Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Gm23496-201ENSMUST00000157741 248 ntBASIC4.57□□□□□ -1.68
Clp1Q99LI9 Gm24959-201ENSMUST00000157924 146 ntBASIC4.57□□□□□ -1.68
Clp1Q99LI9 Gm26036-201ENSMUST00000158149 144 ntBASIC4.57□□□□□ -1.68
Clp1Q99LI9 Ifi206-202ENSMUST00000169797 429 ntTSL 5 BASIC4.57□□□□□ -1.68
Clp1Q99LI9 Gm20660-201ENSMUST00000177515 289 ntBASIC4.57□□□□□ -1.68
Clp1Q99LI9 Gm23215-201ENSMUST00000178153 121 ntBASIC4.57□□□□□ -1.68
Clp1Q99LI9 Dnajc5g-202ENSMUST00000201740 581 ntAPPRIS ALT2 TSL 3 BASIC4.57□□□□□ -1.68
Clp1Q99LI9 AC150560.2-201ENSMUST00000227208 171 ntBASIC4.57□□□□□ -1.68
Clp1Q99LI9 AC164100.1-201ENSMUST00000227214 508 ntBASIC4.57□□□□□ -1.68
Clp1Q99LI9 Gm25078-201ENSMUST00000082530 107 ntBASIC4.57□□□□□ -1.68
Clp1Q99LI9 Mir323-201ENSMUST00000083683 86 ntBASIC4.57□□□□□ -1.68
Clp1Q99LI9 Dmd-201ENSMUST00000113991 4438 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Clp1Q99LI9 Gpr141-201ENSMUST00000065335 3433 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Clp1Q99LI9 Themis-202ENSMUST00000060409 2278 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
Clp1Q99LI9 Cul4b-203ENSMUST00000115118 3344 ntAPPRIS P2 TSL 1 (best) BASIC4.57□□□□□ -1.68
Clp1Q99LI9 AC165106.3-201ENSMUST00000228191 3843 ntBASIC4.57□□□□□ -1.68
Clp1Q99LI9 Olfr1289-201ENSMUST00000120021 1643 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
Clp1Q99LI9 Olfr1354-203ENSMUST00000217073 3792 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
Clp1Q99LI9 Hnrnpr-207ENSMUST00000148843 21452 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Clp1Q99LI9 Olfr397-202ENSMUST00000213134 4048 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Clp1Q99LI9 Gm38240-201ENSMUST00000195110 2487 ntBASIC4.56□□□□□ -1.68
Clp1Q99LI9 Gm11782-201ENSMUST00000131675 2804 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Clp1Q99LI9 Gm37412-201ENSMUST00000194866 4321 ntBASIC4.56□□□□□ -1.68
Clp1Q99LI9 Gm23319-201ENSMUST00000104467 131 ntBASIC4.56□□□□□ -1.68
Clp1Q99LI9 Tfpi-205ENSMUST00000111717 2962 ntTSL 5 BASIC4.56□□□□□ -1.68
Clp1Q99LI9 Rpl38-ps2-201ENSMUST00000117356 213 ntBASIC4.56□□□□□ -1.68
Clp1Q99LI9 Gm8129-201ENSMUST00000118230 213 ntBASIC4.56□□□□□ -1.68
Clp1Q99LI9 Gm14593-201ENSMUST00000119948 294 ntBASIC4.56□□□□□ -1.68
Clp1Q99LI9 Gm22792-201ENSMUST00000157225 133 ntBASIC4.56□□□□□ -1.68
Clp1Q99LI9 Gm22433-201ENSMUST00000158550 142 ntBASIC4.56□□□□□ -1.68
Clp1Q99LI9 Gm27699-201ENSMUST00000183553 180 ntBASIC4.56□□□□□ -1.68
Clp1Q99LI9 Mir6336-201ENSMUST00000183581 130 ntBASIC4.56□□□□□ -1.68
Clp1Q99LI9 Gm1833-201ENSMUST00000191608 682 ntBASIC4.56□□□□□ -1.68
Clp1Q99LI9 Igkv9-128-201ENSMUST00000196602 353 ntBASIC4.56□□□□□ -1.68
