Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Gm26105-201ENSMUST00000157253 190 ntBASIC2.56□□□□□ -2
Vps39Q8R5L3 Gm24475-201ENSMUST00000157435 143 ntBASIC2.56□□□□□ -2
Vps39Q8R5L3 Gm25373-201ENSMUST00000158156 115 ntBASIC2.56□□□□□ -2
Vps39Q8R5L3 Defa27-201ENSMUST00000167683 282 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Vps39Q8R5L3 Olfr180-201ENSMUST00000171656 1154 ntAPPRIS P2 TSL 2 BASIC2.56□□□□□ -2
Vps39Q8R5L3 Gm23145-201ENSMUST00000178912 79 ntBASIC2.56□□□□□ -2
Vps39Q8R5L3 Gm38316-201ENSMUST00000194838 469 ntTSL 5 BASIC2.56□□□□□ -2
Vps39Q8R5L3 Gm44387-201ENSMUST00000196298 145 ntBASIC2.56□□□□□ -2
Vps39Q8R5L3 Gm43101-202ENSMUST00000201733 488 ntTSL 2 BASIC2.56□□□□□ -2
Vps39Q8R5L3 Gm44060-201ENSMUST00000204440 410 ntBASIC2.56□□□□□ -2
Vps39Q8R5L3 Gm45678-201ENSMUST00000210509 295 ntBASIC2.56□□□□□ -2
Vps39Q8R5L3 Olfr962-ps1-201ENSMUST00000217332 442 ntBASIC2.56□□□□□ -2
Vps39Q8R5L3 AC160031.2-201ENSMUST00000218242 274 ntBASIC2.56□□□□□ -2
Vps39Q8R5L3 Gm2436-201ENSMUST00000219562 774 ntBASIC2.56□□□□□ -2
Vps39Q8R5L3 4930567K20Rik-203ENSMUST00000220108 646 ntTSL 5 BASIC2.56□□□□□ -2
Vps39Q8R5L3 AC192616.1-201ENSMUST00000221922 132 ntBASIC2.56□□□□□ -2
Vps39Q8R5L3 Gm29687-201ENSMUST00000223022 879 ntTSL 1 (best) BASIC2.56□□□□□ -2
Vps39Q8R5L3 AC125350.4-201ENSMUST00000225895 273 ntBASIC2.56□□□□□ -2
Vps39Q8R5L3 mt-Co2-201ENSMUST00000082405 684 ntAPPRIS P1 BASIC2.56□□□□□ -2
Vps39Q8R5L3 Snord104-201ENSMUST00000083192 70 ntBASIC2.56□□□□□ -2
Vps39Q8R5L3 Rgs13-202ENSMUST00000111941 1545 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Vps39Q8R5L3 Gm650-201ENSMUST00000144428 1551 ntBASIC2.56□□□□□ -2
Vps39Q8R5L3 Ccdc178-201ENSMUST00000025160 3335 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Vps39Q8R5L3 Trbv30-201ENSMUST00000103282 332 ntAPPRIS ALT2 BASIC2.55□□□□□ -2
Vps39Q8R5L3 Gm23175-201ENSMUST00000104371 132 ntBASIC2.55□□□□□ -2
Vps39Q8R5L3 Gm11321-201ENSMUST00000121257 902 ntBASIC2.55□□□□□ -2
Vps39Q8R5L3 Gm13793-201ENSMUST00000124214 438 ntTSL 2 BASIC2.55□□□□□ -2
Vps39Q8R5L3 Gm15961-201ENSMUST00000156090 266 ntTSL 3 BASIC2.55□□□□□ -2
Vps39Q8R5L3 Gm23600-201ENSMUST00000157260 71 ntBASIC2.55□□□□□ -2
Vps39Q8R5L3 Gm25220-201ENSMUST00000157546 95 ntBASIC2.55□□□□□ -2
Vps39Q8R5L3 Gm23223-201ENSMUST00000158119 127 ntBASIC2.55□□□□□ -2
Vps39Q8R5L3 Mir3965-201ENSMUST00000175570 69 ntBASIC2.55□□□□□ -2
Vps39Q8R5L3 Vmn1r-ps144-201ENSMUST00000177291 939 ntBASIC2.55□□□□□ -2
