Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 Gm9370-201ENSMUST00000222787 609 ntBASIC1.81□□□□□ -2.12
RTRAFQ9CQE8 Gnrh1-202ENSMUST00000223929 428 ntBASIC1.81□□□□□ -2.12
RTRAFQ9CQE8 4930469K13Rik-203ENSMUST00000224226 243 ntAPPRIS ALT2 BASIC1.81□□□□□ -2.12
RTRAFQ9CQE8 AC117202.3-201ENSMUST00000228532 310 ntBASIC1.81□□□□□ -2.12
RTRAFQ9CQE8 Mir30d-201ENSMUST00000083503 82 ntBASIC1.81□□□□□ -2.12
RTRAFQ9CQE8 Spink11-201ENSMUST00000097587 746 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
RTRAFQ9CQE8 Gm14440-201ENSMUST00000098998 192 ntTSL 5 BASIC1.81□□□□□ -2.12
RTRAFQ9CQE8 Olfr1487-203ENSMUST00000209005 2061 ntTSL 3 BASIC1.8□□□□□ -2.12
RTRAFQ9CQE8 Olfr1291-ps1-201ENSMUST00000121345 5403 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
RTRAFQ9CQE8 Trbj1-4-201ENSMUST00000103287 51 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
RTRAFQ9CQE8 Gm22494-201ENSMUST00000104495 128 ntBASIC1.8□□□□□ -2.12
RTRAFQ9CQE8 Gm12106-201ENSMUST00000116006 1200 ntBASIC1.8□□□□□ -2.12
RTRAFQ9CQE8 Gm22151-201ENSMUST00000116963 58 ntBASIC1.8□□□□□ -2.12
RTRAFQ9CQE8 Gm12814-201ENSMUST00000117091 846 ntBASIC1.8□□□□□ -2.12
RTRAFQ9CQE8 Gm14670-201ENSMUST00000117327 337 ntBASIC1.8□□□□□ -2.12
RTRAFQ9CQE8 Gm15312-201ENSMUST00000118827 271 ntBASIC1.8□□□□□ -2.12
RTRAFQ9CQE8 Mup-ps17-201ENSMUST00000120723 218 ntBASIC1.8□□□□□ -2.12
RTRAFQ9CQE8 Gm15309-201ENSMUST00000121644 240 ntBASIC1.8□□□□□ -2.12
RTRAFQ9CQE8 Zfp965-204ENSMUST00000143490 297 ntTSL 5 BASIC1.8□□□□□ -2.12
RTRAFQ9CQE8 Gm22517-201ENSMUST00000158265 136 ntBASIC1.8□□□□□ -2.12
RTRAFQ9CQE8 Gm22611-201ENSMUST00000158288 150 ntBASIC1.8□□□□□ -2.12
RTRAFQ9CQE8 Gm24770-201ENSMUST00000158505 92 ntBASIC1.8□□□□□ -2.12
RTRAFQ9CQE8 Gm23005-201ENSMUST00000158950 136 ntBASIC1.8□□□□□ -2.12
RTRAFQ9CQE8 Gm17521-201ENSMUST00000165345 468 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
RTRAFQ9CQE8 Gm9071-201ENSMUST00000165915 474 ntBASIC1.8□□□□□ -2.12
RTRAFQ9CQE8 Gm22584-201ENSMUST00000177935 92 ntBASIC1.8□□□□□ -2.12
RTRAFQ9CQE8 Gm28189-201ENSMUST00000190085 571 ntTSL 3 BASIC1.8□□□□□ -2.12
RTRAFQ9CQE8 Gm44050-201ENSMUST00000204263 527 ntBASIC1.8□□□□□ -2.12
RTRAFQ9CQE8 Gm43955-201ENSMUST00000204332 142 ntBASIC1.8□□□□□ -2.12
RTRAFQ9CQE8 Gm35386-201ENSMUST00000204603 629 ntTSL 3 BASIC1.8□□□□□ -2.12
RTRAFQ9CQE8 Gm44472-201ENSMUST00000204922 943 ntBASIC1.8□□□□□ -2.12
RTRAFQ9CQE8 Gm16351-202ENSMUST00000209660 337 ntTSL 5 BASIC1.8□□□□□ -2.12
RTRAFQ9CQE8 Gm39154-201ENSMUST00000210257 560 ntTSL 5 BASIC1.8□□□□□ -2.12
RTRAFQ9CQE8 Olfr908-201ENSMUST00000215139 932 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
