Protein–RNA interactions for Protein: Q8R1F9

Rpp40, Ribonuclease P protein subunit p40, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp40Q8R1F9 Gm18982-201ENSMUST00000198118 529 ntBASIC3.18□□□□□ -1.9
Rpp40Q8R1F9 Gm44657-201ENSMUST00000208568 450 ntBASIC3.18□□□□□ -1.9
Rpp40Q8R1F9 Gm45344-201ENSMUST00000211610 341 ntBASIC3.18□□□□□ -1.9
Rpp40Q8R1F9 AC167721.1-201ENSMUST00000217088 279 ntBASIC3.18□□□□□ -1.9
Rpp40Q8R1F9 AC140254.1-201ENSMUST00000220063 331 ntBASIC3.18□□□□□ -1.9
Rpp40Q8R1F9 Tgif2lx2-201ENSMUST00000072518 1030 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Rpp40Q8R1F9 Tgif2lx1-201ENSMUST00000073857 1030 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Rpp40Q8R1F9 Gm23296-201ENSMUST00000082555 107 ntBASIC3.18□□□□□ -1.9
Rpp40Q8R1F9 Gm24859-201ENSMUST00000082729 107 ntBASIC3.18□□□□□ -1.9
Rpp40Q8R1F9 AC121598.3-201ENSMUST00000227179 1643 ntBASIC3.18□□□□□ -1.9
Rpp40Q8R1F9 Ms4a14-201ENSMUST00000187467 4065 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Rpp40Q8R1F9 Gm42524-201ENSMUST00000202881 2214 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
Rpp40Q8R1F9 Adam29-201ENSMUST00000053441 2726 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Rpp40Q8R1F9 A930027P06Rik-201ENSMUST00000221298 2975 ntBASIC3.17□□□□□ -1.9
Rpp40Q8R1F9 Gm14971-201ENSMUST00000117980 663 ntBASIC3.17□□□□□ -1.9
Rpp40Q8R1F9 Gm25807-201ENSMUST00000122783 305 ntBASIC3.17□□□□□ -1.9
Rpp40Q8R1F9 Gm14562-201ENSMUST00000129885 543 ntBASIC3.17□□□□□ -1.9
Rpp40Q8R1F9 Gm23068-201ENSMUST00000158239 293 ntBASIC3.17□□□□□ -1.9
Rpp40Q8R1F9 Gm22633-201ENSMUST00000179834 107 ntBASIC3.17□□□□□ -1.9
Rpp40Q8R1F9 Gm26870-201ENSMUST00000181242 1170 ntTSL 5 BASIC3.17□□□□□ -1.9
Rpp40Q8R1F9 Gm27226-201ENSMUST00000184676 511 ntTSL 2 BASIC3.17□□□□□ -1.9
Rpp40Q8R1F9 Gm28628-201ENSMUST00000187006 264 ntBASIC3.17□□□□□ -1.9
Rpp40Q8R1F9 Gm28629-201ENSMUST00000187309 263 ntBASIC3.17□□□□□ -1.9
Rpp40Q8R1F9 Gm20832-201ENSMUST00000189076 665 ntBASIC3.17□□□□□ -1.9
Rpp40Q8R1F9 Gm28241-201ENSMUST00000190916 235 ntBASIC3.17□□□□□ -1.9
Rpp40Q8R1F9 Gm30638-201ENSMUST00000195570 656 ntBASIC3.17□□□□□ -1.9
Rpp40Q8R1F9 Gm36728-201ENSMUST00000195782 665 ntBASIC3.17□□□□□ -1.9
Rpp40Q8R1F9 Gm44393-201ENSMUST00000197418 138 ntBASIC3.17□□□□□ -1.9
Rpp40Q8R1F9 Gm45455-202ENSMUST00000211156 630 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
Rpp40Q8R1F9 Gm6842-201ENSMUST00000211361 390 ntBASIC3.17□□□□□ -1.9
Rpp40Q8R1F9 Gm30155-201ENSMUST00000223458 339 ntBASIC3.17□□□□□ -1.9
Rpp40Q8R1F9 AC167192.2-201ENSMUST00000224794 198 ntBASIC3.17□□□□□ -1.9
Rpp40Q8R1F9 CT030182.3-201ENSMUST00000225986 582 ntBASIC3.17□□□□□ -1.9
