASIC2.43□□□□□ -2.02
Trav1A0A075B5Z4 Gm46312-201ENSMUST00000220961 420 ntBASIC2.43□□□□□ -2.02
Trav1A0A075B5Z4 AC115289.1-201ENSMUST00000224915 522 ntBASIC2.43□□□□□ -2.02
Trav1A0A075B5Z4 AC129202.2-201ENSMUST00000225123 177 ntBASIC2.43□□□□□ -2.02
Trav1A0A075B5Z4 Gm10717-201ENSMUST00000075573 684 ntTSL 5 BASIC2.43□□□□□ -2.02
Trav1A0A075B5Z4 Gm25411-201ENSMUST00000083760 151 ntBASIC2.43□□□□□ -2.02
Trav1A0A075B5Z4 Gm4224-201ENSMUST00000211557 1594 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
Trav1A0A075B5Z4 Esp34-201ENSMUST00000173055 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC2.42□□□□□ -2.02
Trav1A0A075B5Z4 Esp34-202ENSMUST00000178654 1413 ntAPPRIS P2 TSL 1 (best) BASIC2.42□□□□□ -2.02
Trav1A0A075B5Z4 AC117199.1-201ENSMUST00000219940 3132 ntBASIC2.42□□□□□ -2.02
Trav1A0A075B5Z4 Olfr609-202ENSMUST00000216075 3429 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
Trav1A0A075B5Z4 Ranbp2-201ENSMUST00000003310 9608 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
Trav1A0A075B5Z4 Gm26147-201ENSMUST00000104479 114 ntBASIC2.42□□□□□ -2.02
Trav1A0A075B5Z4 Gm7123-201ENSMUST00000117647 213 ntBASIC2.42□□□□□ -2.02
Trav1A0A075B5Z4 Gm9043-201ENSMUST00000119677 314 ntBASIC2.42□□□□□ -2.02
Trav1A0A075B5Z4 Gm15807-201ENSMUST00000119880 1128 ntBASIC2.42□□□□□ -2.02
Trav1A0A075B5Z4 Gm12819-201ENSMUST00000122223 629 ntBASIC2.42□□□□□ -2.02
Trav1A0A075B5Z4 Rps15a-ps5-201ENSMUST00000132586 393 ntBASIC2.42□□□□□ -2.02
Trav1A0A075B5Z4 Hmgb1-rs16-201ENSMUST00000185927 613 ntBASIC2.42□□□□□ -2.02
Trav1A0A075B5Z4 Gm29232-201ENSMUST00000189100 297 ntTSL 5 BASIC2.42□□□□□ -2.02
Trav1A0A075B5Z4 Gm18982-201ENSMUST00000198118 529 ntBASIC2.42□□□□□ -2.02
Trav1A0A075B5Z4 Gm44073-201ENSMUST00000204173 429 ntTSL 3 BASIC2.42□□□□□ -2.02
Trav1A0A075B5Z4 Gm30784-201ENSMUST00000204491 794 ntTSL 2 BASIC2.42□□□□□ -2.02
Trav1A0A075B5Z4 Olfr1430-ps1-201ENSMUST00000207422 917 ntBASIC2.42□□□□□ -2.02
Trav1A0A075B5Z4 Olfr1114-ps1-201ENSMUST00000213896 456 ntBASIC2.42□□□□□ -2.02
Trav1A0A075B5Z4 AC115750.1-201ENSMUST00000220441 567 ntBASIC2.42□□□□□ -2.02
Trav1A0A075B5Z4 AC125223.1-203ENSMUST00000225304 498 ntBASIC2.42□□□□□ -2.02
Trav1A0A075B5Z4 Gm23614-201ENSMUST00000082598 107 ntBASIC2.42□□□□□ -2.02
Trav1A0A075B5Z4 Gm25853-201ENSMUST00000082793 132 ntBASIC2.42□□□□□ -2.02
Trav1A0A075B5Z4 Rny3-201ENSMUST00000083011 102 ntBASIC2.42□□□□□ -2.02
Trav1A0A075B5Z4 Slco6c1-202ENSMUST00000189547 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC2.42□□□□□ -2.02
