Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Ccdc7b-201ENSMUST00000026912 1447 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
Trav3-3Q5R1C3 Gm25466-201ENSMUST00000103995 132 ntBASIC1.84□□□□□ -2.11
Trav3-3Q5R1C3 Gimap4-204ENSMUST00000119575 900 ntTSL 3 BASIC1.84□□□□□ -2.11
Trav3-3Q5R1C3 Gm16428-201ENSMUST00000121193 723 ntBASIC1.84□□□□□ -2.11
Trav3-3Q5R1C3 Zfp950-205ENSMUST00000148569 192 ntTSL 5 BASIC1.84□□□□□ -2.11
Trav3-3Q5R1C3 Gm26280-201ENSMUST00000157096 101 ntBASIC1.84□□□□□ -2.11
Trav3-3Q5R1C3 Gm16232-201ENSMUST00000162856 167 ntBASIC1.84□□□□□ -2.11
Trav3-3Q5R1C3 Vmn1r139-201ENSMUST00000169730 894 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
Trav3-3Q5R1C3 Spanxn4-201ENSMUST00000172433 424 ntBASIC1.84□□□□□ -2.11
Trav3-3Q5R1C3 Vmn1r-ps85-201ENSMUST00000173029 890 ntBASIC1.84□□□□□ -2.11
Trav3-3Q5R1C3 Vmn1r112-201ENSMUST00000174538 894 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
Trav3-3Q5R1C3 Gm23813-201ENSMUST00000175153 77 ntBASIC1.84□□□□□ -2.11
Trav3-3Q5R1C3 Vmn2r-ps33-201ENSMUST00000175691 904 ntBASIC1.84□□□□□ -2.11
Trav3-3Q5R1C3 Vmn1r157-201ENSMUST00000178215 894 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
Trav3-3Q5R1C3 Gm24713-201ENSMUST00000178850 107 ntBASIC1.84□□□□□ -2.11
Trav3-3Q5R1C3 Gm25448-201ENSMUST00000180065 107 ntBASIC1.84□□□□□ -2.11
Trav3-3Q5R1C3 Gm28000-201ENSMUST00000184380 85 ntBASIC1.84□□□□□ -2.11
Trav3-3Q5R1C3 Gm19193-201ENSMUST00000190263 590 ntBASIC1.84□□□□□ -2.11
Trav3-3Q5R1C3 Gm37119-201ENSMUST00000195691 389 ntBASIC1.84□□□□□ -2.11
Trav3-3Q5R1C3 Gm42716-203ENSMUST00000197140 259 ntTSL 3 BASIC1.84□□□□□ -2.11
Trav3-3Q5R1C3 Gm43804-201ENSMUST00000198280 456 ntBASIC1.84□□□□□ -2.11
Trav3-3Q5R1C3 Gm43217-201ENSMUST00000199513 367 ntBASIC1.84□□□□□ -2.11
Trav3-3Q5R1C3 Gm45355-201ENSMUST00000211342 296 ntTSL 3 BASIC1.84□□□□□ -2.11
Trav3-3Q5R1C3 AC069074.2-201ENSMUST00000217819 428 ntBASIC1.84□□□□□ -2.11
Trav3-3Q5R1C3 Gm24474-201ENSMUST00000220504 469 ntTSL 2 BASIC1.84□□□□□ -2.11
Trav3-3Q5R1C3 CR974485.1-201ENSMUST00000222408 402 ntBASIC1.84□□□□□ -2.11
Trav3-3Q5R1C3 AC115289.1-201ENSMUST00000224915 522 ntBASIC1.84□□□□□ -2.11
Trav3-3Q5R1C3 Vmn1r132-201ENSMUST00000098736 894 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
Trav3-3Q5R1C3 Zfy2-201ENSMUST00000115891 2816 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
Trav3-3Q5R1C3 Olfr844-202ENSMUST00000220268 1686 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
Trav3-3Q5R1C3 Gm13212-202ENSMUST00000105739 3595 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
Trav3-3Q5R1C3 AC162910.1-201ENSMUST00000221219 1723 ntBASIC1.83□□□□□ -2.12
Trav3-3Q5R1C3 Gm25500-201ENSMUST00000104426 123 ntBASIC1.83□□□□□ -2.12
