Protein–RNA interactions for Protein: Q69ZI1

Sh3rf1, E3 ubiquitin-protein ligase SH3RF1, mousemouse

Predictions only

Length 892 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1Q69ZI1 Gm29169-201ENSMUST00000189835 615 ntBASIC4.31□□□□□ -1.72
Sh3rf1Q69ZI1 Gm37713-201ENSMUST00000191746 198 ntBASIC4.31□□□□□ -1.72
Sh3rf1Q69ZI1 Ighv1-32-201ENSMUST00000195149 351 ntBASIC4.31□□□□□ -1.72
Sh3rf1Q69ZI1 Gm9402-201ENSMUST00000196849 388 ntBASIC4.31□□□□□ -1.72
Sh3rf1Q69ZI1 Gm44324-201ENSMUST00000198517 135 ntBASIC4.31□□□□□ -1.72
Sh3rf1Q69ZI1 Gm43441-201ENSMUST00000201458 205 ntBASIC4.31□□□□□ -1.72
Sh3rf1Q69ZI1 AC120555.1-201ENSMUST00000221020 222 ntTSL 5 BASIC4.31□□□□□ -1.72
Sh3rf1Q69ZI1 Vmn1r80-204ENSMUST00000227471 6368 ntBASIC4.31□□□□□ -1.72
Sh3rf1Q69ZI1 Gm22297-201ENSMUST00000083312 106 ntBASIC4.31□□□□□ -1.72
Sh3rf1Q69ZI1 Gm10491-201ENSMUST00000085330 117 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Sh3rf1Q69ZI1 Neto2-201ENSMUST00000109686 5610 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Sh3rf1Q69ZI1 Gm27162-201ENSMUST00000185169 2478 ntTSL 2 BASIC4.31□□□□□ -1.72
Sh3rf1Q69ZI1 Olfr1197-202ENSMUST00000213118 2899 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Sh3rf1Q69ZI1 Btbd35f10-201ENSMUST00000178621 1952 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Sh3rf1Q69ZI1 Gm43705-201ENSMUST00000195958 3717 ntBASIC4.31□□□□□ -1.72
Sh3rf1Q69ZI1 2610002M06Rik-201ENSMUST00000120722 5842 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Sh3rf1Q69ZI1 Cntn3-201ENSMUST00000032159 5183 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
Sh3rf1Q69ZI1 Olfr1185-ps1-201ENSMUST00000075025 3344 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Sh3rf1Q69ZI1 Fam111a-201ENSMUST00000025595 3267 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
Sh3rf1Q69ZI1 Olfr1331-202ENSMUST00000106360 3230 ntAPPRIS P2 TSL 5 BASIC4.3□□□□□ -1.72
Sh3rf1Q69ZI1 1700008H02Rik-201ENSMUST00000201220 1684 ntBASIC4.3□□□□□ -1.72
Sh3rf1Q69ZI1 Gm26500-201ENSMUST00000101867 106 ntBASIC4.3□□□□□ -1.72
Sh3rf1Q69ZI1 Gm22472-201ENSMUST00000104115 134 ntBASIC4.3□□□□□ -1.72
Sh3rf1Q69ZI1 Rpl30-ps10-201ENSMUST00000117119 347 ntBASIC4.3□□□□□ -1.72
Sh3rf1Q69ZI1 Gm13714-201ENSMUST00000117313 221 ntBASIC4.3□□□□□ -1.72
Sh3rf1Q69ZI1 Rpl30-ps3-201ENSMUST00000117928 348 ntBASIC4.3□□□□□ -1.72
Sh3rf1Q69ZI1 Gm12191-201ENSMUST00000118307 348 ntBASIC4.3□□□□□ -1.72
Sh3rf1Q69ZI1 Gm9703-201ENSMUST00000119573 343 ntBASIC4.3□□□□□ -1.72
Sh3rf1Q69ZI1 Rpl30-ps11-201ENSMUST00000119630 345 ntBASIC4.3□□□□□ -1.72
Sh3rf1Q69ZI1 Rpl30-ps1-201ENSMUST00000119767 348 ntBASIC4.3□□□□□ -1.72
Sh3rf1Q69ZI1 Gm24481-201ENSMUST00000157210 102 ntBASIC4.3□□□□□ -1.72
