Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Gm26276-201ENSMUST00000157099 109 ntBASIC4.02□□□□□ -1.77
Nkx6-1Q99MA9 Gm23232-201ENSMUST00000157300 105 ntBASIC4.02□□□□□ -1.77
Nkx6-1Q99MA9 Gm26347-201ENSMUST00000157526 131 ntBASIC4.02□□□□□ -1.77
Nkx6-1Q99MA9 Gm10357-201ENSMUST00000159886 264 ntBASIC4.02□□□□□ -1.77
Nkx6-1Q99MA9 Gm26983-201ENSMUST00000182051 388 ntBASIC4.02□□□□□ -1.77
Nkx6-1Q99MA9 Gm36831-201ENSMUST00000196485 631 ntTSL 2 BASIC4.02□□□□□ -1.77
Nkx6-1Q99MA9 Gm43250-201ENSMUST00000196536 273 ntBASIC4.02□□□□□ -1.77
Nkx6-1Q99MA9 Calml4-204ENSMUST00000214633 394 ntTSL 3 BASIC4.02□□□□□ -1.77
Nkx6-1Q99MA9 Gm29774-201ENSMUST00000219270 436 ntBASIC4.02□□□□□ -1.77
Nkx6-1Q99MA9 4930567K20Rik-204ENSMUST00000220270 445 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Nkx6-1Q99MA9 1700015C15Rik-201ENSMUST00000221465 374 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Nkx6-1Q99MA9 Ccl5-201ENSMUST00000035938 532 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Nkx6-1Q99MA9 Olfr44-202ENSMUST00000215065 3578 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
Nkx6-1Q99MA9 Steap2-204ENSMUST00000115426 10408 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Nkx6-1Q99MA9 Gm45137-201ENSMUST00000208652 4415 ntBASIC4.02□□□□□ -1.77
Nkx6-1Q99MA9 Gm17067-201ENSMUST00000166837 3673 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Nkx6-1Q99MA9 Olfr107-205ENSMUST00000216844 4021 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Nkx6-1Q99MA9 Olfr613-201ENSMUST00000106888 5139 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
Nkx6-1Q99MA9 Gm44435-201ENSMUST00000204379 4119 ntBASIC4.01□□□□□ -1.77
Nkx6-1Q99MA9 Vmn2r26-201ENSMUST00000032238 2568 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Nkx6-1Q99MA9 Gm26500-201ENSMUST00000101867 106 ntBASIC4.01□□□□□ -1.77
Nkx6-1Q99MA9 Catsper4-202ENSMUST00000105878 632 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Nkx6-1Q99MA9 Gm12760-201ENSMUST00000117861 482 ntBASIC4.01□□□□□ -1.77
Nkx6-1Q99MA9 Gm15002-201ENSMUST00000118406 452 ntBASIC4.01□□□□□ -1.77
Nkx6-1Q99MA9 Gm14541-201ENSMUST00000118985 157 ntBASIC4.01□□□□□ -1.77
Nkx6-1Q99MA9 Gm15986-201ENSMUST00000122153 400 ntBASIC4.01□□□□□ -1.77
Nkx6-1Q99MA9 Gm8200-201ENSMUST00000122390 222 ntBASIC4.01□□□□□ -1.77
Nkx6-1Q99MA9 n-R5s216-201ENSMUST00000122755 112 ntBASIC4.01□□□□□ -1.77
Nkx6-1Q99MA9 Gm25384-201ENSMUST00000157807 105 ntBASIC4.01□□□□□ -1.77
Nkx6-1Q99MA9 Gm25162-201ENSMUST00000158906 159 ntBASIC4.01□□□□□ -1.77
Nkx6-1Q99MA9 Slco1a4-203ENSMUST00000165990 3823 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Nkx6-1Q99MA9 Gm22859-201ENSMUST00000174978 122 ntBASIC4.01□□□□□ -1.77
Nkx6-1Q99MA9 Mir6336-201ENSMUST00000183581 130 ntBASIC4.01□□□□□ -1.77
