Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 Snora7a-201ENSMUST00000082629 140 ntBASIC3.64□□□□□ -1.83
Trerf1Q8BXJ2 Gm20557-201ENSMUST00000192871 2794 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
Trerf1Q8BXJ2 Glra2-201ENSMUST00000058787 3150 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Trerf1Q8BXJ2 Vmn1r211-202ENSMUST00000228645 5447 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Trerf1Q8BXJ2 Gm38031-201ENSMUST00000191819 3015 ntBASIC3.64□□□□□ -1.83
Trerf1Q8BXJ2 Olfr609-202ENSMUST00000216075 3429 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Trerf1Q8BXJ2 E430014B02Rik-201ENSMUST00000194215 3156 ntBASIC3.63□□□□□ -1.83
Trerf1Q8BXJ2 Olfr1446-203ENSMUST00000216805 2417 ntAPPRIS P1 TSL 3 BASIC3.63□□□□□ -1.83
Trerf1Q8BXJ2 Gm38388-201ENSMUST00000195569 1430 ntBASIC3.63□□□□□ -1.83
Trerf1Q8BXJ2 Olfr389-201ENSMUST00000122224 3057 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
Trerf1Q8BXJ2 Vmn1r42-203ENSMUST00000227279 4138 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Trerf1Q8BXJ2 Gm25316-201ENSMUST00000116826 118 ntBASIC3.63□□□□□ -1.83
Trerf1Q8BXJ2 Gm14647-201ENSMUST00000119392 680 ntBASIC3.63□□□□□ -1.83
Trerf1Q8BXJ2 Gm14564-201ENSMUST00000122159 294 ntBASIC3.63□□□□□ -1.83
Trerf1Q8BXJ2 Gm11479-201ENSMUST00000134275 387 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
Trerf1Q8BXJ2 Mir5127-201ENSMUST00000175295 71 ntBASIC3.63□□□□□ -1.83
Trerf1Q8BXJ2 Olfr1187-ps1-201ENSMUST00000177576 334 ntBASIC3.63□□□□□ -1.83
Trerf1Q8BXJ2 Vmn2r-ps18-201ENSMUST00000177972 380 ntBASIC3.63□□□□□ -1.83
Trerf1Q8BXJ2 Gm8532-201ENSMUST00000179174 461 ntBASIC3.63□□□□□ -1.83
Trerf1Q8BXJ2 Gm23523-201ENSMUST00000180190 107 ntBASIC3.63□□□□□ -1.83
Trerf1Q8BXJ2 Gm27640-201ENSMUST00000184580 147 ntBASIC3.63□□□□□ -1.83
Trerf1Q8BXJ2 Gm29139-201ENSMUST00000185794 248 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
Trerf1Q8BXJ2 Gm37575-201ENSMUST00000195467 309 ntBASIC3.63□□□□□ -1.83
Trerf1Q8BXJ2 Zfp813-ps-202ENSMUST00000204773 618 ntTSL 5 BASIC3.63□□□□□ -1.83
Trerf1Q8BXJ2 Gm44633-201ENSMUST00000205925 439 ntTSL 3 BASIC3.63□□□□□ -1.83
Trerf1Q8BXJ2 Vmn2r-ps50-201ENSMUST00000209317 120 ntBASIC3.63□□□□□ -1.83
Trerf1Q8BXJ2 AC122905.2-201ENSMUST00000220325 269 ntBASIC3.63□□□□□ -1.83
Trerf1Q8BXJ2 Gm20102-201ENSMUST00000222445 220 ntBASIC3.63□□□□□ -1.83
Trerf1Q8BXJ2 Gm23627-201ENSMUST00000082459 107 ntBASIC3.63□□□□□ -1.83
Trerf1Q8BXJ2 Gm22502-201ENSMUST00000082488 107 ntBASIC3.63□□□□□ -1.83
Trerf1Q8BXJ2 Gm22061-201ENSMUST00000082557 107 ntBASIC3.63□□□□□ -1.83
Trerf1Q8BXJ2 Gm24149-201ENSMUST00000082757 107 ntBASIC3.63□□□□□ -1.83
Trerf1Q8BXJ2 Gm26056-201ENSMUST00000083043 104 ntBASIC3.63□□□□□ -1.83