Trav3-3Q5R1C3 Gm11065-201ENSMUST00000111462 228 ntBASIC1.83□□□□□ -2.12
Trav3-3Q5R1C3 Gm15167-201ENSMUST00000121997 187 ntBASIC1.83□□□□□ -2.12
Trav3-3Q5R1C3 Gm12755-201ENSMUST00000122297 282 ntBASIC1.83□□□□□ -2.12
Trav3-3Q5R1C3 Gm13266-201ENSMUST00000141869 579 ntTSL 2 BASIC1.83□□□□□ -2.12
Trav3-3Q5R1C3 Gm24879-201ENSMUST00000158386 143 ntBASIC1.83□□□□□ -2.12
Trav3-3Q5R1C3 Gm24553-201ENSMUST00000158653 131 ntBASIC1.83□□□□□ -2.12
Trav3-3Q5R1C3 Gm16004-201ENSMUST00000161981 311 ntTSL 5 BASIC1.83□□□□□ -2.12
Trav3-3Q5R1C3 Vmn1r77-201ENSMUST00000164446 921 ntAPPRIS P2 BASIC1.83□□□□□ -2.12
Trav3-3Q5R1C3 Obox1-203ENSMUST00000172881 821 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
Trav3-3Q5R1C3 Gm27753-201ENSMUST00000184742 203 ntBASIC1.83□□□□□ -2.12
Trav3-3Q5R1C3 Mir6975-201ENSMUST00000184879 61 ntBASIC1.83□□□□□ -2.12
Trav3-3Q5R1C3 Mir7028-201ENSMUST00000185016 64 ntBASIC1.83□□□□□ -2.12
Trav3-3Q5R1C3 Gm28627-201ENSMUST00000186141 453 ntBASIC1.83□□□□□ -2.12
Trav3-3Q5R1C3 Gm43540-201ENSMUST00000196320 3848 ntBASIC1.83□□□□□ -2.12
Trav3-3Q5R1C3 Trav14-1-201ENSMUST00000198297 399 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
Trav3-3Q5R1C3 Gm44609-201ENSMUST00000207157 460 ntBASIC1.83□□□□□ -2.12
Trav3-3Q5R1C3 Gm45368-201ENSMUST00000209323 703 ntTSL 5 BASIC1.83□□□□□ -2.12
Trav3-3Q5R1C3 Gm19140-201ENSMUST00000209790 421 ntBASIC1.83□□□□□ -2.12
Trav3-3Q5R1C3 Gm45772-201ENSMUST00000212961 240 ntBASIC1.83□□□□□ -2.12
Trav3-3Q5R1C3 Gm46124-201ENSMUST00000215223 808 ntTSL 5 BASIC1.83□□□□□ -2.12
Trav3-3Q5R1C3 AC091260.1-201ENSMUST00000216112 229 ntBASIC1.83□□□□□ -2.12
Trav3-3Q5R1C3 Cenpk-201ENSMUST00000022227 1217 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
Trav3-3Q5R1C3 AC102603.1-201ENSMUST00000227481 584 ntBASIC1.83□□□□□ -2.12
Trav3-3Q5R1C3 Olfr835-201ENSMUST00000059315 936 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
Trav3-3Q5R1C3 Gm10298-201ENSMUST00000074801 265 ntBASIC1.83□□□□□ -2.12
Trav3-3Q5R1C3 Gm24044-201ENSMUST00000083107 156 ntBASIC1.83□□□□□ -2.12
Trav3-3Q5R1C3 Gm22866-201ENSMUST00000083947 177 ntBASIC1.83□□□□□ -2.12
Trav3-3Q5R1C3 Chst9-201ENSMUST00000053017 1620 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
Trav3-3Q5R1C3 Gm42801-201ENSMUST00000202562 2865 ntBASIC1.83□□□□□ -2.12
Trav3-3Q5R1C3 Gm45844-205ENSMUST00000210333 3861 ntAPPRIS P5 TSL 1 (best) BASIC1.82□□□□□ -2.12
Trav3-3Q5R1C3 Olfr722-201ENSMUST00000053290 1582 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
Trav3-3Q5R1C3 Gm25088-201ENSMUST00000101803 79 ntBASIC1.82□□□□□ -2.12
Trav3-3Q5R1C3 Gm24049-201ENSMUST00000102409 100 ntBASIC1.82□□□□□ -2.12
Trav3-3Q5R1C3 Gm13876-201ENSMUST00000118451 261 ntBASIC1.82□□□□□ -2.12