Nkx6-1Q99MA9 Gm27899-201ENSMUST00000184715 64 ntBASIC4.01□□□□□ -1.77
Nkx6-1Q99MA9 Gm29408-201ENSMUST00000187536 216 ntBASIC4.01□□□□□ -1.77
Nkx6-1Q99MA9 Gm29140-201ENSMUST00000190187 476 ntBASIC4.01□□□□□ -1.77
Nkx6-1Q99MA9 Gm29334-201ENSMUST00000190334 357 ntBASIC4.01□□□□□ -1.77
Nkx6-1Q99MA9 Mir3535-201ENSMUST00000197651 147 ntBASIC4.01□□□□□ -1.77
Nkx6-1Q99MA9 Olfr542-ps1-201ENSMUST00000211706 831 ntBASIC4.01□□□□□ -1.77
Nkx6-1Q99MA9 Gm45859-201ENSMUST00000212794 214 ntBASIC4.01□□□□□ -1.77
Nkx6-1Q99MA9 AC132344.1-201ENSMUST00000221289 376 ntTSL 3 BASIC4.01□□□□□ -1.77
Nkx6-1Q99MA9 AC159231.1-201ENSMUST00000225365 226 ntBASIC4.01□□□□□ -1.77
Nkx6-1Q99MA9 Gm22685-201ENSMUST00000082848 106 ntBASIC4.01□□□□□ -1.77
Nkx6-1Q99MA9 Olfr1090-201ENSMUST00000099875 942 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
Nkx6-1Q99MA9 Gpr21-201ENSMUST00000065441 3619 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Nkx6-1Q99MA9 Olfr1493-ps1-201ENSMUST00000207208 1777 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Nkx6-1Q99MA9 Vmn1r216-203ENSMUST00000228389 10213 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
Nkx6-1Q99MA9 Lrp1b-201ENSMUST00000052550 16294 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Nkx6-1Q99MA9 Slfn8-201ENSMUST00000038141 4011 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Nkx6-1Q99MA9 Kctd12b-202ENSMUST00000112572 4851 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Nkx6-1Q99MA9 Stk-ps2-201ENSMUST00000051224 4667 ntTSL 2 BASIC4□□□□□ -1.77
Nkx6-1Q99MA9 Vmn2r32-201ENSMUST00000094866 3513 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Nkx6-1Q99MA9 Olfr1280-203ENSMUST00000219291 6883 ntAPPRIS P1 TSL 3 BASIC4□□□□□ -1.77
Nkx6-1Q99MA9 Olfr826-203ENSMUST00000216661 2858 ntAPPRIS P1 TSL 3 BASIC4□□□□□ -1.77
Nkx6-1Q99MA9 Cast-208ENSMUST00000223033 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
Nkx6-1Q99MA9 Igkv12-98-201ENSMUST00000103327 344 ntAPPRIS ALT2 BASIC4□□□□□ -1.77
Nkx6-1Q99MA9 Gm25764-201ENSMUST00000104092 134 ntBASIC4□□□□□ -1.77
Nkx6-1Q99MA9 Gm15553-201ENSMUST00000118757 430 ntBASIC4□□□□□ -1.77
Nkx6-1Q99MA9 Gm8840-201ENSMUST00000122454 386 ntBASIC4□□□□□ -1.77
Nkx6-1Q99MA9 Gm15537-201ENSMUST00000126677 485 ntTSL 2 BASIC4□□□□□ -1.77
Nkx6-1Q99MA9 Gm22654-201ENSMUST00000157874 105 ntBASIC4□□□□□ -1.77
Nkx6-1Q99MA9 Gm17186-201ENSMUST00000171742 456 ntBASIC4□□□□□ -1.77
Nkx6-1Q99MA9 Vmn2r-ps132-201ENSMUST00000176738 651 ntBASIC4□□□□□ -1.77
Nkx6-1Q99MA9 Gm22308-201ENSMUST00000177609 107 ntBASIC4□□□□□ -1.77
Nkx6-1Q99MA9 Gm23860-201ENSMUST00000179446 132 ntBASIC4□□□□□ -1.77
Nkx6-1Q99MA9 Trdv1-202ENSMUST00000187163 334 ntAPPRIS ALT2 BASIC4□□□□□ -1.77
Nkx6-1Q99MA9 Sprr2h-202ENSMUST00000191886 297 ntTSL 1 (best) BASIC4□□□□□ -1.77
