Protein–RNA interactions for Protein: Q9R053

Scn11a, Sodium channel protein type 11 subunit alpha, mousemouse

Predictions only

Length 1,765 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn11aQ9R053 Gm11983-202ENSMUST00000184940 318 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
Scn11aQ9R053 Olfr729-201ENSMUST00000061020 972 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
Scn11aQ9R053 Gm14444-202ENSMUST00000109070 1281 ntAPPRIS P1 TSL 3 BASIC1.39□□□□□ -2.19
Scn11aQ9R053 Gm11192-201ENSMUST00000127017 151 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
Scn11aQ9R053 Gm16363-201ENSMUST00000132460 877 ntBASIC1.39□□□□□ -2.19
Scn11aQ9R053 Gm26741-201ENSMUST00000180473 87 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
Scn11aQ9R053 4930401A07Rik-201ENSMUST00000214657 746 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
Scn11aQ9R053 Mir22-201ENSMUST00000083595 95 ntBASIC1.39□□□□□ -2.19
Scn11aQ9R053 Vmn1r178-205ENSMUST00000227993 2518 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
Scn11aQ9R053 Gm34240-201ENSMUST00000192500 1936 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
Scn11aQ9R053 A630081D01Rik-201ENSMUST00000195842 1833 ntBASIC1.38□□□□□ -2.19
Scn11aQ9R053 Gm22658-201ENSMUST00000104196 155 ntBASIC1.38□□□□□ -2.19
Scn11aQ9R053 Esp8-201ENSMUST00000171813 901 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
Scn11aQ9R053 Gm25633-201ENSMUST00000178565 107 ntBASIC1.38□□□□□ -2.19
Scn11aQ9R053 Csn1s2b-204ENSMUST00000197301 627 ntAPPRIS ALT2 TSL 5 BASIC1.38□□□□□ -2.19
Scn11aQ9R053 Gm3724-201ENSMUST00000197957 349 ntBASIC1.38□□□□□ -2.19
Scn11aQ9R053 Gm18252-201ENSMUST00000214814 527 ntTSL 5 BASIC1.38□□□□□ -2.19
Scn11aQ9R053 AC151907.1-201ENSMUST00000228812 412 ntBASIC1.38□□□□□ -2.19
Scn11aQ9R053 Olfr1340-201ENSMUST00000094834 951 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
Scn11aQ9R053 Olfr183-202ENSMUST00000206303 1862 ntAPPRIS P1 TSL 3 BASIC1.37□□□□□ -2.19
Scn11aQ9R053 Gm14632-201ENSMUST00000101654 864 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
Scn11aQ9R053 Prl3c1-203ENSMUST00000178072 579 ntAPPRIS ALT2 TSL 5 BASIC1.37□□□□□ -2.19
Scn11aQ9R053 Rpl23a-ps8-201ENSMUST00000186144 463 ntBASIC1.37□□□□□ -2.19
Scn11aQ9R053 Prl2c5-201ENSMUST00000021778 844 ntAPPRIS P3 TSL 1 (best) BASIC1.37□□□□□ -2.19
Scn11aQ9R053 Ifnk-201ENSMUST00000058595 805 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
Scn11aQ9R053 Olfr807-201ENSMUST00000059038 997 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
Scn11aQ9R053 Gm10147-201ENSMUST00000075388 864 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
Scn11aQ9R053 Gm22980-201ENSMUST00000082608 70 ntBASIC1.37□□□□□ -2.19