Trerf1Q8BXJ2 Mir323-201ENSMUST00000083683 86 ntBASIC3.63□□□□□ -1.83
Trerf1Q8BXJ2 Gm23851-201ENSMUST00000083831 103 ntBASIC3.63□□□□□ -1.83
Trerf1Q8BXJ2 Btbd35f3-201ENSMUST00000140300 1943 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Trerf1Q8BXJ2 Olfr389-202ENSMUST00000124927 2781 ntAPPRIS P1 TSL 3 BASIC3.63□□□□□ -1.83
Trerf1Q8BXJ2 Olfr125-202ENSMUST00000213857 3835 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Trerf1Q8BXJ2 Vmn1r22-202ENSMUST00000227650 3674 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
Trerf1Q8BXJ2 Olfr681-205ENSMUST00000216247 4729 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Trerf1Q8BXJ2 Olfr160-201ENSMUST00000104875 930 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
Trerf1Q8BXJ2 Gm13439-201ENSMUST00000117541 409 ntBASIC3.62□□□□□ -1.83
Trerf1Q8BXJ2 Gm15807-201ENSMUST00000119880 1128 ntBASIC3.62□□□□□ -1.83
Trerf1Q8BXJ2 Gm11785-201ENSMUST00000120165 601 ntBASIC3.62□□□□□ -1.83
Trerf1Q8BXJ2 Gm15799-201ENSMUST00000120899 289 ntBASIC3.62□□□□□ -1.83
Trerf1Q8BXJ2 Mup-ps20-201ENSMUST00000121132 389 ntBASIC3.62□□□□□ -1.83
Trerf1Q8BXJ2 Gm14845-201ENSMUST00000121259 306 ntBASIC3.62□□□□□ -1.83
Trerf1Q8BXJ2 Gm12872-201ENSMUST00000121835 320 ntBASIC3.62□□□□□ -1.83
Trerf1Q8BXJ2 Gm14821-201ENSMUST00000121975 435 ntBASIC3.62□□□□□ -1.83
Trerf1Q8BXJ2 Gm25781-201ENSMUST00000122527 84 ntBASIC3.62□□□□□ -1.83
Trerf1Q8BXJ2 Gm28058-201ENSMUST00000186421 264 ntBASIC3.62□□□□□ -1.83
Trerf1Q8BXJ2 Gm37743-201ENSMUST00000194645 376 ntBASIC3.62□□□□□ -1.83
Trerf1Q8BXJ2 4930511M18Rik-201ENSMUST00000197811 679 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
Trerf1Q8BXJ2 Olfr515-ps1-201ENSMUST00000208389 189 ntBASIC3.62□□□□□ -1.83
Trerf1Q8BXJ2 Gm18854-201ENSMUST00000211196 329 ntBASIC3.62□□□□□ -1.83
Trerf1Q8BXJ2 Olfr1035-ps1-202ENSMUST00000213364 288 ntTSL 5 BASIC3.62□□□□□ -1.83
Trerf1Q8BXJ2 AC124346.1-201ENSMUST00000218539 364 ntBASIC3.62□□□□□ -1.83
Trerf1Q8BXJ2 AC091783.5-201ENSMUST00000224928 671 ntBASIC3.62□□□□□ -1.83
Trerf1Q8BXJ2 Gm9772-201ENSMUST00000075018 408 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Trerf1Q8BXJ2 Gm26446-201ENSMUST00000082455 103 ntBASIC3.62□□□□□ -1.83
Trerf1Q8BXJ2 Gm24045-201ENSMUST00000083113 98 ntBASIC3.62□□□□□ -1.83
Trerf1Q8BXJ2 Gm31592-201ENSMUST00000217529 3471 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
Trerf1Q8BXJ2 Vmn2r-ps104-201ENSMUST00000099416 1671 ntTSL 5 BASIC3.62□□□□□ -1.83
Trerf1Q8BXJ2 Gm9009-201ENSMUST00000117321 326 ntBASIC3.61□□□□□ -1.83
Trerf1Q8BXJ2 Gm14687-201ENSMUST00000120206 363 ntBASIC3.61□□□□□ -1.83
Trerf1Q8BXJ2 Gm11384-201ENSMUST00000121376 303 ntBASIC3.61□□□□□ -1.83
Trerf1Q8BXJ2 Gm22034-201ENSMUST00000157283 134 ntBASIC3.61□□□□□ -1.83
