Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Gm5168-202ENSMUST00000168002 636 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
Ccdc28bQ8CEG5 Gm24713-201ENSMUST00000178850 107 ntBASIC2.83□□□□□ -1.96
Ccdc28bQ8CEG5 Gm5935-202ENSMUST00000178986 639 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
Ccdc28bQ8CEG5 Gm25448-201ENSMUST00000180065 107 ntBASIC2.83□□□□□ -1.96
Ccdc28bQ8CEG5 Gm24518-201ENSMUST00000180275 94 ntBASIC2.83□□□□□ -1.96
Ccdc28bQ8CEG5 Sumo1-203ENSMUST00000185265 532 ntTSL 3 BASIC2.83□□□□□ -1.96
Ccdc28bQ8CEG5 Gm18956-201ENSMUST00000192857 480 ntBASIC2.83□□□□□ -1.96
Ccdc28bQ8CEG5 Gm43991-201ENSMUST00000203751 274 ntBASIC2.83□□□□□ -1.96
Ccdc28bQ8CEG5 Gm7039-201ENSMUST00000205138 346 ntBASIC2.83□□□□□ -1.96
Ccdc28bQ8CEG5 Gm33501-202ENSMUST00000209983 706 ntTSL 5 BASIC2.83□□□□□ -1.96
Ccdc28bQ8CEG5 Gm45556-201ENSMUST00000210689 345 ntTSL 5 BASIC2.83□□□□□ -1.96
Ccdc28bQ8CEG5 Gm45522-201ENSMUST00000210784 166 ntBASIC2.83□□□□□ -1.96
Ccdc28bQ8CEG5 Gm7422-201ENSMUST00000220115 640 ntBASIC2.83□□□□□ -1.96
Ccdc28bQ8CEG5 CT009604.2-201ENSMUST00000225531 377 ntBASIC2.83□□□□□ -1.96
Ccdc28bQ8CEG5 Gm26055-201ENSMUST00000083038 107 ntBASIC2.83□□□□□ -1.96
Ccdc28bQ8CEG5 Gm23645-201ENSMUST00000083228 108 ntBASIC2.83□□□□□ -1.96
Ccdc28bQ8CEG5 Gm24765-201ENSMUST00000083691 103 ntBASIC2.83□□□□□ -1.96
Ccdc28bQ8CEG5 Olfr251-202ENSMUST00000214865 4930 ntAPPRIS ALT2 TSL 5 BASIC2.83□□□□□ -1.96
Ccdc28bQ8CEG5 Olfr910-201ENSMUST00000215122 1996 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
Ccdc28bQ8CEG5 Zfp970-202ENSMUST00000108952 1569 ntAPPRIS P1 TSL 2 BASIC2.83□□□□□ -1.96
Ccdc28bQ8CEG5 Olfr1450-203ENSMUST00000213925 3075 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
Ccdc28bQ8CEG5 Olfr913-201ENSMUST00000081095 2441 ntAPPRIS P1 TSL 3 BASIC2.82□□□□□ -1.96
Ccdc28bQ8CEG5 Dppa1-202ENSMUST00000109227 551 ntAPPRIS P1 TSL 2 BASIC2.82□□□□□ -1.96
Ccdc28bQ8CEG5 Gm11221-201ENSMUST00000117230 597 ntBASIC2.82□□□□□ -1.96
Ccdc28bQ8CEG5 n-R5s192-201ENSMUST00000122577 119 ntBASIC2.82□□□□□ -1.96
Ccdc28bQ8CEG5 Gm5958-201ENSMUST00000147698 297 ntBASIC2.82□□□□□ -1.96
Ccdc28bQ8CEG5 Gm23435-201ENSMUST00000157183 156 ntBASIC2.82□□□□□ -1.96
Ccdc28bQ8CEG5 Gm23325-201ENSMUST00000157422 129 ntBASIC2.82□□□□□ -1.96
Ccdc28bQ8CEG5 Gm24008-201ENSMUST00000157733 138 ntBASIC2.82□□□□□ -1.96
Ccdc28bQ8CEG5 Klra5-204ENSMUST00000169901 792 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
Ccdc28bQ8CEG5 Gm25817-201ENSMUST00000177758 121 ntBASIC2.82□□□□□ -1.96
Ccdc28bQ8CEG5 Gm24766-201ENSMUST00000179182 121 ntBASIC2.82□□□□□ -1.96
Ccdc28bQ8CEG5 Gm25361-201ENSMUST00000179358 76 ntBASIC2.82□□□□□ -1.96