Sh3rf1Q69ZI1 Gm24392-201ENSMUST00000158136 103 ntBASIC4.3□□□□□ -1.72
Sh3rf1Q69ZI1 Gm22766-201ENSMUST00000158372 99 ntBASIC4.3□□□□□ -1.72
Sh3rf1Q69ZI1 Gm24667-201ENSMUST00000158938 103 ntBASIC4.3□□□□□ -1.72
Sh3rf1Q69ZI1 Ifi206-202ENSMUST00000169797 429 ntTSL 5 BASIC4.3□□□□□ -1.72
Sh3rf1Q69ZI1 Gm17133-201ENSMUST00000170636 289 ntTSL 3 BASIC4.3□□□□□ -1.72
Sh3rf1Q69ZI1 Gm23638-201ENSMUST00000175073 126 ntBASIC4.3□□□□□ -1.72
Sh3rf1Q69ZI1 Gm23158-201ENSMUST00000175076 126 ntBASIC4.3□□□□□ -1.72
Sh3rf1Q69ZI1 Gm22907-201ENSMUST00000175198 126 ntBASIC4.3□□□□□ -1.72
Sh3rf1Q69ZI1 Gm22625-201ENSMUST00000175382 126 ntBASIC4.3□□□□□ -1.72
Sh3rf1Q69ZI1 Gm22875-201ENSMUST00000175449 126 ntBASIC4.3□□□□□ -1.72
Sh3rf1Q69ZI1 Gm25197-201ENSMUST00000175516 126 ntBASIC4.3□□□□□ -1.72
Sh3rf1Q69ZI1 Gm27857-201ENSMUST00000176930 126 ntBASIC4.3□□□□□ -1.72
Sh3rf1Q69ZI1 Gm26268-201ENSMUST00000177685 126 ntBASIC4.3□□□□□ -1.72
Sh3rf1Q69ZI1 Gm23681-201ENSMUST00000178821 126 ntBASIC4.3□□□□□ -1.72
Sh3rf1Q69ZI1 Gm27245-201ENSMUST00000184385 376 ntBASIC4.3□□□□□ -1.72
Sh3rf1Q69ZI1 Gm28959-201ENSMUST00000186713 551 ntTSL 5 BASIC4.3□□□□□ -1.72
Sh3rf1Q69ZI1 1700010I02Rik-202ENSMUST00000188525 430 ntTSL 3 BASIC4.3□□□□□ -1.72
Sh3rf1Q69ZI1 Gm17916-203ENSMUST00000189918 324 ntTSL 5 BASIC4.3□□□□□ -1.72
Sh3rf1Q69ZI1 Gm29865-201ENSMUST00000197726 451 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Sh3rf1Q69ZI1 Hcfc1r1-ps2-201ENSMUST00000199379 339 ntBASIC4.3□□□□□ -1.72
Sh3rf1Q69ZI1 Gm31717-201ENSMUST00000213044 668 ntTSL 5 BASIC4.3□□□□□ -1.72
Sh3rf1Q69ZI1 Gm39380-201ENSMUST00000214710 192 ntTSL 5 BASIC4.3□□□□□ -1.72
Sh3rf1Q69ZI1 AC123618.1-201ENSMUST00000220174 360 ntBASIC4.3□□□□□ -1.72
Sh3rf1Q69ZI1 AC174459.2-201ENSMUST00000226036 160 ntBASIC4.3□□□□□ -1.72
Sh3rf1Q69ZI1 AC124182.1-201ENSMUST00000227091 321 ntBASIC4.3□□□□□ -1.72
Sh3rf1Q69ZI1 Rpl30-ps8-201ENSMUST00000076166 345 ntBASIC4.3□□□□□ -1.72
Sh3rf1Q69ZI1 Gm10343-201ENSMUST00000096279 348 ntBASIC4.3□□□□□ -1.72
Sh3rf1Q69ZI1 Gm7381-201ENSMUST00000098958 300 ntBASIC4.3□□□□□ -1.72
Sh3rf1Q69ZI1 Sorbs2-203ENSMUST00000124544 3798 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Sh3rf1Q69ZI1 Zfp595-203ENSMUST00000168892 4040 ntAPPRIS P2 TSL 1 (best) BASIC4.3□□□□□ -1.72
Sh3rf1Q69ZI1 Gm17976-201ENSMUST00000184037 1909 ntBASIC4.3□□□□□ -1.72
Sh3rf1Q69ZI1 Casp12-201ENSMUST00000027009 2649 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Sh3rf1Q69ZI1 Gm28154-201ENSMUST00000186267 4218 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Sh3rf1Q69ZI1 4930467D21Rik-201ENSMUST00000180634 2530 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Sh3rf1Q69ZI1 Olfr112-204ENSMUST00000208832 3173 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Sh3rf1Q69ZI1 AC167420.1-201ENSMUST00000222999 2121 ntBASIC4.3□□□□□ -1.72