Scn11aQ9R053 Vmn1r29-204ENSMUST00000228038 4520 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
Scn11aQ9R053 Gm42968-201ENSMUST00000198578 1372 ntBASIC1.37□□□□□ -2.19
Scn11aQ9R053 Gm14707-201ENSMUST00000152793 398 ntTSL 5 BASIC1.36□□□□□ -2.19
Scn11aQ9R053 Gm31230-201ENSMUST00000199725 785 ntBASIC1.36□□□□□ -2.19
Scn11aQ9R053 AC158521.1-201ENSMUST00000225295 660 ntBASIC1.36□□□□□ -2.19
Scn11aQ9R053 Mir873a-201ENSMUST00000104863 77 ntBASIC1.36□□□□□ -2.19
Scn11aQ9R053 Vmn2r-ps79-201ENSMUST00000174256 377 ntBASIC1.36□□□□□ -2.19
Scn11aQ9R053 Gm6060-201ENSMUST00000188671 251 ntBASIC1.36□□□□□ -2.19
Scn11aQ9R053 Gm23850-201ENSMUST00000083830 169 ntBASIC1.36□□□□□ -2.19
Scn11aQ9R053 Olfr1288-202ENSMUST00000214816 1326 ntAPPRIS P1 TSL 5 BASIC1.35□□□□□ -2.19
Scn11aQ9R053 Olfr868-201ENSMUST00000212767 4196 ntAPPRIS P1 TSL 3 BASIC1.35□□□□□ -2.19
Scn11aQ9R053 Olfr820-202ENSMUST00000214917 4701 ntAPPRIS P1 TSL 5 BASIC1.35□□□□□ -2.19
Scn11aQ9R053 Gm1980-201ENSMUST00000123131 2306 ntBASIC1.35□□□□□ -2.19
Scn11aQ9R053 Olfr385-202ENSMUST00000215689 1671 ntAPPRIS P1 TSL 5 BASIC1.35□□□□□ -2.19
Scn11aQ9R053 Gm6938-201ENSMUST00000123014 771 ntTSL 3 BASIC1.35□□□□□ -2.19
Scn11aQ9R053 Rpl23a-ps10-201ENSMUST00000185511 462 ntBASIC1.35□□□□□ -2.19
Scn11aQ9R053 CT009718.1-201ENSMUST00000220784 395 ntTSL 2 BASIC1.35□□□□□ -2.19
Scn11aQ9R053 1700019M22Rik-201ENSMUST00000073560 354 ntBASIC1.35□□□□□ -2.19
Scn11aQ9R053 Gm43484-201ENSMUST00000198333 5966 ntBASIC1.35□□□□□ -2.19
Scn11aQ9R053 Gm24579-201ENSMUST00000103964 144 ntBASIC1.34□□□□□ -2.19
Scn11aQ9R053 Gm13219-202ENSMUST00000152599 685 ntTSL 3 BASIC1.34□□□□□ -2.19
Scn11aQ9R053 Gm42454-201ENSMUST00000196805 1181 ntBASIC1.34□□□□□ -2.19
Scn11aQ9R053 Gm45791-201ENSMUST00000212908 352 ntBASIC1.34□□□□□ -2.19
Scn11aQ9R053 Gm7739-201ENSMUST00000221131 1560 ntBASIC1.34□□□□□ -2.19
Scn11aQ9R053 Gm15421-201ENSMUST00000051985 443 ntTSL 3 BASIC1.34□□□□□ -2.19
Scn11aQ9R053 Defb10-201ENSMUST00000054162 298 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
Scn11aQ9R053 Vmn1r75-207ENSMUST00000228646 4466 ntAPPRIS ALT2 BASIC1.34□□□□□ -2.2
Scn11aQ9R053 Snord13-201ENSMUST00000157627 104 ntBASIC1.34□□□□□ -2.2
Scn11aQ9R053 Vmn2r-ps55-201ENSMUST00000173834 240 ntBASIC1.34□□□□□ -2.2
Scn11aQ9R053 Vmn1r-ps146-201ENSMUST00000176131 525 ntBASIC1.34□□□□□ -2.2
Scn11aQ9R053 Gm26178-201ENSMUST00000177706 107 ntBASIC1.34□□□□□ -2.2
Scn11aQ9R053 Gm23151-201ENSMUST00000178061 107 ntBASIC1.34□□□□□ -2.2
Scn11aQ9R053 Gm21885-201ENSMUST00000178891 327 ntBASIC1.34□□□□□ -2.2
Scn11aQ9R053 Gm18982-201ENSMUST00000198118 529 ntBASIC1.34□□□□□ -2.2
Scn11aQ9R053 Gm19233-201ENSMUST00000219772 936 ntBASIC1.34□□□□□ -2.2
Scn11aQ9R053 AC129202.1-201ENSMUST00000224895 526 ntBASIC1.34□□□□□ -2.2