Trerf1Q8BXJ2 Gm25572-201ENSMUST00000157527 172 ntBASIC3.61□□□□□ -1.83
Trerf1Q8BXJ2 Gm24780-201ENSMUST00000157635 143 ntBASIC3.61□□□□□ -1.83
Trerf1Q8BXJ2 Gm23666-201ENSMUST00000158053 116 ntBASIC3.61□□□□□ -1.83
Trerf1Q8BXJ2 Gm24552-201ENSMUST00000158646 103 ntBASIC3.61□□□□□ -1.83
Trerf1Q8BXJ2 Snord92-201ENSMUST00000175548 85 ntBASIC3.61□□□□□ -1.83
Trerf1Q8BXJ2 Gm21797-201ENSMUST00000177579 543 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Trerf1Q8BXJ2 Gm21767-201ENSMUST00000178689 543 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Trerf1Q8BXJ2 Gm21822-201ENSMUST00000179302 543 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Trerf1Q8BXJ2 Ptma-ps1-201ENSMUST00000181079 309 ntBASIC3.61□□□□□ -1.83
Trerf1Q8BXJ2 Gm28030-201ENSMUST00000184987 138 ntBASIC3.61□□□□□ -1.83
Trerf1Q8BXJ2 Hmgb1-rs16-201ENSMUST00000185927 613 ntBASIC3.61□□□□□ -1.83
Trerf1Q8BXJ2 Gm17966-201ENSMUST00000193453 594 ntBASIC3.61□□□□□ -1.83
Trerf1Q8BXJ2 Igkv8-31-201ENSMUST00000200040 372 ntBASIC3.61□□□□□ -1.83
Trerf1Q8BXJ2 Gm43500-201ENSMUST00000201067 312 ntTSL 5 BASIC3.61□□□□□ -1.83
Trerf1Q8BXJ2 Gm43039-201ENSMUST00000202883 963 ntBASIC3.61□□□□□ -1.83
Trerf1Q8BXJ2 Gm45375-201ENSMUST00000210338 280 ntBASIC3.61□□□□□ -1.83
Trerf1Q8BXJ2 Gm45380-201ENSMUST00000210465 315 ntBASIC3.61□□□□□ -1.83
Trerf1Q8BXJ2 Gm45252-201ENSMUST00000211579 397 ntBASIC3.61□□□□□ -1.83
Trerf1Q8BXJ2 AC160550.3-201ENSMUST00000226818 400 ntBASIC3.61□□□□□ -1.83
Trerf1Q8BXJ2 Gm23925-201ENSMUST00000082471 132 ntBASIC3.61□□□□□ -1.83
Trerf1Q8BXJ2 Olfr895-201ENSMUST00000093864 951 ntBASIC3.61□□□□□ -1.83
Trerf1Q8BXJ2 Olr1-201ENSMUST00000032265 3572 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
Trerf1Q8BXJ2 Gm42446-201ENSMUST00000199783 3284 ntBASIC3.61□□□□□ -1.83
Trerf1Q8BXJ2 Olfr609-203ENSMUST00000216360 3295 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Trerf1Q8BXJ2 Olfr713-202ENSMUST00000213623 6329 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Trerf1Q8BXJ2 Gm19965-201ENSMUST00000179777 3030 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Trerf1Q8BXJ2 Vmn1r172-202ENSMUST00000173101 9109 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Trerf1Q8BXJ2 Gm14387-201ENSMUST00000121827 2055 ntBASIC3.61□□□□□ -1.83
Trerf1Q8BXJ2 Gm44925-201ENSMUST00000208879 2110 ntBASIC3.61□□□□□ -1.83
Trerf1Q8BXJ2 Olfr346-202ENSMUST00000213258 4104 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Trerf1Q8BXJ2 Gm45039-201ENSMUST00000209181 3477 ntBASIC3.6□□□□□ -1.83
Trerf1Q8BXJ2 Nexn-211ENSMUST00000199423 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
Trerf1Q8BXJ2 Gm40020-201ENSMUST00000215677 1635 ntBASIC3.6□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 98.2 ms