Rpp40Q8R1F9 AC144628.2-201ENSMUST00000227374 352 ntBASIC3.17□□□□□ -1.9
Rpp40Q8R1F9 AC112935.1-201ENSMUST00000227603 250 ntBASIC3.17□□□□□ -1.9
Rpp40Q8R1F9 Olfr235-201ENSMUST00000073507 1079 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Rpp40Q8R1F9 Gm23650-201ENSMUST00000083355 70 ntBASIC3.17□□□□□ -1.9
Rpp40Q8R1F9 Vmn1r219-204ENSMUST00000228113 5639 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Rpp40Q8R1F9 Gm26573-201ENSMUST00000181199 3020 ntTSL 5 BASIC3.17□□□□□ -1.9
Rpp40Q8R1F9 Gm43256-201ENSMUST00000199995 3091 ntBASIC3.16□□□□□ -1.9
Rpp40Q8R1F9 Gm44049-201ENSMUST00000204905 2984 ntBASIC3.16□□□□□ -1.9
Rpp40Q8R1F9 Olfr136-203ENSMUST00000208539 1773 ntAPPRIS P1 TSL 3 BASIC3.16□□□□□ -1.9
Rpp40Q8R1F9 Vmn1r-ps116-201ENSMUST00000121544 292 ntBASIC3.16□□□□□ -1.9
Rpp40Q8R1F9 Gm23183-201ENSMUST00000122595 323 ntBASIC3.16□□□□□ -1.9
Rpp40Q8R1F9 Gm14364-201ENSMUST00000129209 267 ntBASIC3.16□□□□□ -1.9
Rpp40Q8R1F9 Gm3848-202ENSMUST00000151564 301 ntTSL 3 BASIC3.16□□□□□ -1.9
Rpp40Q8R1F9 Gm26101-201ENSMUST00000157246 105 ntBASIC3.16□□□□□ -1.9
Rpp40Q8R1F9 Gm16572-201ENSMUST00000160258 279 ntTSL 3 BASIC3.16□□□□□ -1.9
Rpp40Q8R1F9 Gm17117-201ENSMUST00000163665 299 ntBASIC3.16□□□□□ -1.9
Rpp40Q8R1F9 Obox4-ps6-201ENSMUST00000176578 724 ntBASIC3.16□□□□□ -1.9
Rpp40Q8R1F9 Gm21746-201ENSMUST00000177612 543 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Rpp40Q8R1F9 Gm21893-201ENSMUST00000179119 397 ntBASIC3.16□□□□□ -1.9
Rpp40Q8R1F9 Snord116l14-201ENSMUST00000179875 94 ntBASIC3.16□□□□□ -1.9
Rpp40Q8R1F9 Sult2a6-202ENSMUST00000184731 664 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
Rpp40Q8R1F9 Gm37281-201ENSMUST00000192412 439 ntBASIC3.16□□□□□ -1.9
Rpp40Q8R1F9 Gm37353-201ENSMUST00000194497 313 ntBASIC3.16□□□□□ -1.9
Rpp40Q8R1F9 Mirlet7f-1-201ENSMUST00000198652 89 ntBASIC3.16□□□□□ -1.9
Rpp40Q8R1F9 Gm43415-201ENSMUST00000201934 750 ntBASIC3.16□□□□□ -1.9
Rpp40Q8R1F9 Gm44941-201ENSMUST00000204216 627 ntTSL 2 BASIC3.16□□□□□ -1.9
Rpp40Q8R1F9 AC109212.1-201ENSMUST00000215561 427 ntBASIC3.16□□□□□ -1.9
Rpp40Q8R1F9 Gm25853-201ENSMUST00000082793 132 ntBASIC3.16□□□□□ -1.9
Rpp40Q8R1F9 Gm22154-201ENSMUST00000083844 131 ntBASIC3.16□□□□□ -1.9
Rpp40Q8R1F9 Gm23741-201ENSMUST00000097237 171 ntBASIC3.16□□□□□ -1.9
Rpp40Q8R1F9 Gm813-201ENSMUST00000099663 702 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Rpp40Q8R1F9 Gm37236-201ENSMUST00000193670 3249 ntBASIC3.16□□□□□ -1.9
Rpp40Q8R1F9 Olfr186-203ENSMUST00000216415 2323 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Rpp40Q8R1F9 Olfr1477-202ENSMUST00000217001 4000 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
Rpp40Q8R1F9 Btla-202ENSMUST00000102802 3251 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
