Protein–RNA interactions for Protein: Q5R1B6

Trav8d-2, T cell receptor alpha variable 8D-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-2Q5R1B6 Gm23588-201ENSMUST00000157659 99 ntBASIC2.25□□□□□ -2.05
Trav8d-2Q5R1B6 Gm24736-201ENSMUST00000158862 130 ntBASIC2.25□□□□□ -2.05
Trav8d-2Q5R1B6 Gm15562-201ENSMUST00000161397 426 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
Trav8d-2Q5R1B6 Vmn2r-ps79-201ENSMUST00000174256 377 ntBASIC2.25□□□□□ -2.05
Trav8d-2Q5R1B6 Gm22192-201ENSMUST00000175128 85 ntBASIC2.25□□□□□ -2.05
Trav8d-2Q5R1B6 Vmn1r14-201ENSMUST00000177435 912 ntAPPRIS P2 BASIC2.25□□□□□ -2.05
Trav8d-2Q5R1B6 Mir7225-201ENSMUST00000184178 54 ntBASIC2.25□□□□□ -2.05
Trav8d-2Q5R1B6 1700015G11Rik-203ENSMUST00000185841 305 ntAPPRIS ALT2 TSL 5 BASIC2.25□□□□□ -2.05
Trav8d-2Q5R1B6 Gm29263-201ENSMUST00000188718 463 ntBASIC2.25□□□□□ -2.05
Trav8d-2Q5R1B6 Rgs1-208ENSMUST00000189061 3841 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
Trav8d-2Q5R1B6 Gm28384-201ENSMUST00000189079 463 ntBASIC2.25□□□□□ -2.05
Trav8d-2Q5R1B6 Gm29276-201ENSMUST00000190453 932 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
Trav8d-2Q5R1B6 Gm28466-201ENSMUST00000190678 659 ntBASIC2.25□□□□□ -2.05
Trav8d-2Q5R1B6 Gm38353-201ENSMUST00000192351 617 ntTSL 3 BASIC2.25□□□□□ -2.05
Trav8d-2Q5R1B6 Gm40292-201ENSMUST00000202383 553 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
Trav8d-2Q5R1B6 Gm45382-201ENSMUST00000210607 151 ntBASIC2.25□□□□□ -2.05
Trav8d-2Q5R1B6 AC155715.1-201ENSMUST00000213575 463 ntBASIC2.25□□□□□ -2.05
Trav8d-2Q5R1B6 Gm9068-201ENSMUST00000217393 455 ntBASIC2.25□□□□□ -2.05
Trav8d-2Q5R1B6 AC157494.1-201ENSMUST00000221127 549 ntTSL 5 BASIC2.25□□□□□ -2.05
Trav8d-2Q5R1B6 Gm35732-201ENSMUST00000221737 356 ntTSL 3 BASIC2.25□□□□□ -2.05
Trav8d-2Q5R1B6 Gm7214-201ENSMUST00000222428 272 ntBASIC2.25□□□□□ -2.05
Trav8d-2Q5R1B6 3830406C13Rik-217ENSMUST00000225773 417 ntBASIC2.25□□□□□ -2.05
Trav8d-2Q5R1B6 Gm25632-201ENSMUST00000083112 85 ntBASIC2.25□□□□□ -2.05
Trav8d-2Q5R1B6 Gm25411-201ENSMUST00000083760 151 ntBASIC2.25□□□□□ -2.05
Trav8d-2Q5R1B6 Olfr835-202ENSMUST00000213018 2690 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
Trav8d-2Q5R1B6 Zfp936-201ENSMUST00000072829 1368 ntTSL 5 BASIC2.24□□□□□ -2.05
Trav8d-2Q5R1B6 Adam29-201ENSMUST00000053441 2726 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
Trav8d-2Q5R1B6 Snora36b-201ENSMUST00000104383 132 ntBASIC2.24□□□□□ -2.05
Trav8d-2Q5R1B6 Gm13640-201ENSMUST00000118445 264 ntBASIC2.24□□□□□ -2.05
Trav8d-2Q5R1B6 Gm12042-201ENSMUST00000120479 301 ntBASIC2.24□□□□□ -2.05
Trav8d-2Q5R1B6 Gm12155-201ENSMUST00000121267 160 ntBASIC2.24□□□□□ -2.05
Trav8d-2Q5R1B6 Trav20-201ENSMUST00000142754 347 ntBASIC2.24□□□□□ -2.05
