Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Catsperb-201ENSMUST00000055156 3716 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
Trav5d-4Q5R1F6 Olfr1448-203ENSMUST00000213713 4336 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
Trav5d-4Q5R1F6 Trbv5-201ENSMUST00000103266 368 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
Trav5d-4Q5R1F6 Gm14292-201ENSMUST00000118761 456 ntBASIC1.58□□□□□ -2.16
Trav5d-4Q5R1F6 Gm12934-201ENSMUST00000119221 343 ntBASIC1.58□□□□□ -2.16
Trav5d-4Q5R1F6 Gm15067-201ENSMUST00000119534 156 ntBASIC1.58□□□□□ -2.16
Trav5d-4Q5R1F6 Gm15281-201ENSMUST00000125181 351 ntBASIC1.58□□□□□ -2.16
Trav5d-4Q5R1F6 Klra17-201ENSMUST00000014687 1190 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
Trav5d-4Q5R1F6 Gm26349-201ENSMUST00000157530 130 ntBASIC1.58□□□□□ -2.16
Trav5d-4Q5R1F6 Gm25335-201ENSMUST00000158043 103 ntBASIC1.58□□□□□ -2.16
Trav5d-4Q5R1F6 Gm25051-201ENSMUST00000158602 249 ntBASIC1.58□□□□□ -2.16
Trav5d-4Q5R1F6 Gm23548-201ENSMUST00000158963 106 ntBASIC1.58□□□□□ -2.16
Trav5d-4Q5R1F6 Gm25707-201ENSMUST00000175120 96 ntBASIC1.58□□□□□ -2.16
Trav5d-4Q5R1F6 Gm22392-201ENSMUST00000177971 107 ntBASIC1.58□□□□□ -2.16
Trav5d-4Q5R1F6 Igkv1-136-201ENSMUST00000200635 297 ntBASIC1.58□□□□□ -2.16
Trav5d-4Q5R1F6 Gm16351-202ENSMUST00000209660 337 ntTSL 5 BASIC1.58□□□□□ -2.16
Trav5d-4Q5R1F6 Gm18039-201ENSMUST00000217816 728 ntBASIC1.58□□□□□ -2.16
Trav5d-4Q5R1F6 Sult3a2-202ENSMUST00000223295 930 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
Trav5d-4Q5R1F6 Olfr951-201ENSMUST00000078531 945 ntAPPRIS P2 BASIC1.58□□□□□ -2.16
Trav5d-4Q5R1F6 Gm23727-201ENSMUST00000083352 164 ntBASIC1.58□□□□□ -2.16
Trav5d-4Q5R1F6 Tas2r140-201ENSMUST00000095391 1000 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
Trav5d-4Q5R1F6 Olfr948-202ENSMUST00000216132 4164 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
Trav5d-4Q5R1F6 Olfr389-203ENSMUST00000215418 3417 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
Trav5d-4Q5R1F6 Gm43046-201ENSMUST00000198771 2451 ntBASIC1.57□□□□□ -2.16
Trav5d-4Q5R1F6 Gm22494-201ENSMUST00000104495 128 ntBASIC1.57□□□□□ -2.16
Trav5d-4Q5R1F6 Gm7164-201ENSMUST00000117503 450 ntBASIC1.57□□□□□ -2.16
Trav5d-4Q5R1F6 Gm14669-201ENSMUST00000118841 250 ntBASIC1.57□□□□□ -2.16
Trav5d-4Q5R1F6 Trav20-201ENSMUST00000142754 347 ntBASIC1.57□□□□□ -2.16
Trav5d-4Q5R1F6 Gm25637-201ENSMUST00000157529 107 ntBASIC1.57□□□□□ -2.16
Trav5d-4Q5R1F6 Gm25658-201ENSMUST00000158472 128 ntBASIC1.57□□□□□ -2.16
Trav5d-4Q5R1F6 Gm24770-201ENSMUST00000158505 92 ntBASIC1.57□□□□□ -2.16
Trav5d-4Q5R1F6 Gm16584-201ENSMUST00000159267 189 ntBASIC1.57□□□□□ -2.16
Trav5d-4Q5R1F6 Gm17119-201ENSMUST00000163943 280 ntBASIC1.57□□□□□ -2.16