Nkx6-1Q99MA9 Ighv12-2-201ENSMUST00000191949 362 ntBASIC4□□□□□ -1.77
Nkx6-1Q99MA9 Gm37763-201ENSMUST00000193445 120 ntBASIC4□□□□□ -1.77
Nkx6-1Q99MA9 Olfr1304-ps1-201ENSMUST00000208032 189 ntBASIC4□□□□□ -1.77
Nkx6-1Q99MA9 Gm44543-201ENSMUST00000209136 396 ntBASIC4□□□□□ -1.77
Nkx6-1Q99MA9 AC154328.1-201ENSMUST00000225875 307 ntBASIC4□□□□□ -1.77
Nkx6-1Q99MA9 AC113031.4-201ENSMUST00000228381 514 ntBASIC4□□□□□ -1.77
Nkx6-1Q99MA9 Rps17-201ENSMUST00000080813 494 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Nkx6-1Q99MA9 Gm22997-201ENSMUST00000082845 107 ntBASIC4□□□□□ -1.77
Nkx6-1Q99MA9 Gm23454-201ENSMUST00000083332 133 ntBASIC4□□□□□ -1.77
Nkx6-1Q99MA9 Mir133a-2-201ENSMUST00000083526 104 ntBASIC4□□□□□ -1.77
Nkx6-1Q99MA9 Olfr1496-202ENSMUST00000209137 2394 ntAPPRIS ALT1 TSL 5 BASIC4□□□□□ -1.77
Nkx6-1Q99MA9 Vmn1r43-205ENSMUST00000228709 12646 ntAPPRIS P1 BASIC4□□□□□ -1.77
Nkx6-1Q99MA9 Gm37397-201ENSMUST00000194579 2842 ntBASIC4□□□□□ -1.77
Nkx6-1Q99MA9 Lrrc19-201ENSMUST00000053419 2780 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Nkx6-1Q99MA9 Vmn1r81-205ENSMUST00000228764 13763 ntAPPRIS P2 BASIC4□□□□□ -1.77
Nkx6-1Q99MA9 Skint3-202ENSMUST00000170945 3843 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
Nkx6-1Q99MA9 Gm5596-201ENSMUST00000207988 2421 ntBASIC4□□□□□ -1.77
Nkx6-1Q99MA9 Trim30a-201ENSMUST00000076922 3771 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Nkx6-1Q99MA9 Olfr1196-202ENSMUST00000216928 4270 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Nkx6-1Q99MA9 Olfr128-202ENSMUST00000216440 3644 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Nkx6-1Q99MA9 AC153365.1-201ENSMUST00000219016 2031 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Nkx6-1Q99MA9 Nlrp4f-204ENSMUST00000221659 3551 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Nkx6-1Q99MA9 Gm4631-202ENSMUST00000121393 4402 ntAPPRIS P1 TSL 2 BASIC3.99□□□□□ -1.77
Nkx6-1Q99MA9 Olfr1243-202ENSMUST00000144885 3148 ntAPPRIS P1 TSL 3 BASIC3.99□□□□□ -1.77
Nkx6-1Q99MA9 Gm24127-201ENSMUST00000104110 130 ntBASIC3.99□□□□□ -1.77
Nkx6-1Q99MA9 Gm26418-201ENSMUST00000104275 137 ntBASIC3.99□□□□□ -1.77
Nkx6-1Q99MA9 Gm15613-201ENSMUST00000118396 326 ntBASIC3.99□□□□□ -1.77
Nkx6-1Q99MA9 Rps13-ps8-201ENSMUST00000118906 401 ntBASIC3.99□□□□□ -1.77
Nkx6-1Q99MA9 Gm11572-201ENSMUST00000119164 120 ntBASIC3.99□□□□□ -1.77
Nkx6-1Q99MA9 Gm12897-201ENSMUST00000120341 250 ntBASIC3.99□□□□□ -1.77
Nkx6-1Q99MA9 Chrna1os-201ENSMUST00000125413 680 ntTSL 3 BASIC3.99□□□□□ -1.77
Nkx6-1Q99MA9 Gm11958-201ENSMUST00000127224 253 ntTSL 5 BASIC3.99□□□□□ -1.77
Nkx6-1Q99MA9 Gm23496-201ENSMUST00000157741 248 ntBASIC3.99□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 92.4 ms