Protein–RNA interactions for Protein: Q5SNZ0

Ccdc88a, Girdin, mousemouse

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88aQ5SNZ0 AC117232.1-201ENSMUST00000197964 119 ntBASIC2□□□□□ -2.09
Ccdc88aQ5SNZ0 Igkv13-61-1-201ENSMUST00000198255 296 ntBASIC2□□□□□ -2.09
Ccdc88aQ5SNZ0 Gm43431-201ENSMUST00000198577 340 ntBASIC2□□□□□ -2.09
Ccdc88aQ5SNZ0 Gm44656-201ENSMUST00000208428 490 ntBASIC2□□□□□ -2.09
Ccdc88aQ5SNZ0 Gm45341-201ENSMUST00000210850 1104 ntTSL 5 BASIC2□□□□□ -2.09
Ccdc88aQ5SNZ0 Olfr728-201ENSMUST00000051563 936 ntAPPRIS P1 BASIC2□□□□□ -2.09
Ccdc88aQ5SNZ0 Defb39-201ENSMUST00000075504 252 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
Ccdc88aQ5SNZ0 Gm23628-201ENSMUST00000082464 173 ntBASIC2□□□□□ -2.09
Ccdc88aQ5SNZ0 Mir423-201ENSMUST00000083584 109 ntBASIC2□□□□□ -2.09
Ccdc88aQ5SNZ0 Gm10780-201ENSMUST00000099459 285 ntBASIC2□□□□□ -2.09
Ccdc88aQ5SNZ0 Gm33962-201ENSMUST00000182643 2592 ntBASIC1.99□□□□□ -2.09
Ccdc88aQ5SNZ0 Csn1s2b-202ENSMUST00000101057 1668 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
Ccdc88aQ5SNZ0 Gm12697-201ENSMUST00000118008 667 ntBASIC1.99□□□□□ -2.09
Ccdc88aQ5SNZ0 Gm23760-201ENSMUST00000158350 116 ntBASIC1.99□□□□□ -2.09
Ccdc88aQ5SNZ0 Gm8532-201ENSMUST00000179174 461 ntBASIC1.99□□□□□ -2.09
Ccdc88aQ5SNZ0 Gm29009-201ENSMUST00000186340 496 ntTSL 5 BASIC1.99□□□□□ -2.09
Ccdc88aQ5SNZ0 Gm44520-201ENSMUST00000205447 802 ntBASIC1.99□□□□□ -2.09
Ccdc88aQ5SNZ0 Gm44634-201ENSMUST00000206119 152 ntBASIC1.99□□□□□ -2.09
Ccdc88aQ5SNZ0 Gm9373-201ENSMUST00000208724 599 ntBASIC1.99□□□□□ -2.09
Ccdc88aQ5SNZ0 Gm45273-201ENSMUST00000211559 281 ntBASIC1.99□□□□□ -2.09
Ccdc88aQ5SNZ0 Fcf1-201ENSMUST00000021669 749 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
Ccdc88aQ5SNZ0 Gm5471-201ENSMUST00000072732 337 ntBASIC1.99□□□□□ -2.09
Ccdc88aQ5SNZ0 n-R5s197-201ENSMUST00000083302 119 ntBASIC1.99□□□□□ -2.09
Ccdc88aQ5SNZ0 Gm23096-201ENSMUST00000083447 107 ntBASIC1.99□□□□□ -2.09
Ccdc88aQ5SNZ0 Gm11356-201ENSMUST00000118974 192 ntBASIC1.99□□□□□ -2.09
Ccdc88aQ5SNZ0 Gm14271-201ENSMUST00000137886 630 ntTSL 3 BASIC1.99□□□□□ -2.09
Ccdc88aQ5SNZ0 Gm25044-201ENSMUST00000158603 104 ntBASIC1.99□□□□□ -2.09
Ccdc88aQ5SNZ0 Gm17064-201ENSMUST00000167690 452 ntBASIC1.99□□□□□ -2.09
Ccdc88aQ5SNZ0 Obox4-ps3-201ENSMUST00000183474 520 ntBASIC1.99□□□□□ -2.09
Ccdc88aQ5SNZ0 Mir6995-201ENSMUST00000183658 71 ntBASIC1.99□□□□□ -2.09
Ccdc88aQ5SNZ0 Gm18433-201ENSMUST00000192747 197 ntBASIC1.99□□□□□ -2.09
Ccdc88aQ5SNZ0 Gm37979-201ENSMUST00000193065 712 ntBASIC1.99□□□□□ -2.09
Ccdc88aQ5SNZ0 Gm44137-201ENSMUST00000203670 367 ntBASIC1.99□□□□□ -2.09
Ccdc88aQ5SNZ0 Gm45912-201ENSMUST00000210646 543 ntBASIC1.99□□□□□ -2.09