Trav1A0A075B5Z4 Gm42524-201ENSMUST00000202881 2214 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
Trav1A0A075B5Z4 Olfr1093-202ENSMUST00000213354 2240 ntAPPRIS P1 TSL 3 BASIC2.42□□□□□ -2.02
Trav1A0A075B5Z4 Adgrg4-204ENSMUST00000153784 9329 ntAPPRIS P5 TSL 5 BASIC2.41□□□□□ -2.02
Trav1A0A075B5Z4 Olfr1450-203ENSMUST00000213925 3075 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
Trav1A0A075B5Z4 Gm20557-201ENSMUST00000192871 2794 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
Trav1A0A075B5Z4 Olfr786-202ENSMUST00000204529 2824 ntAPPRIS P1 TSL 3 BASIC2.41□□□□□ -2.02
Trav1A0A075B5Z4 Gm10486-201ENSMUST00000101647 924 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
Trav1A0A075B5Z4 Mir92-1-201ENSMUST00000102108 80 ntBASIC2.41□□□□□ -2.02
Trav1A0A075B5Z4 Ighv16-1-201ENSMUST00000103470 299 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
Trav1A0A075B5Z4 Gm13343-201ENSMUST00000116474 105 ntBASIC2.41□□□□□ -2.02
Trav1A0A075B5Z4 Rpl30-ps3-201ENSMUST00000117928 348 ntBASIC2.41□□□□□ -2.02
Trav1A0A075B5Z4 Gm11785-201ENSMUST00000120165 601 ntBASIC2.41□□□□□ -2.02
Trav1A0A075B5Z4 Gm14638-201ENSMUST00000121338 216 ntBASIC2.41□□□□□ -2.02
Trav1A0A075B5Z4 Gm14848-201ENSMUST00000121850 467 ntBASIC2.41□□□□□ -2.02
Trav1A0A075B5Z4 Gm25107-201ENSMUST00000122472 129 ntBASIC2.41□□□□□ -2.02
Trav1A0A075B5Z4 Gm16572-201ENSMUST00000160258 279 ntTSL 3 BASIC2.41□□□□□ -2.02
Trav1A0A075B5Z4 Gm8207-201ENSMUST00000171204 502 ntBASIC2.41□□□□□ -2.02
Trav1A0A075B5Z4 BC028528-205ENSMUST00000171519 447 ntAPPRIS P3 TSL 1 (best) BASIC2.41□□□□□ -2.02
Trav1A0A075B5Z4 Obox4-ps6-201ENSMUST00000176578 724 ntBASIC2.41□□□□□ -2.02
Trav1A0A075B5Z4 Gm26335-201ENSMUST00000178449 107 ntBASIC2.41□□□□□ -2.02
Trav1A0A075B5Z4 Gm25528-201ENSMUST00000180264 132 ntBASIC2.41□□□□□ -2.02
Trav1A0A075B5Z4 Gm24518-201ENSMUST00000180275 94 ntBASIC2.41□□□□□ -2.02
Trav1A0A075B5Z4 Gm27520-201ENSMUST00000184872 81 ntBASIC2.41□□□□□ -2.02
Trav1A0A075B5Z4 Sumo1-203ENSMUST00000185265 532 ntTSL 3 BASIC2.41□□□□□ -2.02
Trav1A0A075B5Z4 Gm29591-201ENSMUST00000188215 357 ntTSL 5 BASIC2.41□□□□□ -2.02
Trav1A0A075B5Z4 Gm28650-201ENSMUST00000188413 411 ntBASIC2.41□□□□□ -2.02
Trav1A0A075B5Z4 Gm28155-201ENSMUST00000191066 151 ntBASIC2.41□□□□□ -2.02
Trav1A0A075B5Z4 Gm19694-201ENSMUST00000192364 505 ntBASIC2.41□□□□□ -2.02
Trav1A0A075B5Z4 Gm37523-201ENSMUST00000194901 412 ntBASIC2.41□□□□□ -2.02