Sh3rf1Q69ZI1 Gm43327-201ENSMUST00000199285 4055 ntBASIC4.3□□□□□ -1.72
Sh3rf1Q69ZI1 Cdh7-209ENSMUST00000172005 3353 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Sh3rf1Q69ZI1 AC126673.1-201ENSMUST00000223208 3856 ntBASIC4.29□□□□□ -1.72
Sh3rf1Q69ZI1 9330158H04Rik-201ENSMUST00000101535 3174 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Sh3rf1Q69ZI1 Gm26853-201ENSMUST00000180757 4010 ntTSL 5 BASIC4.29□□□□□ -1.72
Sh3rf1Q69ZI1 Gm8978-201ENSMUST00000124230 2224 ntTSL 5 BASIC4.29□□□□□ -1.72
Sh3rf1Q69ZI1 Pde1a-206ENSMUST00000102655 4258 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Sh3rf1Q69ZI1 Olfr38-202ENSMUST00000215796 2782 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Sh3rf1Q69ZI1 Gm24951-201ENSMUST00000102182 109 ntBASIC4.29□□□□□ -1.72
Sh3rf1Q69ZI1 Gm23322-201ENSMUST00000104464 167 ntBASIC4.29□□□□□ -1.72
Sh3rf1Q69ZI1 Gm23178-201ENSMUST00000116782 95 ntBASIC4.29□□□□□ -1.72
Sh3rf1Q69ZI1 Gm7308-201ENSMUST00000121087 447 ntBASIC4.29□□□□□ -1.72
Sh3rf1Q69ZI1 Gm13092-201ENSMUST00000136346 260 ntBASIC4.29□□□□□ -1.72
Sh3rf1Q69ZI1 Gm25054-201ENSMUST00000157370 97 ntBASIC4.29□□□□□ -1.72
Sh3rf1Q69ZI1 Gm23781-201ENSMUST00000157940 308 ntBASIC4.29□□□□□ -1.72
Sh3rf1Q69ZI1 Gm25015-201ENSMUST00000158400 128 ntBASIC4.29□□□□□ -1.72
Sh3rf1Q69ZI1 Gm23571-201ENSMUST00000180073 127 ntBASIC4.29□□□□□ -1.72
Sh3rf1Q69ZI1 2310001H17Rik-201ENSMUST00000180379 521 ntTSL 2 BASIC4.29□□□□□ -1.72
Sh3rf1Q69ZI1 Gm27940-201ENSMUST00000184449 98 ntBASIC4.29□□□□□ -1.72
Sh3rf1Q69ZI1 Gm28849-201ENSMUST00000188127 174 ntBASIC4.29□□□□□ -1.72
Sh3rf1Q69ZI1 Gm28330-201ENSMUST00000190353 171 ntBASIC4.29□□□□□ -1.72
Sh3rf1Q69ZI1 Gm6796-201ENSMUST00000211919 243 ntBASIC4.29□□□□□ -1.72
Sh3rf1Q69ZI1 Calml4-203ENSMUST00000213643 710 ntTSL 2 BASIC4.29□□□□□ -1.72
Sh3rf1Q69ZI1 Gm35101-201ENSMUST00000219218 243 ntTSL 5 BASIC4.29□□□□□ -1.72
Sh3rf1Q69ZI1 Gm29774-201ENSMUST00000219270 436 ntBASIC4.29□□□□□ -1.72
Sh3rf1Q69ZI1 AC138401.1-201ENSMUST00000221533 116 ntBASIC4.29□□□□□ -1.72
Sh3rf1Q69ZI1 Mup1-201ENSMUST00000084548 776 ntAPPRIS ALT2 TSL 3 BASIC4.29□□□□□ -1.72
Sh3rf1Q69ZI1 Gm10813-201ENSMUST00000099936 90 ntBASIC4.29□□□□□ -1.72
Sh3rf1Q69ZI1 Gm36951-201ENSMUST00000193840 2687 ntBASIC4.29□□□□□ -1.72
Sh3rf1Q69ZI1 AC152162.1-201ENSMUST00000225910 2917 ntBASIC4.29□□□□□ -1.72
Sh3rf1Q69ZI1 Ifi203-203ENSMUST00000123708 3482 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
Sh3rf1Q69ZI1 Olfr1129-202ENSMUST00000213315 2255 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
Sh3rf1Q69ZI1 Hfm1-201ENSMUST00000112690 5018 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 85.9 ms