Trav3-3Q5R1C3 Gm7071-201ENSMUST00000120458 462 ntBASIC1.82□□□□□ -2.12
Trav3-3Q5R1C3 Gm15718-201ENSMUST00000131085 311 ntTSL 3 BASIC1.82□□□□□ -2.12
Trav3-3Q5R1C3 Gm16129-201ENSMUST00000152628 486 ntBASIC1.82□□□□□ -2.12
Trav3-3Q5R1C3 Gm22554-201ENSMUST00000157798 147 ntBASIC1.82□□□□□ -2.12
Trav3-3Q5R1C3 Gm24878-201ENSMUST00000158782 104 ntBASIC1.82□□□□□ -2.12
Trav3-3Q5R1C3 Gm17062-201ENSMUST00000166987 461 ntBASIC1.82□□□□□ -2.12
Trav3-3Q5R1C3 Defa27-201ENSMUST00000167683 282 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
Trav3-3Q5R1C3 Gm24897-201ENSMUST00000179033 107 ntBASIC1.82□□□□□ -2.12
Trav3-3Q5R1C3 Gm8532-201ENSMUST00000179174 461 ntBASIC1.82□□□□□ -2.12
Trav3-3Q5R1C3 Obox4-ps39-201ENSMUST00000184306 628 ntBASIC1.82□□□□□ -2.12
Trav3-3Q5R1C3 Gm42739-201ENSMUST00000200687 226 ntBASIC1.82□□□□□ -2.12
Trav3-3Q5R1C3 Gm16351-202ENSMUST00000209660 337 ntTSL 5 BASIC1.82□□□□□ -2.12
Trav3-3Q5R1C3 Gm45513-201ENSMUST00000210228 376 ntBASIC1.82□□□□□ -2.12
Trav3-3Q5R1C3 Gm8031-201ENSMUST00000213430 626 ntBASIC1.82□□□□□ -2.12
Trav3-3Q5R1C3 AC122225.1-201ENSMUST00000215641 369 ntBASIC1.82□□□□□ -2.12
Trav3-3Q5R1C3 Olfr800-202ENSMUST00000217094 3831 ntAPPRIS P1 TSL 3 BASIC1.82□□□□□ -2.12
Trav3-3Q5R1C3 CT030166.2-201ENSMUST00000222021 368 ntBASIC1.82□□□□□ -2.12
Trav3-3Q5R1C3 AL590503.1-201ENSMUST00000222053 321 ntBASIC1.82□□□□□ -2.12
Trav3-3Q5R1C3 AC123656.2-201ENSMUST00000226726 227 ntBASIC1.82□□□□□ -2.12
Trav3-3Q5R1C3 AC113031.5-201ENSMUST00000227116 606 ntBASIC1.82□□□□□ -2.12
Trav3-3Q5R1C3 AC134577.1-201ENSMUST00000227572 295 ntBASIC1.82□□□□□ -2.12
Trav3-3Q5R1C3 Gm23848-201ENSMUST00000083826 106 ntBASIC1.82□□□□□ -2.12
Trav3-3Q5R1C3 Gm25628-201ENSMUST00000084002 105 ntBASIC1.82□□□□□ -2.12
Trav3-3Q5R1C3 Tcp11x2-201ENSMUST00000078605 1776 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
Trav3-3Q5R1C3 Olfr1291-ps1-201ENSMUST00000121345 5403 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
Trav3-3Q5R1C3 Snhg14-213ENSMUST00000190666 3708 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
Trav3-3Q5R1C3 Gm17969-201ENSMUST00000185706 2557 ntBASIC1.81□□□□□ -2.12
Trav3-3Q5R1C3 Olfr814-202ENSMUST00000213742 3798 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
Trav3-3Q5R1C3 Trdj2-201ENSMUST00000103683 59 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
Trav3-3Q5R1C3 Gm22936-201ENSMUST00000103955 126 ntBASIC1.81□□□□□ -2.12
Trav3-3Q5R1C3 Gm22494-201ENSMUST00000104495 128 ntBASIC1.81□□□□□ -2.12
Trav3-3Q5R1C3 Gm25539-201ENSMUST00000116886 122 ntBASIC1.81□□□□□ -2.12
Trav3-3Q5R1C3 Rpl30-ps10-201ENSMUST00000117119 347 ntBASIC1.81□□□□□ -2.12
Retrieved 100 of 76,532 protein–RNA pairs in 103.9 ms