Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Gm44988-201ENSMUST00000203835 1161 ntBASIC2.16□□□□□ -2.06
Six4Q61321 Vmn2r-ps99-201ENSMUST00000221276 1203 ntTSL 5 BASIC2.16□□□□□ -2.06
Six4Q61321 n-R5s79-201ENSMUST00000083071 120 ntBASIC2.16□□□□□ -2.06
Six4Q61321 Gm13212-201ENSMUST00000097794 1221 ntTSL 5 BASIC2.16□□□□□ -2.06
Six4Q61321 Gm1980-201ENSMUST00000123131 2306 ntBASIC2.16□□□□□ -2.06
Six4Q61321 Olfr1029-202ENSMUST00000217244 3743 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.06
Six4Q61321 Gm6923-201ENSMUST00000118343 406 ntBASIC2.15□□□□□ -2.07
Six4Q61321 Gm13406-201ENSMUST00000121991 256 ntBASIC2.15□□□□□ -2.07
Six4Q61321 Gm26348-201ENSMUST00000157528 240 ntBASIC2.15□□□□□ -2.07
Six4Q61321 Gm25637-201ENSMUST00000157529 107 ntBASIC2.15□□□□□ -2.07
Six4Q61321 Agmo-205ENSMUST00000160768 741 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
Six4Q61321 Gm8292-201ENSMUST00000162574 396 ntBASIC2.15□□□□□ -2.07
Six4Q61321 Mir3092-201ENSMUST00000174954 96 ntBASIC2.15□□□□□ -2.07
Six4Q61321 Mir5118-201ENSMUST00000175551 67 ntBASIC2.15□□□□□ -2.07
Six4Q61321 Gm29322-201ENSMUST00000185378 582 ntTSL 5 BASIC2.15□□□□□ -2.07
Six4Q61321 Gm20915-201ENSMUST00000191575 663 ntBASIC2.15□□□□□ -2.07
Six4Q61321 Igkv12-49-201ENSMUST00000197714 278 ntBASIC2.15□□□□□ -2.07
Six4Q61321 Gm30275-202ENSMUST00000198124 416 ntTSL 3 BASIC2.15□□□□□ -2.07
Six4Q61321 AC154296.1-201ENSMUST00000198150 67 ntBASIC2.15□□□□□ -2.07
Six4Q61321 Gm5317-201ENSMUST00000204445 847 ntBASIC2.15□□□□□ -2.07
Six4Q61321 Gm45013-201ENSMUST00000206883 178 ntBASIC2.15□□□□□ -2.07
Six4Q61321 AC111044.1-201ENSMUST00000220206 555 ntTSL 5 BASIC2.15□□□□□ -2.07
Six4Q61321 AC122393.3-201ENSMUST00000226343 1059 ntBASIC2.15□□□□□ -2.07
Six4Q61321 Snora69-201ENSMUST00000083708 131 ntBASIC2.15□□□□□ -2.07
Six4Q61321 Gm17969-201ENSMUST00000185706 2557 ntBASIC2.15□□□□□ -2.07
Six4Q61321 Esp34-201ENSMUST00000173055 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC2.15□□□□□ -2.07
Six4Q61321 Esp34-202ENSMUST00000178654 1413 ntAPPRIS P2 TSL 1 (best) BASIC2.15□□□□□ -2.07
Six4Q61321 Gm4224-201ENSMUST00000211557 1594 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
Six4Q61321 Olfr807-203ENSMUST00000217106 1788 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
Six4Q61321 Gm7173-202ENSMUST00000114021 1083 ntAPPRIS ALT2 TSL 5 BASIC2.14□□□□□ -2.07
Six4Q61321 Cyp4b1-ps1-201ENSMUST00000118753 315 ntBASIC2.14□□□□□ -2.07
Six4Q61321 Gm12871-201ENSMUST00000118758 438 ntBASIC2.14□□□□□ -2.07
Six4Q61321 Gm11384-201ENSMUST00000121376 303 ntBASIC2.14□□□□□ -2.07
