Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 4930553J12Rik-202ENSMUST00000187823 851 ntBASIC3.93□□□□□ -1.78
Vps53Q8CCB4 Gm6651-201ENSMUST00000189471 271 ntBASIC3.93□□□□□ -1.78
Vps53Q8CCB4 Igkv13-80-1-201ENSMUST00000197926 255 ntBASIC3.93□□□□□ -1.78
Vps53Q8CCB4 AC160031.2-201ENSMUST00000218242 274 ntBASIC3.93□□□□□ -1.78
Vps53Q8CCB4 AC124346.1-201ENSMUST00000218539 364 ntBASIC3.93□□□□□ -1.78
Vps53Q8CCB4 Gm18921-201ENSMUST00000221798 366 ntBASIC3.93□□□□□ -1.78
Vps53Q8CCB4 AC154506.1-201ENSMUST00000225178 621 ntBASIC3.93□□□□□ -1.78
Vps53Q8CCB4 AC154390.1-201ENSMUST00000225629 277 ntBASIC3.93□□□□□ -1.78
Vps53Q8CCB4 Lelp1-201ENSMUST00000029535 857 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
Vps53Q8CCB4 Olfr1162-202ENSMUST00000183862 4800 ntAPPRIS P1 TSL 2 BASIC3.93□□□□□ -1.78
Vps53Q8CCB4 Vmn1r30-203ENSMUST00000227466 1798 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
Vps53Q8CCB4 Olfr136-202ENSMUST00000208525 2534 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
Vps53Q8CCB4 Zfp934-202ENSMUST00000101547 2147 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
Vps53Q8CCB4 Chst9-201ENSMUST00000053017 1620 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
Vps53Q8CCB4 Nlrp9a-202ENSMUST00000108387 3336 ntAPPRIS P4 TSL 1 (best) BASIC3.92□□□□□ -1.78
Vps53Q8CCB4 AC154634.4-201ENSMUST00000226077 2665 ntBASIC3.92□□□□□ -1.78
Vps53Q8CCB4 Thoc1-201ENSMUST00000025137 3855 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
Vps53Q8CCB4 AC104897.1-201ENSMUST00000222638 3628 ntBASIC3.92□□□□□ -1.78
Vps53Q8CCB4 Gm18360-201ENSMUST00000173327 1524 ntBASIC3.92□□□□□ -1.78
Vps53Q8CCB4 Gm15084-201ENSMUST00000178585 1502 ntBASIC3.92□□□□□ -1.78
Vps53Q8CCB4 B3galt2-201ENSMUST00000038252 9288 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
Vps53Q8CCB4 B020011L13Rik-201ENSMUST00000188801 2879 ntAPPRIS P1 TSL 3 BASIC3.92□□□□□ -1.78
Vps53Q8CCB4 Gm12803-201ENSMUST00000118907 821 ntBASIC3.92□□□□□ -1.78
Vps53Q8CCB4 Gm14980-201ENSMUST00000121247 736 ntBASIC3.92□□□□□ -1.78
Vps53Q8CCB4 Spink2-203ENSMUST00000121825 643 ntAPPRIS ALT2 TSL 3 BASIC3.92□□□□□ -1.78
Vps53Q8CCB4 Rab7b-203ENSMUST00000129905 476 ntTSL 2 BASIC3.92□□□□□ -1.78
Vps53Q8CCB4 Gm23169-201ENSMUST00000157157 112 ntBASIC3.92□□□□□ -1.78
Vps53Q8CCB4 Gm22216-201ENSMUST00000157557 114 ntBASIC3.92□□□□□ -1.78
Vps53Q8CCB4 Gm24876-201ENSMUST00000158780 92 ntBASIC3.92□□□□□ -1.78
Vps53Q8CCB4 Gm16038-201ENSMUST00000159317 193 ntBASIC3.92□□□□□ -1.78
Vps53Q8CCB4 Vmn1r126-201ENSMUST00000168398 966 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
Vps53Q8CCB4 Gm29231-201ENSMUST00000179850 319 ntBASIC3.92□□□□□ -1.78