Clp1Q99LI9 Gm8820-201ENSMUST00000204077 571 ntBASIC4.56□□□□□ -1.68
Clp1Q99LI9 AC145736.2-201ENSMUST00000216305 365 ntBASIC4.56□□□□□ -1.68
Clp1Q99LI9 AC160550.3-201ENSMUST00000226818 400 ntBASIC4.56□□□□□ -1.68
Clp1Q99LI9 Kcnj1-201ENSMUST00000047334 2987 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Clp1Q99LI9 Gm5899-201ENSMUST00000071770 270 ntBASIC4.56□□□□□ -1.68
Clp1Q99LI9 Gprc6a-201ENSMUST00000020062 2856 ntAPPRIS P2 TSL 1 (best) BASIC4.56□□□□□ -1.68
Clp1Q99LI9 Vmn1r169-204ENSMUST00000227932 2745 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
Clp1Q99LI9 Adgre4-201ENSMUST00000025004 3491 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Clp1Q99LI9 Gm15319-201ENSMUST00000084046 2522 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Clp1Q99LI9 4930467E23Rik-201ENSMUST00000098909 2514 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Clp1Q99LI9 Olfr1178-202ENSMUST00000214040 6480 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Clp1Q99LI9 Svet1-201ENSMUST00000209370 3940 ntBASIC4.55□□□□□ -1.68
Clp1Q99LI9 Nebl-207ENSMUST00000132418 1734 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Clp1Q99LI9 Olfr1058-202ENSMUST00000213998 1710 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Clp1Q99LI9 Olfr1129-202ENSMUST00000213315 2255 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
Clp1Q99LI9 Cylc1-201ENSMUST00000101282 1923 ntAPPRIS P2 TSL 1 (best) BASIC4.55□□□□□ -1.68
Clp1Q99LI9 Gm10552-201ENSMUST00000113396 372 ntBASIC4.55□□□□□ -1.68
Clp1Q99LI9 Gm24505-201ENSMUST00000157682 126 ntBASIC4.55□□□□□ -1.68
Clp1Q99LI9 Gm24997-201ENSMUST00000157910 105 ntBASIC4.55□□□□□ -1.68
Clp1Q99LI9 Gm23545-201ENSMUST00000158205 104 ntBASIC4.55□□□□□ -1.68
Clp1Q99LI9 Gm26028-201ENSMUST00000158660 294 ntBASIC4.55□□□□□ -1.68
Clp1Q99LI9 Gm24666-201ENSMUST00000158937 167 ntBASIC4.55□□□□□ -1.68
Clp1Q99LI9 Ear-ps4-201ENSMUST00000166834 450 ntBASIC4.55□□□□□ -1.68
Clp1Q99LI9 Gm22259-201ENSMUST00000178926 107 ntBASIC4.55□□□□□ -1.68
Clp1Q99LI9 Nutf2-ps2-201ENSMUST00000179225 384 ntBASIC4.55□□□□□ -1.68
Clp1Q99LI9 Mir6996-201ENSMUST00000183922 61 ntBASIC4.55□□□□□ -1.68
Clp1Q99LI9 Gm28000-201ENSMUST00000184380 85 ntBASIC4.55□□□□□ -1.68
Clp1Q99LI9 Gm27308-201ENSMUST00000184807 233 ntBASIC4.55□□□□□ -1.68
Clp1Q99LI9 Gm43814-201ENSMUST00000197851 413 ntBASIC4.55□□□□□ -1.68
Clp1Q99LI9 Igkv2-95-1-201ENSMUST00000200279 272 ntBASIC4.55□□□□□ -1.68
Clp1Q99LI9 Gm44389-201ENSMUST00000203795 182 ntBASIC4.55□□□□□ -1.68
Clp1Q99LI9 AC123803.1-201ENSMUST00000216093 189 ntBASIC4.55□□□□□ -1.68
Clp1Q99LI9 AC123533.1-201ENSMUST00000227782 446 ntBASIC4.55□□□□□ -1.68