Six4Q61321 Gm8080-201ENSMUST00000122046 1155 ntBASIC2.14□□□□□ -2.07
Six4Q61321 Gm14271-201ENSMUST00000137886 630 ntTSL 3 BASIC2.14□□□□□ -2.07
Six4Q61321 Klra17-201ENSMUST00000014687 1190 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
Six4Q61321 Gm23137-201ENSMUST00000157559 107 ntBASIC2.14□□□□□ -2.07
Six4Q61321 Gm24237-201ENSMUST00000157790 132 ntBASIC2.14□□□□□ -2.07
Six4Q61321 Mir1927-201ENSMUST00000158579 109 ntBASIC2.14□□□□□ -2.07
Six4Q61321 Vmn1r-ps85-201ENSMUST00000173029 890 ntBASIC2.14□□□□□ -2.07
Six4Q61321 Rpl31-ps15-201ENSMUST00000181857 375 ntBASIC2.14□□□□□ -2.07
Six4Q61321 Gm29263-201ENSMUST00000188718 463 ntBASIC2.14□□□□□ -2.07
Six4Q61321 Gm28384-201ENSMUST00000189079 463 ntBASIC2.14□□□□□ -2.07
Six4Q61321 Gm44256-201ENSMUST00000203304 335 ntBASIC2.14□□□□□ -2.07
Six4Q61321 Olfr1468-ps1-201ENSMUST00000207287 1208 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
Six4Q61321 Gm44554-201ENSMUST00000208738 147 ntBASIC2.14□□□□□ -2.07
Six4Q61321 Gm45791-201ENSMUST00000212908 352 ntBASIC2.14□□□□□ -2.07
Six4Q61321 Olfr1461-201ENSMUST00000053772 939 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
Six4Q61321 Gm24044-201ENSMUST00000083107 156 ntBASIC2.14□□□□□ -2.07
Six4Q61321 Mir423-201ENSMUST00000083584 109 ntBASIC2.14□□□□□ -2.07
Six4Q61321 Gm23733-201ENSMUST00000083750 106 ntBASIC2.14□□□□□ -2.07
Six4Q61321 Gm24698-201ENSMUST00000083883 130 ntBASIC2.14□□□□□ -2.07
Six4Q61321 Olfr1101-201ENSMUST00000099870 933 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
Six4Q61321 Gm37598-201ENSMUST00000194506 1301 ntBASIC2.14□□□□□ -2.07
Six4Q61321 Gm37761-201ENSMUST00000194989 2098 ntBASIC2.13□□□□□ -2.07
Six4Q61321 Trbv5-201ENSMUST00000103266 368 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
Six4Q61321 Mir883a-201ENSMUST00000104824 76 ntBASIC2.13□□□□□ -2.07
Six4Q61321 Gm12935-201ENSMUST00000119352 246 ntBASIC2.13□□□□□ -2.07
Six4Q61321 Gm14128-201ENSMUST00000119514 1011 ntBASIC2.13□□□□□ -2.07
Six4Q61321 Gm12721-201ENSMUST00000120621 268 ntBASIC2.13□□□□□ -2.07
Six4Q61321 Gm13200-201ENSMUST00000138802 258 ntTSL 3 BASIC2.13□□□□□ -2.07
Six4Q61321 Gm26275-201ENSMUST00000157101 268 ntBASIC2.13□□□□□ -2.07
Six4Q61321 Gm24358-201ENSMUST00000158424 288 ntBASIC2.13□□□□□ -2.07
Six4Q61321 Gm17162-201ENSMUST00000168538 473 ntBASIC2.13□□□□□ -2.07
Six4Q61321 Gm10717-206ENSMUST00000177875 675 ntTSL 5 BASIC2.13□□□□□ -2.07
Six4Q61321 Gm10717-208ENSMUST00000179839 681 ntTSL 5 BASIC2.13□□□□□ -2.07
Six4Q61321 Gm10717-209ENSMUST00000179982 681 ntTSL 5 BASIC2.13□□□□□ -2.07