Vps53Q8CCB4 Gm23003-201ENSMUST00000179948 107 ntBASIC3.92□□□□□ -1.78
Vps53Q8CCB4 Rpl31-ps7-201ENSMUST00000180629 379 ntBASIC3.92□□□□□ -1.78
Vps53Q8CCB4 Vamp4-208ENSMUST00000194810 600 ntTSL 5 BASIC3.92□□□□□ -1.78
Vps53Q8CCB4 Gm9379-201ENSMUST00000196790 646 ntBASIC3.92□□□□□ -1.78
Vps53Q8CCB4 Gm42621-201ENSMUST00000198114 275 ntBASIC3.92□□□□□ -1.78
Vps53Q8CCB4 Gm45252-201ENSMUST00000211579 397 ntBASIC3.92□□□□□ -1.78
Vps53Q8CCB4 Gm35405-201ENSMUST00000218754 400 ntBASIC3.92□□□□□ -1.78
Vps53Q8CCB4 AC166341.3-201ENSMUST00000221861 114 ntBASIC3.92□□□□□ -1.78
Vps53Q8CCB4 AC172751.1-201ENSMUST00000226887 440 ntBASIC3.92□□□□□ -1.78
Vps53Q8CCB4 S100a11-201ENSMUST00000029515 511 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
Vps53Q8CCB4 Defb11-201ENSMUST00000051965 317 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
Vps53Q8CCB4 Defb14-201ENSMUST00000052601 204 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
Vps53Q8CCB4 Olfr197-201ENSMUST00000080031 926 ntBASIC3.92□□□□□ -1.78
Vps53Q8CCB4 Rps17-201ENSMUST00000080813 494 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
Vps53Q8CCB4 Gm26107-201ENSMUST00000083972 107 ntBASIC3.92□□□□□ -1.78
Vps53Q8CCB4 Gm10666-201ENSMUST00000098722 966 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
Vps53Q8CCB4 Vmn1r114-201ENSMUST00000098737 966 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
Vps53Q8CCB4 Vmn1r93-201ENSMUST00000098747 966 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
Vps53Q8CCB4 Vmn1r178-203ENSMUST00000226489 2644 ntBASIC3.92□□□□□ -1.78
Vps53Q8CCB4 Olfr592-203ENSMUST00000218618 5978 ntTSL 5 BASIC3.92□□□□□ -1.78
Vps53Q8CCB4 Gm42585-201ENSMUST00000198731 4020 ntBASIC3.91□□□□□ -1.78
Vps53Q8CCB4 Gm22831-201ENSMUST00000102473 109 ntBASIC3.91□□□□□ -1.78
Vps53Q8CCB4 Gm14897-201ENSMUST00000118213 207 ntBASIC3.91□□□□□ -1.78
Vps53Q8CCB4 Rpl36a-ps3-201ENSMUST00000120093 321 ntBASIC3.91□□□□□ -1.78
Vps53Q8CCB4 Gm14919-201ENSMUST00000120839 390 ntBASIC3.91□□□□□ -1.78
Vps53Q8CCB4 Gm22956-201ENSMUST00000122520 80 ntBASIC3.91□□□□□ -1.78
Vps53Q8CCB4 Ssxb6-201ENSMUST00000138642 518 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
Vps53Q8CCB4 Gm22085-201ENSMUST00000158344 110 ntBASIC3.91□□□□□ -1.78
Vps53Q8CCB4 Vmn2r-ps70-201ENSMUST00000174636 302 ntBASIC3.91□□□□□ -1.78
Vps53Q8CCB4 Vmn1r-ps68-201ENSMUST00000174638 399 ntBASIC3.91□□□□□ -1.78
Vps53Q8CCB4 Gm20681-201ENSMUST00000176061 503 ntTSL 2 BASIC3.91□□□□□ -1.78
Vps53Q8CCB4 Gm23793-201ENSMUST00000179396 117 ntBASIC3.91□□□□□ -1.78
Vps53Q8CCB4 Gm28008-201ENSMUST00000184021 186 ntBASIC3.91□□□□□ -1.78
Vps53Q8CCB4 Gm29064-201ENSMUST00000187014 813 ntBASIC3.91□□□□□ -1.78
