Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 CYP2C8-213ENST00000628935 924 ntTSL 5 BASIC7.64□□□□□ -1.19
CDK5RAP3Q96JB5 AC087565.2-201ENST00000637695 952 ntTSL 5 BASIC7.64□□□□□ -1.19
CDK5RAP3Q96JB5 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC7.64□□□□□ -1.19
CDK5RAP3Q96JB5 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
CDK5RAP3Q96JB5 CLCA3P-203ENST00000490028 2781 ntBASIC7.64□□□□□ -1.19
CDK5RAP3Q96JB5 MROH3P-201ENST00000435735 2676 ntBASIC7.64□□□□□ -1.19
CDK5RAP3Q96JB5 AC019270.1-201ENST00000523495 3488 ntTSL 5 BASIC7.64□□□□□ -1.19
CDK5RAP3Q96JB5 GABRA6-207ENST00000523217 2393 ntTSL 5 BASIC7.63□□□□□ -1.19
CDK5RAP3Q96JB5 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
CDK5RAP3Q96JB5 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC7.63□□□□□ -1.19
CDK5RAP3Q96JB5 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
CDK5RAP3Q96JB5 CREM-216ENST00000429130 1476 ntTSL 5 BASIC7.63□□□□□ -1.19
CDK5RAP3Q96JB5 CEACAM20-205ENST00000620096 1494 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
CDK5RAP3Q96JB5 CEP97-206ENST00000494050 2870 ntAPPRIS ALT2 TSL 2 BASIC7.63□□□□□ -1.19
CDK5RAP3Q96JB5 IMPG1-201ENST00000369950 3558 ntAPPRIS P3 TSL 1 (best) BASIC7.63□□□□□ -1.19
CDK5RAP3Q96JB5 MAPK10-270ENST00000641102 3538 ntBASIC7.63□□□□□ -1.19
CDK5RAP3Q96JB5 IL1RAP-212ENST00000443369 2760 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
CDK5RAP3Q96JB5 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
CDK5RAP3Q96JB5 AC122713.2-201ENST00000624942 3335 ntBASIC7.63□□□□□ -1.19
CDK5RAP3Q96JB5 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
CDK5RAP3Q96JB5 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
CDK5RAP3Q96JB5 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
CDK5RAP3Q96JB5 RPL7A-202ENST00000323345 891 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
CDK5RAP3Q96JB5 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC7.63□□□□□ -1.19
CDK5RAP3Q96JB5 AC008171.1-201ENST00000395058 200 ntBASIC7.63□□□□□ -1.19
CDK5RAP3Q96JB5 AL136116.2-201ENST00000404020 785 ntBASIC7.63□□□□□ -1.19
CDK5RAP3Q96JB5 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC7.63□□□□□ -1.19
CDK5RAP3Q96JB5 AC118754.1-201ENST00000416958 370 ntTSL 3 BASIC7.63□□□□□ -1.19
CDK5RAP3Q96JB5 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC7.63□□□□□ -1.19
CDK5RAP3Q96JB5 YWHAZP5-201ENST00000419975 730 ntBASIC7.63□□□□□ -1.19
CDK5RAP3Q96JB5 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
CDK5RAP3Q96JB5 LINC00433-201ENST00000424165 888 ntTSL 2 BASIC7.63□□□□□ -1.19
CDK5RAP3Q96JB5 CHCHD4P5-201ENST00000436684 427 ntBASIC7.63□□□□□ -1.19
CDK5RAP3Q96JB5 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC7.63□□□□□ -1.19
CDK5RAP3Q96JB5 AC003035.2-201ENST00000448948 696 ntTSL 3 BASIC7.63□□□□□ -1.19
CDK5RAP3Q96JB5 AL162427.1-201ENST00000450399 439 ntTSL 5 BASIC7.63□□□□□ -1.19
CDK5RAP3Q96JB5 AC016822.1-201ENST00000457975 439 ntTSL 3 BASIC7.63□□□□□ -1.19
CDK5RAP3Q96JB5 AC090589.1-201ENST00000473109 362 ntBASIC7.63□□□□□ -1.19
CDK5RAP3Q96JB5 CFI-204ENST00000510800 667 ntTSL 2 BASIC7.63□□□□□ -1.19
CDK5RAP3Q96JB5 AC097103.2-205ENST00000515247 567 ntTSL 4 BASIC7.63□□□□□ -1.19
CDK5RAP3Q96JB5 AP005902.2-201ENST00000518393 307 ntBASIC7.63□□□□□ -1.19
CDK5RAP3Q96JB5 AC005833.3-202ENST00000544741 770 ntAPPRIS P1 TSL 3 BASIC7.63□□□□□ -1.19
CDK5RAP3Q96JB5 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
CDK5RAP3Q96JB5 NQO1-205ENST00000561500 891 ntTSL 3 BASIC7.63□□□□□ -1.19
CDK5RAP3Q96JB5 AC090774.2-201ENST00000584708 322 ntBASIC7.63□□□□□ -1.19
CDK5RAP3Q96JB5 MIR7515HG-250ENST00000592565 856 ntTSL 5 BASIC7.63□□□□□ -1.19
CDK5RAP3Q96JB5 ZNF431-203ENST00000594425 610 ntTSL 2 BASIC7.63□□□□□ -1.19
CDK5RAP3Q96JB5 ZNF677-211ENST00000601828 719 ntTSL 2 BASIC7.63□□□□□ -1.19
CDK5RAP3Q96JB5 GMCL1P2-201ENST00000605230 823 ntBASIC7.63□□□□□ -1.19
CDK5RAP3Q96JB5 Metazoa_SRP.195-201ENST00000612667 287 ntBASIC7.63□□□□□ -1.19
CDK5RAP3Q96JB5 AC243919.1-201ENST00000613086 785 ntTSL 5 BASIC7.63□□□□□ -1.19