Ccdc88aQ5SNZ0 Olfr850-202ENSMUST00000211832 947 ntAPPRIS ALT2 BASIC1.99□□□□□ -2.09
Ccdc88aQ5SNZ0 Gm35262-201ENSMUST00000215133 267 ntBASIC1.99□□□□□ -2.09
Ccdc88aQ5SNZ0 AC153646.1-201ENSMUST00000223229 1279 ntBASIC1.99□□□□□ -2.09
Ccdc88aQ5SNZ0 AC154692.1-201ENSMUST00000228314 544 ntBASIC1.99□□□□□ -2.09
Ccdc88aQ5SNZ0 Olfr204-201ENSMUST00000072517 918 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
Ccdc88aQ5SNZ0 Mir200b-201ENSMUST00000083615 70 ntBASIC1.99□□□□□ -2.09
Ccdc88aQ5SNZ0 Vmn1r3-201ENSMUST00000105159 1011 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
Ccdc88aQ5SNZ0 Gm29740-201ENSMUST00000193182 655 ntBASIC1.98□□□□□ -2.09
Ccdc88aQ5SNZ0 Gm37523-201ENSMUST00000194901 412 ntBASIC1.98□□□□□ -2.09
Ccdc88aQ5SNZ0 Gm43193-201ENSMUST00000197732 441 ntBASIC1.98□□□□□ -2.09
Ccdc88aQ5SNZ0 Gm35570-201ENSMUST00000198730 681 ntBASIC1.98□□□□□ -2.09
Ccdc88aQ5SNZ0 Olfr165-203ENSMUST00000206410 1040 ntAPPRIS P2 BASIC1.98□□□□□ -2.09
Ccdc88aQ5SNZ0 Gm20304-201ENSMUST00000218168 444 ntBASIC1.98□□□□□ -2.09
Ccdc88aQ5SNZ0 CT030159.4-201ENSMUST00000221966 395 ntBASIC1.98□□□□□ -2.09
Ccdc88aQ5SNZ0 CT025157.1-201ENSMUST00000226241 292 ntBASIC1.98□□□□□ -2.09
Ccdc88aQ5SNZ0 AC121960.3-201ENSMUST00000227077 623 ntBASIC1.98□□□□□ -2.09
Ccdc88aQ5SNZ0 Olfr165-201ENSMUST00000052516 1040 ntAPPRIS ALT1 BASIC1.98□□□□□ -2.09
Ccdc88aQ5SNZ0 Mucl1-201ENSMUST00000078842 621 ntAPPRIS ALT2 BASIC1.98□□□□□ -2.09
Ccdc88aQ5SNZ0 Gm22353-201ENSMUST00000083918 136 ntBASIC1.98□□□□□ -2.09
Ccdc88aQ5SNZ0 Vmn1r178-202ENSMUST00000226450 2880 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
Ccdc88aQ5SNZ0 Gm13231-201ENSMUST00000119218 2850 ntBASIC1.97□□□□□ -2.09
Ccdc88aQ5SNZ0 Gm5937-201ENSMUST00000119715 643 ntBASIC1.97□□□□□ -2.09
Ccdc88aQ5SNZ0 Gm15112-201ENSMUST00000120152 860 ntBASIC1.97□□□□□ -2.09
Ccdc88aQ5SNZ0 Gm11438-201ENSMUST00000121582 189 ntBASIC1.97□□□□□ -2.09
Ccdc88aQ5SNZ0 Gm12706-201ENSMUST00000121588 698 ntBASIC1.97□□□□□ -2.09
Ccdc88aQ5SNZ0 Vmn1r-ps62-201ENSMUST00000173275 910 ntBASIC1.97□□□□□ -2.09
Ccdc88aQ5SNZ0 Mir5099-201ENSMUST00000175257 74 ntBASIC1.97□□□□□ -2.09
Ccdc88aQ5SNZ0 Gm21954-201ENSMUST00000179544 51 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
Ccdc88aQ5SNZ0 Mir7021-201ENSMUST00000197026 63 ntBASIC1.97□□□□□ -2.09
Ccdc88aQ5SNZ0 Rpl26-ps1-201ENSMUST00000213139 426 ntBASIC1.97□□□□□ -2.09
Ccdc88aQ5SNZ0 Gm21089-201ENSMUST00000215843 325 ntBASIC1.97□□□□□ -2.09
Ccdc88aQ5SNZ0 AC174797.4-201ENSMUST00000225510 347 ntBASIC1.97□□□□□ -2.09
Ccdc88aQ5SNZ0 Gm26128-201ENSMUST00000083170 110 ntBASIC1.97□□□□□ -2.09