Trav5d-4Q5R1F6 Vmn1r77-201ENSMUST00000164446 921 ntAPPRIS P2 BASIC1.57□□□□□ -2.16
Trav5d-4Q5R1F6 Gm17162-201ENSMUST00000168538 473 ntBASIC1.57□□□□□ -2.16
Trav5d-4Q5R1F6 Vmn2r-ps126-201ENSMUST00000176711 1149 ntBASIC1.57□□□□□ -2.16
Trav5d-4Q5R1F6 Scgb2b14-ps-201ENSMUST00000189424 336 ntBASIC1.57□□□□□ -2.16
Trav5d-4Q5R1F6 Gm38039-201ENSMUST00000195328 443 ntTSL 5 BASIC1.57□□□□□ -2.16
Trav5d-4Q5R1F6 Mir7021-201ENSMUST00000197026 63 ntBASIC1.57□□□□□ -2.16
Trav5d-4Q5R1F6 Gm34701-202ENSMUST00000204685 360 ntBASIC1.57□□□□□ -2.16
Trav5d-4Q5R1F6 Gm44794-201ENSMUST00000206550 411 ntBASIC1.57□□□□□ -2.16
Trav5d-4Q5R1F6 Gm44844-201ENSMUST00000207242 336 ntBASIC1.57□□□□□ -2.16
Trav5d-4Q5R1F6 D730003K21Rik-201ENSMUST00000215052 589 ntTSL 2 BASIC1.57□□□□□ -2.16
Trav5d-4Q5R1F6 AL929285.1-201ENSMUST00000215522 229 ntBASIC1.57□□□□□ -2.16
Trav5d-4Q5R1F6 Olfr1233-204ENSMUST00000216561 1192 ntAPPRIS P1 TSL 5 BASIC1.57□□□□□ -2.16
Trav5d-4Q5R1F6 Gm7214-201ENSMUST00000222428 272 ntBASIC1.57□□□□□ -2.16
Trav5d-4Q5R1F6 AC144628.2-201ENSMUST00000227374 352 ntBASIC1.57□□□□□ -2.16
Trav5d-4Q5R1F6 Olfr1459-201ENSMUST00000078299 1102 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
Trav5d-4Q5R1F6 Gm25813-201ENSMUST00000082748 191 ntBASIC1.57□□□□□ -2.16
Trav5d-4Q5R1F6 Olfr1052-203ENSMUST00000217166 1694 ntAPPRIS P1 TSL 5 BASIC1.57□□□□□ -2.16
Trav5d-4Q5R1F6 Olfr629-202ENSMUST00000213906 2548 ntAPPRIS P1 TSL 5 BASIC1.57□□□□□ -2.16
Trav5d-4Q5R1F6 Cox20-ps-201ENSMUST00000119872 353 ntBASIC1.56□□□□□ -2.16
Trav5d-4Q5R1F6 Gm13239-201ENSMUST00000119920 637 ntBASIC1.56□□□□□ -2.16
Trav5d-4Q5R1F6 Gm14254-201ENSMUST00000136371 296 ntTSL 5 BASIC1.56□□□□□ -2.16
Trav5d-4Q5R1F6 Gm15243-201ENSMUST00000151101 382 ntTSL 2 BASIC1.56□□□□□ -2.16
Trav5d-4Q5R1F6 Gm22227-201ENSMUST00000157356 259 ntBASIC1.56□□□□□ -2.16
Trav5d-4Q5R1F6 Tcrg-C3-201ENSMUST00000164407 519 ntAPPRIS ALT2 TSL 1 (best) BASIC1.56□□□□□ -2.16
Trav5d-4Q5R1F6 Vmn1r-ps68-201ENSMUST00000174638 399 ntBASIC1.56□□□□□ -2.16
Trav5d-4Q5R1F6 Mir8106-201ENSMUST00000184520 139 ntBASIC1.56□□□□□ -2.16
Trav5d-4Q5R1F6 Gm37692-201ENSMUST00000192633 232 ntBASIC1.56□□□□□ -2.16
Trav5d-4Q5R1F6 Gm30275-202ENSMUST00000198124 416 ntTSL 3 BASIC1.56□□□□□ -2.16
Trav5d-4Q5R1F6 Gm19457-201ENSMUST00000200995 448 ntBASIC1.56□□□□□ -2.16
Trav5d-4Q5R1F6 Gm44181-201ENSMUST00000203106 483 ntBASIC1.56□□□□□ -2.16
Trav5d-4Q5R1F6 Gm44212-201ENSMUST00000205016 897 ntBASIC1.56□□□□□ -2.16
Trav5d-4Q5R1F6 Gm8940-201ENSMUST00000212585 219 ntBASIC1.56□□□□□ -2.16
Trav5d-4Q5R1F6 AC166060.1-201ENSMUST00000213509 425 ntTSL 5 BASIC1.56□□□□□ -2.16
Trav5d-4Q5R1F6 AC164567.2-201ENSMUST00000219363 445 ntBASIC1.56□□□□□ -2.16
Trav5d-4Q5R1F6 AC166358.6-201ENSMUST00000221834 1206 ntBASIC1.56□□□□□ -2.16