Vps39Q8R5L3 Gm21798-201ENSMUST00000180105 261 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Vps39Q8R5L3 Gm25528-201ENSMUST00000180264 132 ntBASIC2.55□□□□□ -2
Vps39Q8R5L3 Gm27249-201ENSMUST00000185049 328 ntBASIC2.55□□□□□ -2
Vps39Q8R5L3 Gm38127-201ENSMUST00000191978 468 ntTSL 5 BASIC2.55□□□□□ -2
Vps39Q8R5L3 Gm44073-201ENSMUST00000204173 429 ntTSL 3 BASIC2.55□□□□□ -2
Vps39Q8R5L3 Gm45522-201ENSMUST00000210784 166 ntBASIC2.55□□□□□ -2
Vps39Q8R5L3 Olfr991-ps1-201ENSMUST00000215967 908 ntBASIC2.55□□□□□ -2
Vps39Q8R5L3 AC124537.1-201ENSMUST00000222890 159 ntBASIC2.55□□□□□ -2
Vps39Q8R5L3 Cox7b2-201ENSMUST00000050129 542 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
Vps39Q8R5L3 Gm22249-201ENSMUST00000082485 136 ntBASIC2.55□□□□□ -2
Vps39Q8R5L3 Gm23741-201ENSMUST00000097237 171 ntBASIC2.55□□□□□ -2
Vps39Q8R5L3 Gm37331-201ENSMUST00000192367 3375 ntBASIC2.54□□□□□ -2
Vps39Q8R5L3 AC123052.1-201ENSMUST00000220604 4616 ntBASIC2.54□□□□□ -2
Vps39Q8R5L3 Gm22496-201ENSMUST00000104493 88 ntBASIC2.54□□□□□ -2
Vps39Q8R5L3 Mir1192-201ENSMUST00000116976 121 ntBASIC2.54□□□□□ -2
Vps39Q8R5L3 Gm12584-201ENSMUST00000117109 1105 ntBASIC2.54□□□□□ -2
Vps39Q8R5L3 Gm15497-201ENSMUST00000119137 551 ntBASIC2.54□□□□□ -2
Vps39Q8R5L3 Gm14593-201ENSMUST00000119948 294 ntBASIC2.54□□□□□ -2
Vps39Q8R5L3 Gm12096-201ENSMUST00000121149 829 ntBASIC2.54□□□□□ -2
Vps39Q8R5L3 Gm28305-201ENSMUST00000147249 365 ntAPPRIS P1 TSL 2 BASIC2.54□□□□□ -2
Vps39Q8R5L3 Gm22611-201ENSMUST00000158288 150 ntBASIC2.54□□□□□ -2
Vps39Q8R5L3 Gm24546-201ENSMUST00000158652 102 ntBASIC2.54□□□□□ -2
Vps39Q8R5L3 Gm20794-201ENSMUST00000177626 628 ntBASIC2.54□□□□□ -2
Vps39Q8R5L3 Gm21095-201ENSMUST00000177775 498 ntTSL 5 BASIC2.54□□□□□ -2
Vps39Q8R5L3 Gm22584-201ENSMUST00000177935 92 ntBASIC2.54□□□□□ -2
Vps39Q8R5L3 Gm20916-201ENSMUST00000178063 498 ntTSL 5 BASIC2.54□□□□□ -2
Vps39Q8R5L3 Gm25175-201ENSMUST00000178712 79 ntBASIC2.54□□□□□ -2
Vps39Q8R5L3 Gm21760-201ENSMUST00000179811 498 ntTSL 5 BASIC2.54□□□□□ -2
Vps39Q8R5L3 Gm21477-201ENSMUST00000179970 498 ntTSL 5 BASIC2.54□□□□□ -2
Vps39Q8R5L3 Gm21117-201ENSMUST00000180133 498 ntTSL 5 BASIC2.54□□□□□ -2
Vps39Q8R5L3 Gm20855-201ENSMUST00000180170 498 ntTSL 5 BASIC2.54□□□□□ -2
Vps39Q8R5L3 Gm20931-201ENSMUST00000180249 498 ntTSL 5 BASIC2.54□□□□□ -2
Vps39Q8R5L3 Gm20896-201ENSMUST00000180332 498 ntTSL 5 BASIC2.54□□□□□ -2
Vps39Q8R5L3 Mir6382-201ENSMUST00000184055 110 ntBASIC2.54□□□□□ -2
Vps39Q8R5L3 Ranbp2-ps9-201ENSMUST00000184566 382 ntBASIC2.54□□□□□ -2
Vps39Q8R5L3 Gm28356-202ENSMUST00000187566 858 ntBASIC2.54□□□□□ -2
Vps39Q8R5L3 Gm28449-201ENSMUST00000187655 506 ntTSL 3 BASIC2.54□□□□□ -2
Vps39Q8R5L3 Gm6657-203ENSMUST00000188791 531 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
Vps39Q8R5L3 Gm20885-201ENSMUST00000190192 654 ntBASIC2.54□□□□□ -2
Vps39Q8R5L3 Gm20915-201ENSMUST00000191575 663 ntBASIC2.54□□□□□ -2
Vps39Q8R5L3 Gm36866-201ENSMUST00000193343 657 ntBASIC2.54□□□□□ -2
Vps39Q8R5L3 Gm36047-201ENSMUST00000193659 657 ntBASIC2.54□□□□□ -2
Vps39Q8R5L3 Trbv6-201ENSMUST00000193743 276 ntBASIC2.54□□□□□ -2
Vps39Q8R5L3 Gm20857-201ENSMUST00000194766 657 ntBASIC2.54□□□□□ -2
Vps39Q8R5L3 Gm20858-201ENSMUST00000195459 657 ntBASIC2.54□□□□□ -2
Vps39Q8R5L3 Gm42825-201ENSMUST00000198883 723 ntTSL 2 BASIC2.54□□□□□ -2
Vps39Q8R5L3 Gm42857-201ENSMUST00000200823 339 ntBASIC2.54□□□□□ -2
Vps39Q8R5L3 Gm43810-201ENSMUST00000201018 232 ntBASIC2.54□□□□□ -2
Vps39Q8R5L3 Gm45226-201ENSMUST00000206602 288 ntBASIC2.54□□□□□ -2
Vps39Q8R5L3 Gm17991-201ENSMUST00000208139 297 ntBASIC2.54□□□□□ -2
Vps39Q8R5L3 AC121844.1-201ENSMUST00000218706 137 ntBASIC2.54□□□□□ -2
Vps39Q8R5L3 2010106E10Rik-201ENSMUST00000026602 1257 ntTSL 1 (best) BASIC2.54□□□□□ -2
Vps39Q8R5L3 Olfr305-201ENSMUST00000069236 960 ntAPPRIS P1 BASIC2.54□□□□□ -2
Vps39Q8R5L3 Olfr823-201ENSMUST00000081469 948 ntAPPRIS P1 BASIC2.54□□□□□ -2
Vps39Q8R5L3 n-R5s40-201ENSMUST00000082475 124 ntBASIC2.54□□□□□ -2
Vps39Q8R5L3 Mir19a-201ENSMUST00000083482 82 ntBASIC2.54□□□□□ -2
Vps39Q8R5L3 Olfr1461-202ENSMUST00000207113 3481 ntAPPRIS P1 TSL 2 BASIC2.54□□□□□ -2
Vps39Q8R5L3 AC117199.1-201ENSMUST00000219940 3132 ntBASIC2.54□□□□□ -2
Vps39Q8R5L3 Gm37664-201ENSMUST00000194607 3813 ntBASIC2.54□□□□□ -2
Vps39Q8R5L3 Gm45872-201ENSMUST00000209804 1584 ntBASIC2.53□□□□□ -2
Vps39Q8R5L3 Rgs1-208ENSMUST00000189061 3841 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Vps39Q8R5L3 Ccdc7b-201ENSMUST00000026912 1447 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Vps39Q8R5L3 Mir582-201ENSMUST00000103758 81 ntBASIC2.53□□□□□ -2
Vps39Q8R5L3 Gm14899-201ENSMUST00000118673 548 ntBASIC2.53□□□□□ -2
Vps39Q8R5L3 Gm24627-201ENSMUST00000122764 138 ntBASIC2.53□□□□□ -2
Vps39Q8R5L3 Gm24436-201ENSMUST00000157889 302 ntBASIC2.53□□□□□ -2
Vps39Q8R5L3 Hmgb3-ps-201ENSMUST00000162465 601 ntBASIC2.53□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 125.7 ms