RTRAFQ9CQE8 AC154271.1-201ENSMUST00000224780 383 ntBASIC1.8□□□□□ -2.12
RTRAFQ9CQE8 Zfp706-205ENSMUST00000228275 481 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
RTRAFQ9CQE8 2010106E10Rik-201ENSMUST00000026602 1257 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
RTRAFQ9CQE8 2610044O15Rik8-201ENSMUST00000079272 264 ntTSL 5 BASIC1.8□□□□□ -2.12
RTRAFQ9CQE8 Gm10025-201ENSMUST00000079568 372 ntBASIC1.8□□□□□ -2.12
RTRAFQ9CQE8 Olfr1206-202ENSMUST00000216950 3303 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
RTRAFQ9CQE8 Mir682-201ENSMUST00000102281 96 ntBASIC1.79□□□□□ -2.12
RTRAFQ9CQE8 Rps15a-ps6-201ENSMUST00000117476 393 ntBASIC1.79□□□□□ -2.12
RTRAFQ9CQE8 Gm14292-201ENSMUST00000118761 456 ntBASIC1.79□□□□□ -2.12
RTRAFQ9CQE8 Rpl23a-ps6-201ENSMUST00000119466 468 ntBASIC1.79□□□□□ -2.12
RTRAFQ9CQE8 Gm15671-201ENSMUST00000124160 576 ntTSL 5 BASIC1.79□□□□□ -2.12
RTRAFQ9CQE8 Zfp950-205ENSMUST00000148569 192 ntTSL 5 BASIC1.79□□□□□ -2.12
RTRAFQ9CQE8 4930401O12Rik-201ENSMUST00000153175 841 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
RTRAFQ9CQE8 Cep41-210ENSMUST00000169422 438 ntTSL 3 BASIC1.79□□□□□ -2.12
RTRAFQ9CQE8 Obox1-203ENSMUST00000172881 821 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
RTRAFQ9CQE8 Zfp950-206ENSMUST00000178819 171 ntBASIC1.79□□□□□ -2.12
RTRAFQ9CQE8 Gm27379-201ENSMUST00000183730 123 ntBASIC1.79□□□□□ -2.12
RTRAFQ9CQE8 Gm28283-201ENSMUST00000185509 178 ntBASIC1.79□□□□□ -2.12
RTRAFQ9CQE8 Gm28560-201ENSMUST00000186091 315 ntBASIC1.79□□□□□ -2.12
RTRAFQ9CQE8 Gm28334-201ENSMUST00000186653 315 ntBASIC1.79□□□□□ -2.12
RTRAFQ9CQE8 Gm28495-201ENSMUST00000188452 315 ntBASIC1.79□□□□□ -2.12
RTRAFQ9CQE8 Gm28232-201ENSMUST00000188683 315 ntBASIC1.79□□□□□ -2.12
RTRAFQ9CQE8 Gm28481-201ENSMUST00000189231 315 ntBASIC1.79□□□□□ -2.12
RTRAFQ9CQE8 Gm29059-201ENSMUST00000191534 315 ntBASIC1.79□□□□□ -2.12
RTRAFQ9CQE8 Gm37765-201ENSMUST00000192395 315 ntBASIC1.79□□□□□ -2.12
RTRAFQ9CQE8 Gm37237-201ENSMUST00000192893 315 ntBASIC1.79□□□□□ -2.12
RTRAFQ9CQE8 Gm36968-201ENSMUST00000193737 315 ntBASIC1.79□□□□□ -2.12
RTRAFQ9CQE8 Gm38290-201ENSMUST00000195238 315 ntBASIC1.79□□□□□ -2.12
RTRAFQ9CQE8 Gm37029-201ENSMUST00000195773 239 ntBASIC1.79□□□□□ -2.12
RTRAFQ9CQE8 Gm42947-201ENSMUST00000198230 675 ntTSL 2 BASIC1.79□□□□□ -2.12
RTRAFQ9CQE8 Fbxw15-203ENSMUST00000198397 927 ntAPPRIS ALT2 TSL 1 (best) BASIC1.79□□□□□ -2.12
RTRAFQ9CQE8 Zfp813-ps-202ENSMUST00000204773 618 ntTSL 5 BASIC1.79□□□□□ -2.12
RTRAFQ9CQE8 Gm44609-201ENSMUST00000207157 460 ntBASIC1.79□□□□□ -2.12