Scn11aQ9R053 Olfr1480-201ENSMUST00000072219 948 ntAPPRIS P1 BASIC1.34□□□□□ -2.2
Scn11aQ9R053 Gm43885-201ENSMUST00000204928 2542 ntBASIC1.33□□□□□ -2.2
Scn11aQ9R053 Olfr781-202ENSMUST00000204108 1304 ntAPPRIS P1 TSL 3 BASIC1.33□□□□□ -2.2
Scn11aQ9R053 Gm14069-201ENSMUST00000120815 229 ntBASIC1.33□□□□□ -2.2
Scn11aQ9R053 Gm26352-201ENSMUST00000158223 125 ntBASIC1.33□□□□□ -2.2
Scn11aQ9R053 Vmn1r-ps49-201ENSMUST00000177009 879 ntBASIC1.33□□□□□ -2.2
Scn11aQ9R053 Gm5309-201ENSMUST00000197416 677 ntBASIC1.33□□□□□ -2.2
Scn11aQ9R053 Gm43578-201ENSMUST00000201250 459 ntBASIC1.33□□□□□ -2.2
Scn11aQ9R053 Olfr793-ps1-201ENSMUST00000205161 895 ntBASIC1.33□□□□□ -2.2
Scn11aQ9R053 Olfr790-203ENSMUST00000215067 2659 ntAPPRIS P1 TSL 5 BASIC1.33□□□□□ -2.2
Scn11aQ9R053 Vmn1r67-202ENSMUST00000226237 2352 ntAPPRIS ALT2 BASIC1.33□□□□□ -2.2
Scn11aQ9R053 Gm12006-201ENSMUST00000120786 403 ntBASIC1.32□□□□□ -2.2
Scn11aQ9R053 Gm22158-201ENSMUST00000158411 126 ntBASIC1.32□□□□□ -2.2
Scn11aQ9R053 Gm24222-201ENSMUST00000158834 93 ntBASIC1.32□□□□□ -2.2
Scn11aQ9R053 Mir5124a-201ENSMUST00000175528 72 ntBASIC1.32□□□□□ -2.2
Scn11aQ9R053 Mir7241-201ENSMUST00000184532 64 ntBASIC1.32□□□□□ -2.2
Scn11aQ9R053 Gm19057-201ENSMUST00000194329 1197 ntBASIC1.32□□□□□ -2.2
Scn11aQ9R053 Olfr1461-201ENSMUST00000053772 939 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
Scn11aQ9R053 Olfr1098-202ENSMUST00000111574 2885 ntAPPRIS P1 TSL 3 BASIC1.32□□□□□ -2.2
Scn11aQ9R053 Gm6985-201ENSMUST00000121255 271 ntBASIC1.31□□□□□ -2.2
Scn11aQ9R053 Rpl39-ps-202ENSMUST00000146505 151 ntBASIC1.31□□□□□ -2.2
Scn11aQ9R053 U6.1-201ENSMUST00000157443 101 ntBASIC1.31□□□□□ -2.2
Scn11aQ9R053 Gm24551-201ENSMUST00000158645 92 ntBASIC1.31□□□□□ -2.2
Scn11aQ9R053 Gm22583-201ENSMUST00000178031 107 ntBASIC1.31□□□□□ -2.2
Scn11aQ9R053 Gm37987-201ENSMUST00000194999 825 ntBASIC1.31□□□□□ -2.2
Scn11aQ9R053 Gm44483-201ENSMUST00000197203 97 ntBASIC1.31□□□□□ -2.2
Scn11aQ9R053 Gm45365-201ENSMUST00000209489 256 ntBASIC1.31□□□□□ -2.2
Scn11aQ9R053 Gm11862-201ENSMUST00000119678 659 ntBASIC1.31□□□□□ -2.2
Scn11aQ9R053 Gm24594-201ENSMUST00000122502 99 ntBASIC1.31□□□□□ -2.2
Scn11aQ9R053 Gm24381-201ENSMUST00000122697 104 ntBASIC1.31□□□□□ -2.2
Scn11aQ9R053 Gm24878-201ENSMUST00000158782 104 ntBASIC1.31□□□□□ -2.2
Scn11aQ9R053 Vmn2r-ps80-201ENSMUST00000173697 914 ntBASIC1.31□□□□□ -2.2
Scn11aQ9R053 Gm42533-201ENSMUST00000196247 157 ntBASIC1.31□□□□□ -2.2
Scn11aQ9R053 Gm29865-201ENSMUST00000197726 451 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
Scn11aQ9R053 AC211878.4-201ENSMUST00000220970 262 ntBASIC1.31□□□□□ -2.2
Scn11aQ9R053 AC126554.1-201ENSMUST00000222161 271 ntBASIC1.31□□□□□ -2.2
Retrieved 100 of 76,532 protein–RNA pairs in 163 ms