Trav8d-2Q5R1B6 Gm2855-201ENSMUST00000166765 456 ntBASIC2.24□□□□□ -2.05
Trav8d-2Q5R1B6 Gm23289-201ENSMUST00000175615 108 ntBASIC2.24□□□□□ -2.05
Trav8d-2Q5R1B6 Gm10267-202ENSMUST00000181652 341 ntAPPRIS P2 TSL 5 BASIC2.24□□□□□ -2.05
Trav8d-2Q5R1B6 1700040F17Rik-201ENSMUST00000187158 817 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
Trav8d-2Q5R1B6 Gm29597-201ENSMUST00000188035 308 ntBASIC2.24□□□□□ -2.05
Trav8d-2Q5R1B6 Gm28802-201ENSMUST00000188624 944 ntBASIC2.24□□□□□ -2.05
Trav8d-2Q5R1B6 Gm37568-201ENSMUST00000191755 364 ntBASIC2.24□□□□□ -2.05
Trav8d-2Q5R1B6 Gm38311-201ENSMUST00000192945 165 ntBASIC2.24□□□□□ -2.05
Trav8d-2Q5R1B6 Gm37459-202ENSMUST00000195007 563 ntTSL 3 BASIC2.24□□□□□ -2.05
Trav8d-2Q5R1B6 Igkv13-61-1-201ENSMUST00000198255 296 ntBASIC2.24□□□□□ -2.05
Trav8d-2Q5R1B6 Gm43109-201ENSMUST00000198269 753 ntTSL 3 BASIC2.24□□□□□ -2.05
Trav8d-2Q5R1B6 Gm42818-201ENSMUST00000198869 987 ntBASIC2.24□□□□□ -2.05
Trav8d-2Q5R1B6 Igkv13-71-1-201ENSMUST00000199934 264 ntBASIC2.24□□□□□ -2.05
Trav8d-2Q5R1B6 Gm44254-201ENSMUST00000204184 322 ntBASIC2.24□□□□□ -2.05
Trav8d-2Q5R1B6 Gm45049-201ENSMUST00000207586 591 ntBASIC2.24□□□□□ -2.05
Trav8d-2Q5R1B6 Gm45654-201ENSMUST00000210980 123 ntBASIC2.24□□□□□ -2.05
Trav8d-2Q5R1B6 Cwc15-202ENSMUST00000213913 831 ntAPPRIS P1 TSL 3 BASIC2.24□□□□□ -2.05
Trav8d-2Q5R1B6 Gm39388-201ENSMUST00000214502 1041 ntTSL 5 BASIC2.24□□□□□ -2.05
Trav8d-2Q5R1B6 CT009733.1-203ENSMUST00000224033 451 ntBASIC2.24□□□□□ -2.05
Trav8d-2Q5R1B6 CT030662.1-201ENSMUST00000227380 232 ntBASIC2.24□□□□□ -2.05
Trav8d-2Q5R1B6 Defb39-201ENSMUST00000075504 252 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
Trav8d-2Q5R1B6 Gm25755-201ENSMUST00000083396 107 ntBASIC2.24□□□□□ -2.05
Trav8d-2Q5R1B6 AC125532.1-201ENSMUST00000216210 2334 ntBASIC2.24□□□□□ -2.05
Trav8d-2Q5R1B6 Gm37602-201ENSMUST00000195187 3310 ntBASIC2.24□□□□□ -2.05
Trav8d-2Q5R1B6 Olfr1477-202ENSMUST00000217001 4000 ntAPPRIS P1 TSL 2 BASIC2.23□□□□□ -2.05
Trav8d-2Q5R1B6 Trbv5-201ENSMUST00000103266 368 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
Trav8d-2Q5R1B6 Gm23766-201ENSMUST00000103894 80 ntBASIC2.23□□□□□ -2.05
Trav8d-2Q5R1B6 Gm25938-201ENSMUST00000104139 166 ntBASIC2.23□□□□□ -2.05
Trav8d-2Q5R1B6 n-R5s26-201ENSMUST00000104601 122 ntBASIC2.23□□□□□ -2.05
Trav8d-2Q5R1B6 Gm12814-201ENSMUST00000117091 846 ntBASIC2.23□□□□□ -2.05
Trav8d-2Q5R1B6 n-R5s159-201ENSMUST00000122681 120 ntBASIC2.23□□□□□ -2.05
Trav8d-2Q5R1B6 Gm22947-201ENSMUST00000158559 91 ntBASIC2.23□□□□□ -2.05
Trav8d-2Q5R1B6 Gm21962-201ENSMUST00000166899 1017 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
Trav8d-2Q5R1B6 Mir3066-201ENSMUST00000175296 83 ntBASIC2.23□□□□□ -2.05