RTRAFQ9CQE8 Gm44961-201ENSMUST00000207450 196 ntBASIC1.79□□□□□ -2.12
RTRAFQ9CQE8 Gm45355-201ENSMUST00000211342 296 ntTSL 3 BASIC1.79□□□□□ -2.12
RTRAFQ9CQE8 Gm45791-201ENSMUST00000212908 352 ntBASIC1.79□□□□□ -2.12
RTRAFQ9CQE8 AL929265.1-201ENSMUST00000213427 125 ntBASIC1.79□□□□□ -2.12
RTRAFQ9CQE8 AC144783.2-201ENSMUST00000219089 195 ntBASIC1.79□□□□□ -2.12
RTRAFQ9CQE8 Gm32300-201ENSMUST00000221735 515 ntBASIC1.79□□□□□ -2.12
RTRAFQ9CQE8 AL590503.1-201ENSMUST00000222053 321 ntBASIC1.79□□□□□ -2.12
RTRAFQ9CQE8 CR974485.1-201ENSMUST00000222408 402 ntBASIC1.79□□□□□ -2.12
RTRAFQ9CQE8 CT010480.1-201ENSMUST00000223612 363 ntBASIC1.79□□□□□ -2.12
RTRAFQ9CQE8 Defb4-201ENSMUST00000081017 454 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
RTRAFQ9CQE8 Gm22247-201ENSMUST00000082476 131 ntBASIC1.79□□□□□ -2.12
RTRAFQ9CQE8 Gm22974-201ENSMUST00000083301 103 ntBASIC1.79□□□□□ -2.12
RTRAFQ9CQE8 Rpl31-ps1-201ENSMUST00000085128 378 ntBASIC1.79□□□□□ -2.12
RTRAFQ9CQE8 Prl7a1-202ENSMUST00000095924 928 ntAPPRIS ALT2 TSL 1 (best) BASIC1.79□□□□□ -2.12
RTRAFQ9CQE8 Olfr1013-202ENSMUST00000216397 4925 ntAPPRIS P1 TSL 2 BASIC1.78□□□□□ -2.12
RTRAFQ9CQE8 Traj39-201ENSMUST00000103703 63 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
RTRAFQ9CQE8 Gm15846-201ENSMUST00000116022 320 ntBASIC1.78□□□□□ -2.12
RTRAFQ9CQE8 Gm12272-201ENSMUST00000138136 333 ntTSL 5 BASIC1.78□□□□□ -2.12
RTRAFQ9CQE8 Gm12510-201ENSMUST00000152190 362 ntTSL 5 BASIC1.78□□□□□ -2.12
RTRAFQ9CQE8 Gm23137-201ENSMUST00000157559 107 ntBASIC1.78□□□□□ -2.12
RTRAFQ9CQE8 Gm17377-201ENSMUST00000165184 207 ntBASIC1.78□□□□□ -2.12
RTRAFQ9CQE8 Mir6408-201ENSMUST00000183643 91 ntBASIC1.78□□□□□ -2.12
RTRAFQ9CQE8 Scgb2b14-ps-201ENSMUST00000189424 336 ntBASIC1.78□□□□□ -2.12
RTRAFQ9CQE8 Gm38171-201ENSMUST00000195716 478 ntTSL 3 BASIC1.78□□□□□ -2.12
RTRAFQ9CQE8 Gtpbp4-ps7-201ENSMUST00000197059 297 ntBASIC1.78□□□□□ -2.12
RTRAFQ9CQE8 AC154296.1-201ENSMUST00000198150 67 ntBASIC1.78□□□□□ -2.12
RTRAFQ9CQE8 Gm43114-201ENSMUST00000198298 343 ntBASIC1.78□□□□□ -2.12
RTRAFQ9CQE8 Gm37797-201ENSMUST00000212114 815 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
RTRAFQ9CQE8 Gm22622-201ENSMUST00000082870 129 ntBASIC1.78□□□□□ -2.12
RTRAFQ9CQE8 Gm22578-201ENSMUST00000083730 107 ntBASIC1.78□□□□□ -2.12
RTRAFQ9CQE8 Gm14445-201ENSMUST00000117051 1484 ntBASIC1.77□□□□□ -2.13
RTRAFQ9CQE8 Gm7237-201ENSMUST00000148435 1401 ntTSL 5 BASIC1.77□□□□□ -2.13
RTRAFQ9CQE8 Gm14007-201ENSMUST00000118288 210 ntBASIC1.77□□□□□ -2.13
Retrieved 100 of 76,532 protein–RNA pairs in 87.3 ms