Clp1Q99LI9 Olfr1317-201ENSMUST00000060098 951 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Clp1Q99LI9 mt-Atp8-201ENSMUST00000082407 204 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Clp1Q99LI9 Gm25134-201ENSMUST00000082646 160 ntBASIC4.55□□□□□ -1.68
Clp1Q99LI9 Dnah3-201ENSMUST00000046993 12252 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
Clp1Q99LI9 Fbxl17-204ENSMUST00000112840 3667 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Clp1Q99LI9 Fnd3c2-201ENSMUST00000091282 3662 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Clp1Q99LI9 Gm37742-201ENSMUST00000193263 3979 ntBASIC4.55□□□□□ -1.68
Clp1Q99LI9 Cacnb4-202ENSMUST00000102760 7872 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Clp1Q99LI9 Vmn1r58-201ENSMUST00000108569 10140 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Clp1Q99LI9 Akap6-201ENSMUST00000095737 14847 ntAPPRIS P2 TSL 1 (best) BASIC4.55□□□□□ -1.68
Clp1Q99LI9 Gm42910-201ENSMUST00000198917 2921 ntBASIC4.55□□□□□ -1.68
Clp1Q99LI9 Ccnb3-202ENSMUST00000115752 4554 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Clp1Q99LI9 Gm6710-202ENSMUST00000109012 1665 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Clp1Q99LI9 Gm14391-206ENSMUST00000165892 1665 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Clp1Q99LI9 Cnot6l-210ENSMUST00000155901 8564 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
Clp1Q99LI9 Trim30d-202ENSMUST00000071069 3282 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Clp1Q99LI9 Gm37899-201ENSMUST00000193116 8717 ntBASIC4.54□□□□□ -1.68
Clp1Q99LI9 Vmn1r72-202ENSMUST00000209638 6501 ntAPPRIS P1 TSL 3 BASIC4.54□□□□□ -1.68
Clp1Q99LI9 Zfp131-202ENSMUST00000178271 2966 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
Clp1Q99LI9 Jrkl-201ENSMUST00000110582 3223 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Clp1Q99LI9 Olfr194-203ENSMUST00000216519 3705 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Clp1Q99LI9 Gm10033-201ENSMUST00000072427 1813 ntBASIC4.54□□□□□ -1.68
Clp1Q99LI9 Gm14282-201ENSMUST00000119484 240 ntBASIC4.54□□□□□ -1.68
Clp1Q99LI9 Gm6071-201ENSMUST00000119561 440 ntBASIC4.54□□□□□ -1.68
Clp1Q99LI9 Gm10059-201ENSMUST00000131139 171 ntBASIC4.54□□□□□ -1.68
Clp1Q99LI9 Gm24850-201ENSMUST00000158029 119 ntBASIC4.54□□□□□ -1.68
Clp1Q99LI9 Gm16303-201ENSMUST00000161498 390 ntBASIC4.54□□□□□ -1.68
Clp1Q99LI9 Mir1251-201ENSMUST00000175486 84 ntBASIC4.54□□□□□ -1.68
Clp1Q99LI9 AV026068-203ENSMUST00000185946 668 ntTSL 3 BASIC4.54□□□□□ -1.68
Clp1Q99LI9 Gm43304-201ENSMUST00000196803 326 ntBASIC4.54□□□□□ -1.68
Clp1Q99LI9 Gm18921-201ENSMUST00000221798 366 ntBASIC4.54□□□□□ -1.68
Clp1Q99LI9 Gm24457-201ENSMUST00000083196 105 ntBASIC4.54□□□□□ -1.68
Clp1Q99LI9 Gm22169-201ENSMUST00000083229 107 ntBASIC4.54□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 77.7 ms