Trav5d-4Q5R1F6 AC113031.4-201ENSMUST00000228381 514 ntBASIC1.56□□□□□ -2.16
Trav5d-4Q5R1F6 Olfr802-201ENSMUST00000074713 939 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
Trav5d-4Q5R1F6 Gm26128-201ENSMUST00000083170 110 ntBASIC1.56□□□□□ -2.16
Trav5d-4Q5R1F6 Mir322-201ENSMUST00000083484 95 ntBASIC1.56□□□□□ -2.16
Trav5d-4Q5R1F6 Gm14327-201ENSMUST00000099001 192 ntTSL 5 BASIC1.56□□□□□ -2.16
Trav5d-4Q5R1F6 Il1rapl1-202ENSMUST00000113964 1936 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
Trav5d-4Q5R1F6 Gm45262-201ENSMUST00000209917 1463 ntBASIC1.56□□□□□ -2.16
Trav5d-4Q5R1F6 Slc7a12-202ENSMUST00000120484 1010 ntTSL 5 BASIC1.55□□□□□ -2.16
Trav5d-4Q5R1F6 Gm26256-201ENSMUST00000122499 186 ntBASIC1.55□□□□□ -2.16
Trav5d-4Q5R1F6 Gm24908-201ENSMUST00000157294 127 ntBASIC1.55□□□□□ -2.16
Trav5d-4Q5R1F6 U6.1-201ENSMUST00000157443 101 ntBASIC1.55□□□□□ -2.16
Trav5d-4Q5R1F6 Gm24773-201ENSMUST00000158513 99 ntBASIC1.55□□□□□ -2.16
Trav5d-4Q5R1F6 Gm26195-201ENSMUST00000175035 101 ntBASIC1.55□□□□□ -2.16
Trav5d-4Q5R1F6 Gm24656-201ENSMUST00000177548 132 ntBASIC1.55□□□□□ -2.16
Trav5d-4Q5R1F6 Gm22264-201ENSMUST00000178200 107 ntBASIC1.55□□□□□ -2.16
Trav5d-4Q5R1F6 Gm26713-201ENSMUST00000181827 627 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
Trav5d-4Q5R1F6 Mir6376-201ENSMUST00000185149 131 ntBASIC1.55□□□□□ -2.16
Trav5d-4Q5R1F6 Ighv1-46-201ENSMUST00000193988 351 ntBASIC1.55□□□□□ -2.16
Trav5d-4Q5R1F6 Gm44459-201ENSMUST00000203926 160 ntBASIC1.55□□□□□ -2.16
Trav5d-4Q5R1F6 4930402F11Rik-202ENSMUST00000207781 1178 ntTSL 5 BASIC1.55□□□□□ -2.16
Trav5d-4Q5R1F6 Gm45530-201ENSMUST00000211658 225 ntBASIC1.55□□□□□ -2.16
Trav5d-4Q5R1F6 Gm35101-201ENSMUST00000219218 243 ntTSL 5 BASIC1.55□□□□□ -2.16
Trav5d-4Q5R1F6 AC159632.1-201ENSMUST00000221808 317 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
Trav5d-4Q5R1F6 Cenpk-201ENSMUST00000022227 1217 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
Trav5d-4Q5R1F6 AC183092.2-201ENSMUST00000225542 1153 ntBASIC1.55□□□□□ -2.16
Trav5d-4Q5R1F6 AC133517.1-203ENSMUST00000225570 390 ntBASIC1.55□□□□□ -2.16
Trav5d-4Q5R1F6 Zfp706-205ENSMUST00000228275 481 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
Trav5d-4Q5R1F6 Pmch-201ENSMUST00000048621 749 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
Trav5d-4Q5R1F6 Olfr952-201ENSMUST00000073895 1056 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
Trav5d-4Q5R1F6 Skint11-201ENSMUST00000079915 820 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
Trav5d-4Q5R1F6 Gm22683-201ENSMUST00000082854 137 ntBASIC1.55□□□□□ -2.16
Trav5d-4Q5R1F6 Gm45461-201ENSMUST00000211726 4535 ntBASIC1.55□□□□□ -2.16
Retrieved 100 of 76,532 protein–RNA pairs in 83.8 ms