Trav8d-2Q5R1B6 Gm21758-201ENSMUST00000179336 819 ntBASIC2.23□□□□□ -2.05
Trav8d-2Q5R1B6 Gm27991-201ENSMUST00000184804 137 ntBASIC2.23□□□□□ -2.05
Trav8d-2Q5R1B6 Gm28666-201ENSMUST00000186649 274 ntBASIC2.23□□□□□ -2.05
Trav8d-2Q5R1B6 Gm29647-201ENSMUST00000188795 666 ntBASIC2.23□□□□□ -2.05
Trav8d-2Q5R1B6 Gm20832-201ENSMUST00000189076 665 ntBASIC2.23□□□□□ -2.05
Trav8d-2Q5R1B6 Gm28241-201ENSMUST00000190916 235 ntBASIC2.23□□□□□ -2.05
Trav8d-2Q5R1B6 Gm28504-201ENSMUST00000190977 666 ntBASIC2.23□□□□□ -2.05
Trav8d-2Q5R1B6 Gm31511-201ENSMUST00000193134 657 ntBASIC2.23□□□□□ -2.05
Trav8d-2Q5R1B6 Gm35843-201ENSMUST00000193716 666 ntBASIC2.23□□□□□ -2.05
Trav8d-2Q5R1B6 Gm30638-201ENSMUST00000195570 656 ntBASIC2.23□□□□□ -2.05
Trav8d-2Q5R1B6 Gm36728-201ENSMUST00000195782 665 ntBASIC2.23□□□□□ -2.05
Trav8d-2Q5R1B6 Gm43083-201ENSMUST00000199594 476 ntBASIC2.23□□□□□ -2.05
Trav8d-2Q5R1B6 Gm15235-201ENSMUST00000200572 194 ntBASIC2.23□□□□□ -2.05
Trav8d-2Q5R1B6 Gm38405-203ENSMUST00000208548 400 ntTSL 5 BASIC2.23□□□□□ -2.05
Trav8d-2Q5R1B6 Gm8031-201ENSMUST00000213430 626 ntBASIC2.23□□□□□ -2.05
Trav8d-2Q5R1B6 Olfr820-201ENSMUST00000059244 1061 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
Trav8d-2Q5R1B6 Olfr385-201ENSMUST00000071553 939 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
Trav8d-2Q5R1B6 Mir137-201ENSMUST00000083635 73 ntBASIC2.23□□□□□ -2.05
Trav8d-2Q5R1B6 Zfp953-201ENSMUST00000081582 4677 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
Trav8d-2Q5R1B6 Gm37515-201ENSMUST00000193321 3817 ntBASIC2.22□□□□□ -2.05
Trav8d-2Q5R1B6 N4bp2l2-201ENSMUST00000118316 8982 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
Trav8d-2Q5R1B6 AC125374.3-201ENSMUST00000214983 2810 ntBASIC2.22□□□□□ -2.05
Trav8d-2Q5R1B6 Vmn1r29-204ENSMUST00000228038 4520 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
Trav8d-2Q5R1B6 Gm13343-201ENSMUST00000116474 105 ntBASIC2.22□□□□□ -2.05
Trav8d-2Q5R1B6 Gm12636-201ENSMUST00000117395 624 ntBASIC2.22□□□□□ -2.05
Trav8d-2Q5R1B6 Gm14359-201ENSMUST00000118883 424 ntBASIC2.22□□□□□ -2.05
Trav8d-2Q5R1B6 Rps13-ps8-201ENSMUST00000118906 401 ntBASIC2.22□□□□□ -2.05
Trav8d-2Q5R1B6 Olfr381-202ENSMUST00000119863 1065 ntAPPRIS P1 TSL 3 BASIC2.22□□□□□ -2.05
Trav8d-2Q5R1B6 Gm14360-201ENSMUST00000120670 393 ntBASIC2.22□□□□□ -2.05
Trav8d-2Q5R1B6 Gm14804-201ENSMUST00000122322 508 ntBASIC2.22□□□□□ -2.05
Trav8d-2Q5R1B6 Gm9498-201ENSMUST00000140849 291 ntBASIC2.22□□□□□ -2.05
Trav8d-2Q5R1B6 Gm25910-201ENSMUST00000157620 140 ntBASIC2.22□□□□□ -2.05
Trav8d-2Q5R1B6 Gm24010-201ENSMUST00000157731 282 ntBASIC2.22□□□□□ -2.05
Trav8d-2Q5R1B6 Tcrg-C3-201ENSMUST00000164407 519 ntAPPRIS ALT2 TSL 1 (best) BASIC2.22□□□□□ -2.05
Retrieved 100 of 76,532 protein–RNA pairs in 77.3 ms