Trav1A0A075B5Z4 Trav14-1-201ENSMUST00000198297 399 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
Trav1A0A075B5Z4 Gm44041-201ENSMUST00000203678 396 ntBASIC2.41□□□□□ -2.02
Trav1A0A075B5Z4 Gm44266-201ENSMUST00000205235 500 ntBASIC2.41□□□□□ -2.02
Trav1A0A075B5Z4 Prl2c5-201ENSMUST00000021778 844 ntAPPRIS P3 TSL 1 (best) BASIC2.41□□□□□ -2.02
Trav1A0A075B5Z4 AC149586.1-201ENSMUST00000222647 645 ntTSL 3 BASIC2.41□□□□□ -2.02
Trav1A0A075B5Z4 Gm23093-201ENSMUST00000083450 102 ntBASIC2.41□□□□□ -2.02
Trav1A0A075B5Z4 Gm813-201ENSMUST00000099663 702 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
Trav1A0A075B5Z4 Pak3-205ENSMUST00000112868 8163 ntAPPRIS P3 TSL 5 BASIC2.41□□□□□ -2.02
Trav1A0A075B5Z4 Olfr1161-203ENSMUST00000217006 3647 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
Trav1A0A075B5Z4 Dpp10-201ENSMUST00000112603 4477 ntAPPRIS ALT2 TSL 5 BASIC2.41□□□□□ -2.02
Trav1A0A075B5Z4 Gm7145-201ENSMUST00000185381 1794 ntAPPRIS P1 TSL 3 BASIC2.41□□□□□ -2.02
Trav1A0A075B5Z4 Gm42659-201ENSMUST00000196955 1754 ntBASIC2.41□□□□□ -2.02
Trav1A0A075B5Z4 Olfr1314-202ENSMUST00000207976 2976 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.02
Trav1A0A075B5Z4 Olfr116-202ENSMUST00000216128 4477 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.02
Trav1A0A075B5Z4 Gm43326-201ENSMUST00000198459 1638 ntBASIC2.4□□□□□ -2.03
Trav1A0A075B5Z4 Olfr352-202ENSMUST00000217325 3337 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
Trav1A0A075B5Z4 Gm13510-201ENSMUST00000118659 429 ntBASIC2.4□□□□□ -2.03
Trav1A0A075B5Z4 Gm11512-201ENSMUST00000119669 663 ntBASIC2.4□□□□□ -2.03
Trav1A0A075B5Z4 Gm14530-201ENSMUST00000122391 333 ntBASIC2.4□□□□□ -2.03
Trav1A0A075B5Z4 n-R5s80-201ENSMUST00000122596 111 ntBASIC2.4□□□□□ -2.03
Trav1A0A075B5Z4 n-R5s216-201ENSMUST00000122755 112 ntBASIC2.4□□□□□ -2.03
Trav1A0A075B5Z4 Gm3669-202ENSMUST00000127852 397 ntTSL 3 BASIC2.4□□□□□ -2.03
Trav1A0A075B5Z4 Gm2101-201ENSMUST00000128191 397 ntTSL 3 BASIC2.4□□□□□ -2.03
Trav1A0A075B5Z4 Gm15669-201ENSMUST00000147834 526 ntTSL 3 BASIC2.4□□□□□ -2.03
Trav1A0A075B5Z4 Gm2165-205ENSMUST00000155337 397 ntTSL 3 BASIC2.4□□□□□ -2.03
Trav1A0A075B5Z4 Gm23600-201ENSMUST00000157260 71 ntBASIC2.4□□□□□ -2.03
Trav1A0A075B5Z4 Gm24905-201ENSMUST00000158129 104 ntBASIC2.4□□□□□ -2.03
Trav1A0A075B5Z4 Gm7568-203ENSMUST00000161626 415 ntTSL 3 BASIC2.4□□□□□ -2.03
Trav1A0A075B5Z4 Gm16232-201ENSMUST00000162856 167 ntBASIC2.4□□□□□ -2.03
Retrieved 100 of 76,532 protein–RNA pairs in 83.1 ms