Ccdc28bQ8CEG5 Gm19641-201ENSMUST00000188432 417 ntBASIC2.82□□□□□ -1.96
Ccdc28bQ8CEG5 2810432F15Rik-201ENSMUST00000198632 657 ntTSL 5 BASIC2.82□□□□□ -1.96
Ccdc28bQ8CEG5 Igkv20-101-2-201ENSMUST00000200406 339 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
Ccdc28bQ8CEG5 Gm29848-201ENSMUST00000203107 295 ntBASIC2.82□□□□□ -1.96
Ccdc28bQ8CEG5 Gm44142-201ENSMUST00000203358 311 ntBASIC2.82□□□□□ -1.96
Ccdc28bQ8CEG5 Gm44726-201ENSMUST00000203427 217 ntBASIC2.82□□□□□ -1.96
Ccdc28bQ8CEG5 Gm19140-201ENSMUST00000209790 421 ntBASIC2.82□□□□□ -1.96
Ccdc28bQ8CEG5 Gm45438-201ENSMUST00000210242 564 ntBASIC2.82□□□□□ -1.96
Ccdc28bQ8CEG5 AC158798.1-201ENSMUST00000219714 711 ntTSL 5 BASIC2.82□□□□□ -1.96
Ccdc28bQ8CEG5 Gm10264-201ENSMUST00000220589 429 ntBASIC2.82□□□□□ -1.96
Ccdc28bQ8CEG5 Gm34408-201ENSMUST00000222104 655 ntTSL 5 BASIC2.82□□□□□ -1.96
Ccdc28bQ8CEG5 AC113031.5-201ENSMUST00000227116 606 ntBASIC2.82□□□□□ -1.96
Ccdc28bQ8CEG5 AC161572.1-201ENSMUST00000227486 640 ntBASIC2.82□□□□□ -1.96
Ccdc28bQ8CEG5 Gm25755-201ENSMUST00000083396 107 ntBASIC2.82□□□□□ -1.96
Ccdc28bQ8CEG5 Gm3867-201ENSMUST00000086108 279 ntBASIC2.82□□□□□ -1.96
Ccdc28bQ8CEG5 Csn1s1-205ENSMUST00000197631 1359 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
Ccdc28bQ8CEG5 Olfr1325-202ENSMUST00000216007 3617 ntAPPRIS ALT2 TSL 5 BASIC2.82□□□□□ -1.96
Ccdc28bQ8CEG5 Gm20172-201ENSMUST00000193138 1551 ntBASIC2.82□□□□□ -1.96
Ccdc28bQ8CEG5 Olfr355-202ENSMUST00000213574 3610 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
Ccdc28bQ8CEG5 Gm12156-201ENSMUST00000119188 554 ntBASIC2.81□□□□□ -1.96
Ccdc28bQ8CEG5 Sval2-202ENSMUST00000119995 463 ntTSL 3 BASIC2.81□□□□□ -1.96
Ccdc28bQ8CEG5 Gm23791-201ENSMUST00000122553 293 ntBASIC2.81□□□□□ -1.96
Ccdc28bQ8CEG5 Gm13686-201ENSMUST00000122851 350 ntTSL 3 BASIC2.81□□□□□ -1.96
Ccdc28bQ8CEG5 Gm13794-201ENSMUST00000148637 468 ntTSL 3 BASIC2.81□□□□□ -1.96
Ccdc28bQ8CEG5 Gm25970-201ENSMUST00000157165 86 ntBASIC2.81□□□□□ -1.96
Ccdc28bQ8CEG5 Gm22187-201ENSMUST00000157819 129 ntBASIC2.81□□□□□ -1.96
Ccdc28bQ8CEG5 Gm16572-201ENSMUST00000160258 279 ntTSL 3 BASIC2.81□□□□□ -1.96
Ccdc28bQ8CEG5 Pagr1a-201ENSMUST00000162069 422 ntTSL 3 BASIC2.81□□□□□ -1.96
Ccdc28bQ8CEG5 Gm15446-203ENSMUST00000170826 192 ntTSL 5 BASIC2.81□□□□□ -1.96
Ccdc28bQ8CEG5 Snord53-201ENSMUST00000175146 78 ntBASIC2.81□□□□□ -1.96
Ccdc28bQ8CEG5 Gm21726-201ENSMUST00000179654 392 ntBASIC2.81□□□□□ -1.96
Ccdc28bQ8CEG5 Gm26779-201ENSMUST00000181101 551 ntTSL 2 BASIC2.81□□□□□ -1.96
Ccdc28bQ8CEG5 Mir6372-201ENSMUST00000185114 109 ntBASIC2.81□□□□□ -1.96
Ccdc28bQ8CEG5 Gm28299-201ENSMUST00000189908 339 ntBASIC2.81□□□□□ -1.96
Ccdc28bQ8CEG5 Gm37281-201ENSMUST00000192412 439 ntBASIC2.81□□□□□ -1.96