CDK5RAP3Q96JB5 Six3os1_4.1-201ENST00000615706 324 ntBASIC7.63□□□□□ -1.19
CDK5RAP3Q96JB5 AC073592.7-201ENST00000623659 507 ntBASIC7.63□□□□□ -1.19
CDK5RAP3Q96JB5 AC063952.1-203ENST00000634410 658 ntBASIC7.63□□□□□ -1.19
CDK5RAP3Q96JB5 AC006453.3-201ENST00000635891 377 ntBASIC7.63□□□□□ -1.19
CDK5RAP3Q96JB5 TC2N-202ENST00000360594 3751 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
CDK5RAP3Q96JB5 PCBP1-AS1-210ENST00000416395 2451 ntTSL 2 BASIC7.63□□□□□ -1.19
CDK5RAP3Q96JB5 CUBNP3-201ENST00000457461 1784 ntBASIC7.63□□□□□ -1.19
CDK5RAP3Q96JB5 RPGRIP1L-206ENST00000564374 3877 ntTSL 2 BASIC7.63□□□□□ -1.19
CDK5RAP3Q96JB5 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC7.63□□□□□ -1.19
CDK5RAP3Q96JB5 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
CDK5RAP3Q96JB5 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC7.63□□□□□ -1.19
CDK5RAP3Q96JB5 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC7.63□□□□□ -1.19
CDK5RAP3Q96JB5 AC001226.2-204ENST00000638101 2645 ntAPPRIS ALT2 TSL 5 BASIC7.63□□□□□ -1.19
CDK5RAP3Q96JB5 CX3CR1-202ENST00000399220 3106 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
CDK5RAP3Q96JB5 MAPK10-380ENST00000642015 3137 ntAPPRIS P2 BASIC7.63□□□□□ -1.19
CDK5RAP3Q96JB5 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
CDK5RAP3Q96JB5 TMEM217-202ENST00000356757 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
CDK5RAP3Q96JB5 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC7.62□□□□□ -1.19
CDK5RAP3Q96JB5 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
CDK5RAP3Q96JB5 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC7.62□□□□□ -1.19
CDK5RAP3Q96JB5 LDB2-216ENST00000515064 2295 ntAPPRIS ALT1 TSL 2 BASIC7.62□□□□□ -1.19
CDK5RAP3Q96JB5 SLC39A12-202ENST00000377371 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC7.62□□□□□ -1.19
CDK5RAP3Q96JB5 SLC26A7-202ENST00000309536 2656 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
CDK5RAP3Q96JB5 DTNA-221ENST00000591182 1787 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
CDK5RAP3Q96JB5 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
CDK5RAP3Q96JB5 NEK2P4-201ENST00000425793 1329 ntBASIC7.62□□□□□ -1.19
CDK5RAP3Q96JB5 AL512310.3-201ENST00000547023 1335 ntBASIC7.62□□□□□ -1.19
CDK5RAP3Q96JB5 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
CDK5RAP3Q96JB5 FKBP5-202ENST00000536438 3940 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
CDK5RAP3Q96JB5 HSPD1P1-201ENST00000503199 1726 ntBASIC7.62□□□□□ -1.19
CDK5RAP3Q96JB5 MGST2-201ENST00000265498 801 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
CDK5RAP3Q96JB5 OR10R2-201ENST00000368152 1008 ntAPPRIS P2 BASIC7.62□□□□□ -1.19
CDK5RAP3Q96JB5 MIR27A-201ENST00000385073 78 ntBASIC7.62□□□□□ -1.19
CDK5RAP3Q96JB5 USP9YP19-201ENST00000412165 485 ntBASIC7.62□□□□□ -1.19
CDK5RAP3Q96JB5 ZNF385D-AS1-201ENST00000412369 705 ntTSL 3 BASIC7.62□□□□□ -1.19
CDK5RAP3Q96JB5 RPLP1P10-201ENST00000413972 339 ntBASIC7.62□□□□□ -1.19
CDK5RAP3Q96JB5 AL137847.1-201ENST00000416473 444 ntTSL 2 BASIC7.62□□□□□ -1.19
CDK5RAP3Q96JB5 OR13C7-201ENST00000424348 959 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
CDK5RAP3Q96JB5 AC010978.1-202ENST00000427050 893 ntTSL 3 BASIC7.62□□□□□ -1.19
CDK5RAP3Q96JB5 TRGV7-201ENST00000427089 353 ntBASIC7.62□□□□□ -1.19
CDK5RAP3Q96JB5 AC239367.3-201ENST00000428996 814 ntBASIC7.62□□□□□ -1.19
CDK5RAP3Q96JB5 XKRYP6-201ENST00000440468 1116 ntBASIC7.62□□□□□ -1.19
CDK5RAP3Q96JB5 MIR4432HG-201ENST00000441598 470 ntTSL 3 BASIC7.62□□□□□ -1.19
CDK5RAP3Q96JB5 PGM5P3-AS1-202ENST00000442069 615 ntTSL 2 BASIC7.62□□□□□ -1.19
CDK5RAP3Q96JB5 XKRYP3-201ENST00000442113 1116 ntBASIC7.62□□□□□ -1.19
CDK5RAP3Q96JB5 MTND2P3-201ENST00000452458 470 ntBASIC7.62□□□□□ -1.19
CDK5RAP3Q96JB5 RN7SL143P-201ENST00000496780 297 ntBASIC7.62□□□□□ -1.19
CDK5RAP3Q96JB5 PTTG2-201ENST00000504686 691 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
CDK5RAP3Q96JB5 AC096736.3-201ENST00000510753 993 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms