Protein–RNA interactions for Protein: Q8R370

Ushbp1, Usher syndrome type-1C protein-binding protein 1, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1Q8R370 Gm14821-201ENSMUST00000121975 435 ntBASIC4.03□□□□□ -1.76
Ushbp1Q8R370 Gm12729-201ENSMUST00000130088 624 ntTSL 3 BASIC4.03□□□□□ -1.76
Ushbp1Q8R370 Gm15521-201ENSMUST00000141752 835 ntTSL 2 BASIC4.03□□□□□ -1.76
Ushbp1Q8R370 Gm16354-201ENSMUST00000155376 150 ntBASIC4.03□□□□□ -1.76
Ushbp1Q8R370 Gm21797-201ENSMUST00000177579 543 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Ushbp1Q8R370 Gm23660-201ENSMUST00000178362 79 ntBASIC4.03□□□□□ -1.76
Ushbp1Q8R370 Gm21767-201ENSMUST00000178689 543 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Ushbp1Q8R370 Gm24088-201ENSMUST00000179100 79 ntBASIC4.03□□□□□ -1.76
Ushbp1Q8R370 Gm21822-201ENSMUST00000179302 543 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Ushbp1Q8R370 Mir7050-201ENSMUST00000184636 60 ntBASIC4.03□□□□□ -1.76
Ushbp1Q8R370 Scgb2b29-ps-201ENSMUST00000187539 331 ntBASIC4.03□□□□□ -1.76
Ushbp1Q8R370 Gm29350-201ENSMUST00000189141 541 ntBASIC4.03□□□□□ -1.76
Ushbp1Q8R370 Gm45814-201ENSMUST00000212646 775 ntBASIC4.03□□□□□ -1.76
Ushbp1Q8R370 AC114575.1-201ENSMUST00000218634 353 ntTSL 3 BASIC4.03□□□□□ -1.76
Ushbp1Q8R370 Gm21007-201ENSMUST00000221024 326 ntBASIC4.03□□□□□ -1.76
Ushbp1Q8R370 AC159885.1-201ENSMUST00000222221 199 ntBASIC4.03□□□□□ -1.76
Ushbp1Q8R370 Gm22154-201ENSMUST00000083844 131 ntBASIC4.03□□□□□ -1.76
Ushbp1Q8R370 Gm10553-201ENSMUST00000097669 372 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Ushbp1Q8R370 Gm18360-201ENSMUST00000173327 1524 ntBASIC4.03□□□□□ -1.76
Ushbp1Q8R370 Olfr617-202ENSMUST00000215755 3000 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Ushbp1Q8R370 Vmn2r-ps104-201ENSMUST00000099416 1671 ntTSL 5 BASIC4.03□□□□□ -1.76
Ushbp1Q8R370 Olfr1130-202ENSMUST00000216580 2648 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Ushbp1Q8R370 Olfr1183-203ENSMUST00000219871 8353 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Ushbp1Q8R370 Mrgprx2-201ENSMUST00000098433 4610 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Ushbp1Q8R370 Btf3l4-201ENSMUST00000102739 723 ntAPPRIS P1 TSL 3 BASIC4.02□□□□□ -1.77
Ushbp1Q8R370 Igkv5-39-201ENSMUST00000103370 287 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Ushbp1Q8R370 Gm26387-201ENSMUST00000104238 132 ntBASIC4.02□□□□□ -1.77
Ushbp1Q8R370 Prl3c1-202ENSMUST00000110364 850 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
Ushbp1Q8R370 Gm15142-201ENSMUST00000121013 856 ntBASIC4.02□□□□□ -1.77
Ushbp1Q8R370 Gm23602-201ENSMUST00000157258 132 ntBASIC4.02□□□□□ -1.77
Ushbp1Q8R370 Gm25283-201ENSMUST00000157272 77 ntBASIC4.02□□□□□ -1.77
Ushbp1Q8R370 Ear10-201ENSMUST00000159175 678 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Ushbp1Q8R370 Gm37698-201ENSMUST00000192605 463 ntBASIC4.02□□□□□ -1.77
Ushbp1Q8R370 Igkv2-113-201ENSMUST00000196138 362 ntBASIC4.02□□□□□ -1.77
Ushbp1Q8R370 Gm44959-201ENSMUST00000209127 231 ntBASIC4.02□□□□□ -1.77
Ushbp1Q8R370 Gm25581-201ENSMUST00000083410 164 ntBASIC4.02□□□□□ -1.77
Ushbp1Q8R370 Gm22577-201ENSMUST00000083731 109 ntBASIC4.02□□□□□ -1.77
Ushbp1Q8R370 Olfr577-203ENSMUST00000215237 3144 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Ushbp1Q8R370 D3Ertd254e-201ENSMUST00000165956 6503 ntTSL 3 BASIC4.02□□□□□ -1.77
Ushbp1Q8R370 Gm10324-201ENSMUST00000092528 1815 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Ushbp1Q8R370 Gm381-201ENSMUST00000117443 2037 ntBASIC4.02□□□□□ -1.77
Ushbp1Q8R370 Gm37645-201ENSMUST00000194285 3556 ntBASIC4.02□□□□□ -1.77
Ushbp1Q8R370 Glra2-201ENSMUST00000058787 3150 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Ushbp1Q8R370 Olfr235-205ENSMUST00000214638 3459 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Ushbp1Q8R370 Gm3636-202ENSMUST00000163850 1746 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
Ushbp1Q8R370 Olfr665-204ENSMUST00000216971 3248 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Ushbp1Q8R370 Gm14443-201ENSMUST00000109054 4516 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Ushbp1Q8R370 Gm9911-201ENSMUST00000211467 2802 ntBASIC4.01□□□□□ -1.77
Ushbp1Q8R370 Vmn2r75-201ENSMUST00000167830 2562 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Ushbp1Q8R370 Gm14570-201ENSMUST00000119444 391 ntBASIC4.01□□□□□ -1.77
Ushbp1Q8R370 Gm16005-201ENSMUST00000120515 269 ntBASIC4.01□□□□□ -1.77
Ushbp1Q8R370 Gm15244-201ENSMUST00000121122 130 ntBASIC4.01□□□□□ -1.77
Ushbp1Q8R370 Gm11384-201ENSMUST00000121376 303 ntBASIC4.01□□□□□ -1.77
Ushbp1Q8R370 Gm14578-201ENSMUST00000122166 391 ntBASIC4.01□□□□□ -1.77
Ushbp1Q8R370 Gm13943-201ENSMUST00000144043 343 ntTSL 5 BASIC4.01□□□□□ -1.77
Ushbp1Q8R370 Gm25341-201ENSMUST00000157461 268 ntBASIC4.01□□□□□ -1.77
Ushbp1Q8R370 Gm23579-201ENSMUST00000158528 103 ntBASIC4.01□□□□□ -1.77
Ushbp1Q8R370 Gm28010-201ENSMUST00000179485 126 ntBASIC4.01□□□□□ -1.77
Ushbp1Q8R370 Gm6947-201ENSMUST00000186254 78 ntBASIC4.01□□□□□ -1.77
Ushbp1Q8R370 Smcp-202ENSMUST00000194965 744 ntAPPRIS P1 TSL 3 BASIC4.01□□□□□ -1.77
Ushbp1Q8R370 Gm37290-201ENSMUST00000195775 339 ntBASIC4.01□□□□□ -1.77
Ushbp1Q8R370 Gm43115-201ENSMUST00000196244 160 ntBASIC4.01□□□□□ -1.77
Ushbp1Q8R370 Gm44343-201ENSMUST00000196702 90 ntBASIC4.01□□□□□ -1.77
Ushbp1Q8R370 Gm44324-201ENSMUST00000198517 135 ntBASIC4.01□□□□□ -1.77
Ushbp1Q8R370 Gm44012-201ENSMUST00000204154 424 ntTSL 3 BASIC4.01□□□□□ -1.77
Ushbp1Q8R370 Gm19252-201ENSMUST00000204705 305 ntBASIC4.01□□□□□ -1.77
Ushbp1Q8R370 Gm33424-201ENSMUST00000222317 257 ntTSL 5 BASIC4.01□□□□□ -1.77
Ushbp1Q8R370 Scgb1a1-201ENSMUST00000025554 476 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Ushbp1Q8R370 Gm25205-201ENSMUST00000082841 103 ntBASIC4.01□□□□□ -1.77
Ushbp1Q8R370 Gm24045-201ENSMUST00000083113 98 ntBASIC4.01□□□□□ -1.77
Ushbp1Q8R370 Gm25480-201ENSMUST00000083217 133 ntBASIC4.01□□□□□ -1.77
Ushbp1Q8R370 AC122887.2-201ENSMUST00000219465 1603 ntBASIC4.01□□□□□ -1.77
Ushbp1Q8R370 Olfr392-201ENSMUST00000118463 3643 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
Ushbp1Q8R370 Trav14d-2-201ENSMUST00000103597 276 ntAPPRIS P1 BASIC4□□□□□ -1.77
Ushbp1Q8R370 Trav14n-2-201ENSMUST00000103623 276 ntAPPRIS P1 BASIC4□□□□□ -1.77
Ushbp1Q8R370 n-R5s52-201ENSMUST00000104614 113 ntBASIC4□□□□□ -1.77
Ushbp1Q8R370 Gm7164-201ENSMUST00000117503 450 ntBASIC4□□□□□ -1.77
Ushbp1Q8R370 Gm11577-201ENSMUST00000118030 737 ntBASIC4□□□□□ -1.77
Ushbp1Q8R370 Gm14287-201ENSMUST00000121060 117 ntBASIC4□□□□□ -1.77
Ushbp1Q8R370 Gm15167-201ENSMUST00000121997 187 ntBASIC4□□□□□ -1.77
Ushbp1Q8R370 Gm21814-201ENSMUST00000144085 291 ntTSL 5 BASIC4□□□□□ -1.77
Ushbp1Q8R370 4930518C09Rik-201ENSMUST00000172700 478 ntTSL 1 (best) BASIC4□□□□□ -1.77
Ushbp1Q8R370 Gm27903-201ENSMUST00000175482 126 ntBASIC4□□□□□ -1.77
Ushbp1Q8R370 Gm20698-201ENSMUST00000175657 233 ntBASIC4□□□□□ -1.77
Ushbp1Q8R370 Gm25284-201ENSMUST00000180345 141 ntBASIC4□□□□□ -1.77
Ushbp1Q8R370 Mir7081-201ENSMUST00000184490 75 ntBASIC4□□□□□ -1.77
Ushbp1Q8R370 Trav14-2-202ENSMUST00000184874 276 ntAPPRIS P1 BASIC4□□□□□ -1.77
Ushbp1Q8R370 Gm13266-203ENSMUST00000193364 421 ntTSL 3 BASIC4□□□□□ -1.77
Ushbp1Q8R370 1700027F06Rik-201ENSMUST00000203901 243 ntTSL 1 (best) BASIC4□□□□□ -1.77
Ushbp1Q8R370 Gm45772-201ENSMUST00000212961 240 ntBASIC4□□□□□ -1.77
Ushbp1Q8R370 Gm35190-201ENSMUST00000222335 526 ntTSL 3 BASIC4□□□□□ -1.77
Ushbp1Q8R370 AC124549.2-201ENSMUST00000224243 222 ntBASIC4□□□□□ -1.77
Ushbp1Q8R370 Ssxa1-201ENSMUST00000072593 433 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Ushbp1Q8R370 Mir128-1-201ENSMUST00000083586 70 ntBASIC4□□□□□ -1.77
Ushbp1Q8R370 Mir101b-201ENSMUST00000083622 97 ntBASIC4□□□□□ -1.77
Ushbp1Q8R370 Gm10242-201ENSMUST00000090064 330 ntBASIC4□□□□□ -1.77
Ushbp1Q8R370 Olfr912-201ENSMUST00000217160 5726 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
Ushbp1Q8R370 Olfr1093-202ENSMUST00000213354 2240 ntAPPRIS P1 TSL 3 BASIC4□□□□□ -1.77
Ushbp1Q8R370 Olfr836-202ENSMUST00000212730 5045 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
Ushbp1Q8R370 Olfr836-203ENSMUST00000215981 5046 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 87.9 ms