Ccdc28bQ8CEG5 Gm43083-201ENSMUST00000199594 476 ntBASIC2.81□□□□□ -1.96
Ccdc28bQ8CEG5 Gm44084-201ENSMUST00000203947 409 ntBASIC2.81□□□□□ -1.96
Ccdc28bQ8CEG5 Gm5001-201ENSMUST00000204361 331 ntBASIC2.81□□□□□ -1.96
Ccdc28bQ8CEG5 Gm44208-201ENSMUST00000205199 421 ntBASIC2.81□□□□□ -1.96
Ccdc28bQ8CEG5 Gm44961-201ENSMUST00000207450 196 ntBASIC2.81□□□□□ -1.96
Ccdc28bQ8CEG5 Gm8942-201ENSMUST00000217892 400 ntBASIC2.81□□□□□ -1.96
Ccdc28bQ8CEG5 AC100590.3-201ENSMUST00000219355 332 ntTSL 5 BASIC2.81□□□□□ -1.96
Ccdc28bQ8CEG5 AC074315.1-201ENSMUST00000228801 214 ntBASIC2.81□□□□□ -1.96
Ccdc28bQ8CEG5 Vmn1r230-201ENSMUST00000053974 951 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
Ccdc28bQ8CEG5 Olfr235-201ENSMUST00000073507 1079 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
Ccdc28bQ8CEG5 Gm25853-201ENSMUST00000082793 132 ntBASIC2.81□□□□□ -1.96
Ccdc28bQ8CEG5 Gm23515-201ENSMUST00000082829 107 ntBASIC2.81□□□□□ -1.96
Ccdc28bQ8CEG5 Olfr107-202ENSMUST00000215894 2512 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
Ccdc28bQ8CEG5 Zfp638-212ENSMUST00000203891 3968 ntAPPRIS ALT2 TSL 5 BASIC2.8□□□□□ -1.96
Ccdc28bQ8CEG5 Gm44601-201ENSMUST00000206678 2720 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
Ccdc28bQ8CEG5 Gm43230-201ENSMUST00000200980 2129 ntBASIC2.8□□□□□ -1.96
Ccdc28bQ8CEG5 Olfr116-202ENSMUST00000216128 4477 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
Ccdc28bQ8CEG5 Igkv1-110-201ENSMUST00000103321 401 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
Ccdc28bQ8CEG5 Mir193b-201ENSMUST00000103784 79 ntBASIC2.8□□□□□ -1.96
Ccdc28bQ8CEG5 Spink2-203ENSMUST00000121825 643 ntAPPRIS ALT2 TSL 3 BASIC2.8□□□□□ -1.96
Ccdc28bQ8CEG5 Gm14765-201ENSMUST00000121954 326 ntBASIC2.8□□□□□ -1.96
Ccdc28bQ8CEG5 Gm12505-201ENSMUST00000146041 757 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
Ccdc28bQ8CEG5 Gm15969-201ENSMUST00000151967 236 ntTSL 3 BASIC2.8□□□□□ -1.96
Ccdc28bQ8CEG5 Gm22491-201ENSMUST00000157190 102 ntBASIC2.8□□□□□ -1.96
Ccdc28bQ8CEG5 Gm22330-201ENSMUST00000158068 115 ntBASIC2.8□□□□□ -1.96
Ccdc28bQ8CEG5 Gm16117-201ENSMUST00000160544 324 ntTSL 5 BASIC2.8□□□□□ -1.96
Ccdc28bQ8CEG5 Gm16311-201ENSMUST00000161939 702 ntTSL 3 BASIC2.8□□□□□ -1.96
Ccdc28bQ8CEG5 Gm3104-201ENSMUST00000171004 473 ntBASIC2.8□□□□□ -1.96
Ccdc28bQ8CEG5 Gm23053-201ENSMUST00000175136 96 ntBASIC2.8□□□□□ -1.96
Ccdc28bQ8CEG5 Mir3470b-201ENSMUST00000175563 126 ntBASIC2.8□□□□□ -1.96
Ccdc28bQ8CEG5 Gm20651-201ENSMUST00000177219 329 ntBASIC2.8□□□□□ -1.96
Ccdc28bQ8CEG5 Gm21638-201ENSMUST00000179473 836 ntBASIC2.8□□□□□ -1.96
Retrieved 100 of 76,532 protein–RNA pairs in 81.7 ms