Rpp40Q8R1F9 Olfr849-202ENSMUST00000217273 6140 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Rpp40Q8R1F9 AC122850.1-201ENSMUST00000220380 5690 ntBASIC3.15□□□□□ -1.9
Rpp40Q8R1F9 Vmn1r30-203ENSMUST00000227466 1798 ntAPPRIS P1 BASIC3.15□□□□□ -1.9
Rpp40Q8R1F9 Olfr789-202ENSMUST00000213992 4421 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
Rpp40Q8R1F9 Olfr844-202ENSMUST00000220268 1686 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
Rpp40Q8R1F9 Wnk3-201ENSMUST00000096285 8551 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
Rpp40Q8R1F9 Mir499-201ENSMUST00000102357 79 ntBASIC3.15□□□□□ -1.91
Rpp40Q8R1F9 Gm11785-201ENSMUST00000120165 601 ntBASIC3.15□□□□□ -1.91
Rpp40Q8R1F9 Gm11849-201ENSMUST00000121293 261 ntBASIC3.15□□□□□ -1.91
Rpp40Q8R1F9 Gm12238-201ENSMUST00000127764 124 ntBASIC3.15□□□□□ -1.91
Rpp40Q8R1F9 Gm16289-201ENSMUST00000162079 183 ntBASIC3.15□□□□□ -1.91
Rpp40Q8R1F9 Gm17187-201ENSMUST00000164622 410 ntBASIC3.15□□□□□ -1.91
Rpp40Q8R1F9 Gm27490-201ENSMUST00000184754 128 ntBASIC3.15□□□□□ -1.91
Rpp40Q8R1F9 Gm43578-201ENSMUST00000201250 459 ntBASIC3.15□□□□□ -1.91
Rpp40Q8R1F9 Gm44142-201ENSMUST00000203358 311 ntBASIC3.15□□□□□ -1.91
Rpp40Q8R1F9 Mgst1-208ENSMUST00000204628 471 ntTSL 3 BASIC3.15□□□□□ -1.91
Rpp40Q8R1F9 Zfp813-ps-202ENSMUST00000204773 618 ntTSL 5 BASIC3.15□□□□□ -1.91
Rpp40Q8R1F9 Olfr717-ps1-201ENSMUST00000205589 556 ntBASIC3.15□□□□□ -1.91
Rpp40Q8R1F9 Gm44715-201ENSMUST00000209049 3839 ntBASIC3.15□□□□□ -1.91
Rpp40Q8R1F9 AC116589.3-202ENSMUST00000221770 649 ntBASIC3.15□□□□□ -1.91
Rpp40Q8R1F9 AC116589.6-201ENSMUST00000222252 649 ntBASIC3.15□□□□□ -1.91
Rpp40Q8R1F9 Gm16368-201ENSMUST00000222340 435 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Rpp40Q8R1F9 Gm40548-201ENSMUST00000223522 644 ntTSL 3 BASIC3.15□□□□□ -1.91
Rpp40Q8R1F9 AC115735.3-201ENSMUST00000227757 513 ntBASIC3.15□□□□□ -1.91
Rpp40Q8R1F9 Gm23242-201ENSMUST00000083055 107 ntBASIC3.15□□□□□ -1.91
Rpp40Q8R1F9 Mroh9-201ENSMUST00000096608 2956 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Rpp40Q8R1F9 Gm42684-201ENSMUST00000197663 3615 ntBASIC3.15□□□□□ -1.91
Rpp40Q8R1F9 Zfp987-201ENSMUST00000091878 2798 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Rpp40Q8R1F9 Olfr1111-202ENSMUST00000214492 1616 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
Rpp40Q8R1F9 Chst9-201ENSMUST00000053017 1620 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Rpp40Q8R1F9 Depdc1a-201ENSMUST00000029825 2920 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
Rpp40Q8R1F9 Gm24889-201ENSMUST00000104388 132 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 67.1 ms