Ccdc88aQ5SNZ0 Cyp3a44-201ENSMUST00000067479 1962 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
Ccdc88aQ5SNZ0 Olfr1183-201ENSMUST00000102618 912 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
Ccdc88aQ5SNZ0 Gm10999-201ENSMUST00000108743 207 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
Ccdc88aQ5SNZ0 Gm14363-201ENSMUST00000122304 409 ntBASIC1.97□□□□□ -2.09
Ccdc88aQ5SNZ0 Gm9632-201ENSMUST00000195934 643 ntBASIC1.97□□□□□ -2.09
Ccdc88aQ5SNZ0 Gm40040-202ENSMUST00000196337 305 ntTSL 3 BASIC1.97□□□□□ -2.09
Ccdc88aQ5SNZ0 Olfr1463-202ENSMUST00000207246 2315 ntAPPRIS P1 TSL 2 BASIC1.97□□□□□ -2.09
Ccdc88aQ5SNZ0 Gm18598-201ENSMUST00000207724 597 ntBASIC1.97□□□□□ -2.09
Ccdc88aQ5SNZ0 Gm35309-201ENSMUST00000208337 478 ntTSL 3 BASIC1.97□□□□□ -2.09
Ccdc88aQ5SNZ0 AC154276.2-201ENSMUST00000227707 309 ntBASIC1.97□□□□□ -2.09
Ccdc88aQ5SNZ0 Gm24261-201ENSMUST00000083744 104 ntBASIC1.97□□□□□ -2.09
Ccdc88aQ5SNZ0 Sult3a1-201ENSMUST00000092597 1047 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
Ccdc88aQ5SNZ0 Olfr1141-201ENSMUST00000099846 936 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
Ccdc88aQ5SNZ0 Gm37598-201ENSMUST00000194506 1301 ntBASIC1.96□□□□□ -2.1
Ccdc88aQ5SNZ0 Gm15314-201ENSMUST00000120740 1887 ntBASIC1.96□□□□□ -2.1
Ccdc88aQ5SNZ0 Gm14442-201ENSMUST00000119690 1736 ntBASIC1.96□□□□□ -2.1
Ccdc88aQ5SNZ0 Cpxcr1-201ENSMUST00000101269 1596 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
Ccdc88aQ5SNZ0 Gm25526-201ENSMUST00000104332 132 ntBASIC1.96□□□□□ -2.1
Ccdc88aQ5SNZ0 Mir1192-201ENSMUST00000116976 121 ntBASIC1.96□□□□□ -2.1
Ccdc88aQ5SNZ0 Gm14940-201ENSMUST00000119309 495 ntBASIC1.96□□□□□ -2.1
Ccdc88aQ5SNZ0 Gm22957-201ENSMUST00000122511 123 ntBASIC1.96□□□□□ -2.1
Ccdc88aQ5SNZ0 Gm15279-201ENSMUST00000155593 288 ntBASIC1.96□□□□□ -2.1
Ccdc88aQ5SNZ0 Gm23813-201ENSMUST00000175153 77 ntBASIC1.96□□□□□ -2.1
Ccdc88aQ5SNZ0 Gm27869-201ENSMUST00000184327 122 ntBASIC1.96□□□□□ -2.1
Ccdc88aQ5SNZ0 Gm28449-201ENSMUST00000187655 506 ntTSL 3 BASIC1.96□□□□□ -2.1
Ccdc88aQ5SNZ0 Gm43043-201ENSMUST00000196579 412 ntBASIC1.96□□□□□ -2.1
Ccdc88aQ5SNZ0 Gm19089-201ENSMUST00000197207 613 ntBASIC1.96□□□□□ -2.1
Ccdc88aQ5SNZ0 Gm3442-201ENSMUST00000216808 710 ntBASIC1.96□□□□□ -2.1
Ccdc88aQ5SNZ0 Olfr1324-203ENSMUST00000219631 1152 ntAPPRIS P2 BASIC1.96□□□□□ -2.1
Ccdc88aQ5SNZ0 Platr25-208ENSMUST00000222602 939 ntBASIC1.96□□□□□ -2.1
Ccdc88aQ5SNZ0 Olfr1324-201ENSMUST00000050044 1152 ntAPPRIS ALT2 BASIC1.96□□□□□ -2.1
Ccdc88aQ5SNZ0 Mir320-201ENSMUST00000083594 82 ntBASIC1.96□□□□□ -2.1
Ccdc88aQ5SNZ0 Olfr893-201ENSMUST00000093867 942 ntAPPRIS P2 BASIC1.96□□□□□ -2.1
Retrieved 100 of 76,532 protein–RNA pairs in 101.6 ms