Vps53Q8CCB4 Ighv12-1-201ENSMUST00000195542 329 ntBASIC3.91□□□□□ -1.78
Vps53Q8CCB4 Gm34091-201ENSMUST00000200875 604 ntBASIC3.91□□□□□ -1.78
Vps53Q8CCB4 Gm36406-202ENSMUST00000203761 551 ntTSL 5 BASIC3.91□□□□□ -1.78
Vps53Q8CCB4 CT030247.1-201ENSMUST00000216810 267 ntBASIC3.91□□□□□ -1.78
Vps53Q8CCB4 AC122905.2-201ENSMUST00000220325 269 ntBASIC3.91□□□□□ -1.78
Vps53Q8CCB4 Sval1-201ENSMUST00000031898 615 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
Vps53Q8CCB4 Gm24045-201ENSMUST00000083113 98 ntBASIC3.91□□□□□ -1.78
Vps53Q8CCB4 Olfr561-201ENSMUST00000098217 1071 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
Vps53Q8CCB4 Olfr1033-202ENSMUST00000213865 3664 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Vps53Q8CCB4 Olfr839-ps1-201ENSMUST00000212127 7759 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Vps53Q8CCB4 Dst-201ENSMUST00000097785 23251 ntAPPRIS P4 TSL 1 (best) BASIC3.9□□□□□ -1.78
Vps53Q8CCB4 Vmn1r79-203ENSMUST00000227530 5581 ntAPPRIS P1 BASIC3.9□□□□□ -1.78
Vps53Q8CCB4 Gm7135-202ENSMUST00000191257 1905 ntBASIC3.9□□□□□ -1.78
Vps53Q8CCB4 Tfpi-203ENSMUST00000111711 3968 ntTSL 5 BASIC3.9□□□□□ -1.79
Vps53Q8CCB4 Btf3l4-201ENSMUST00000102739 723 ntAPPRIS P1 TSL 3 BASIC3.9□□□□□ -1.79
Vps53Q8CCB4 Igkv9-124-201ENSMUST00000103312 287 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Vps53Q8CCB4 Rpl31-ps5-201ENSMUST00000118086 375 ntBASIC3.9□□□□□ -1.79
Vps53Q8CCB4 Gm15037-201ENSMUST00000120358 259 ntBASIC3.9□□□□□ -1.79
Vps53Q8CCB4 Gm8880-201ENSMUST00000121800 454 ntBASIC3.9□□□□□ -1.79
Vps53Q8CCB4 Gm12150-201ENSMUST00000130874 468 ntTSL 3 BASIC3.9□□□□□ -1.79
Vps53Q8CCB4 A630050E04Rik-201ENSMUST00000151443 581 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Vps53Q8CCB4 Gm25490-201ENSMUST00000158734 130 ntBASIC3.9□□□□□ -1.79
Vps53Q8CCB4 Mir5127-201ENSMUST00000175295 71 ntBASIC3.9□□□□□ -1.79
Vps53Q8CCB4 Gm25671-201ENSMUST00000178612 105 ntBASIC3.9□□□□□ -1.79
Vps53Q8CCB4 Gm23307-201ENSMUST00000179167 105 ntBASIC3.9□□□□□ -1.79
Vps53Q8CCB4 Gm25286-201ENSMUST00000179790 105 ntBASIC3.9□□□□□ -1.79
Vps53Q8CCB4 Gm38167-201ENSMUST00000195704 1178 ntBASIC3.9□□□□□ -1.79
Vps53Q8CCB4 Gm43115-201ENSMUST00000196244 160 ntBASIC3.9□□□□□ -1.79
Vps53Q8CCB4 Gm44391-201ENSMUST00000198490 93 ntBASIC3.9□□□□□ -1.79
Vps53Q8CCB4 Gm7652-201ENSMUST00000200440 1151 ntBASIC3.9□□□□□ -1.79
Vps53Q8CCB4 Gm39147-201ENSMUST00000211376 465 ntBASIC3.9□□□□□ -1.79
Vps53Q8CCB4 AC132437.1-201ENSMUST00000218308 320 ntBASIC3.9□□□□□ -1.79
Vps53Q8CCB4 AC153887.2-201ENSMUST00000219160 3838 ntBASIC3.9□□□□□ -1.79
Vps53Q8CCB4 AC142499.1-201ENSMUST00000220036 374 ntBASIC3.9□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 110.2 ms