Six4Q61321 Gm21798-201ENSMUST00000180105 261 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
Six4Q61321 1700063O14Rik-201ENSMUST00000187067 492 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
Six4Q61321 Gm28412-201ENSMUST00000187243 177 ntBASIC2.13□□□□□ -2.07
Six4Q61321 Gm37557-201ENSMUST00000191640 139 ntBASIC2.13□□□□□ -2.07
Six4Q61321 Gm37692-201ENSMUST00000192633 232 ntBASIC2.13□□□□□ -2.07
Six4Q61321 Gm37062-201ENSMUST00000195028 701 ntTSL 5 BASIC2.13□□□□□ -2.07
Six4Q61321 Gm44395-201ENSMUST00000197056 153 ntBASIC2.13□□□□□ -2.07
Six4Q61321 AC155715.1-201ENSMUST00000213575 463 ntBASIC2.13□□□□□ -2.07
Six4Q61321 Gm35190-201ENSMUST00000222335 526 ntTSL 3 BASIC2.13□□□□□ -2.07
Six4Q61321 Olfr823-201ENSMUST00000081469 948 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
Six4Q61321 Gm25796-201ENSMUST00000082645 163 ntBASIC2.13□□□□□ -2.07
Six4Q61321 Gm22866-201ENSMUST00000083947 177 ntBASIC2.13□□□□□ -2.07
Six4Q61321 Gm10203-201ENSMUST00000087348 198 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
Six4Q61321 Gm10717-204ENSMUST00000099056 669 ntTSL 5 BASIC2.13□□□□□ -2.07
Six4Q61321 Gm20172-201ENSMUST00000193138 1551 ntBASIC2.13□□□□□ -2.07
Six4Q61321 Ifi203-209ENSMUST00000156895 3605 ntAPPRIS ALT2 TSL 1 (best) BASIC2.12□□□□□ -2.07
Six4Q61321 Gm26154-201ENSMUST00000102339 96 ntBASIC2.12□□□□□ -2.07
Six4Q61321 Ighv9-3-201ENSMUST00000103473 351 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
Six4Q61321 Gm23551-201ENSMUST00000116852 121 ntBASIC2.12□□□□□ -2.07
Six4Q61321 Gm12386-201ENSMUST00000117380 688 ntBASIC2.12□□□□□ -2.07
Six4Q61321 Gm12656-201ENSMUST00000118149 577 ntBASIC2.12□□□□□ -2.07
Six4Q61321 Mup-ps14-201ENSMUST00000118437 532 ntBASIC2.12□□□□□ -2.07
Six4Q61321 Gm14867-201ENSMUST00000120156 866 ntBASIC2.12□□□□□ -2.07
Six4Q61321 Gm16412-201ENSMUST00000121602 273 ntBASIC2.12□□□□□ -2.07
Six4Q61321 Mup-ps2-201ENSMUST00000142602 533 ntBASIC2.12□□□□□ -2.07
Six4Q61321 Gm25334-201ENSMUST00000158036 110 ntBASIC2.12□□□□□ -2.07
Six4Q61321 Gm10177-202ENSMUST00000161698 207 ntBASIC2.12□□□□□ -2.07
Six4Q61321 Gm25707-201ENSMUST00000175120 96 ntBASIC2.12□□□□□ -2.07
Six4Q61321 Gm20794-201ENSMUST00000177626 628 ntBASIC2.12□□□□□ -2.07
Six4Q61321 Gm21095-201ENSMUST00000177775 498 ntTSL 5 BASIC2.12□□□□□ -2.07
Six4Q61321 Gm21858-201ENSMUST00000177834 498 ntTSL 5 BASIC2.12□□□□□ -2.07
Six4Q61321 Gm20916-201ENSMUST00000178063 498 ntTSL 5 BASIC2.12□□□□□ -2.07
Six4Q61321 Gm21760-201ENSMUST00000179811 498 ntTSL 5 BASIC2.12□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 91.2 ms