Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Gm29754-201ENSMUST00000206269 358 ntBASIC2.2□□□□□ -2.06
Upf3bQ3ULL6 Sult2a6-201ENSMUST00000076576 961 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
Upf3bQ3ULL6 n-R5s196-201ENSMUST00000083136 117 ntBASIC2.2□□□□□ -2.06
Upf3bQ3ULL6 Gm23650-201ENSMUST00000083355 70 ntBASIC2.2□□□□□ -2.06
Upf3bQ3ULL6 Gm22353-201ENSMUST00000083918 136 ntBASIC2.2□□□□□ -2.06
Upf3bQ3ULL6 Olfr1487-203ENSMUST00000209005 2061 ntTSL 3 BASIC2.2□□□□□ -2.06
Upf3bQ3ULL6 Gm45262-201ENSMUST00000209917 1463 ntBASIC2.2□□□□□ -2.06
Upf3bQ3ULL6 Zfy2-201ENSMUST00000115891 2816 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
Upf3bQ3ULL6 Gm42664-201ENSMUST00000199417 3239 ntBASIC2.19□□□□□ -2.06
Upf3bQ3ULL6 Gm25213-201ENSMUST00000102388 113 ntBASIC2.19□□□□□ -2.06
Upf3bQ3ULL6 Zcchc9-ps-201ENSMUST00000117884 786 ntBASIC2.19□□□□□ -2.06
Upf3bQ3ULL6 Gm16411-201ENSMUST00000122164 1100 ntBASIC2.19□□□□□ -2.06
Upf3bQ3ULL6 Gm23137-201ENSMUST00000157559 107 ntBASIC2.19□□□□□ -2.06
Upf3bQ3ULL6 Gm22483-201ENSMUST00000157986 274 ntBASIC2.19□□□□□ -2.06
Upf3bQ3ULL6 Gm24857-201ENSMUST00000158061 310 ntBASIC2.19□□□□□ -2.06
Upf3bQ3ULL6 Vmn1r-ps62-201ENSMUST00000173275 910 ntBASIC2.19□□□□□ -2.06
Upf3bQ3ULL6 Vmn2r-ps79-201ENSMUST00000174256 377 ntBASIC2.19□□□□□ -2.06
Upf3bQ3ULL6 Vmn2r-ps70-201ENSMUST00000174636 302 ntBASIC2.19□□□□□ -2.06
Upf3bQ3ULL6 Gm27761-201ENSMUST00000184091 131 ntBASIC2.19□□□□□ -2.06
Upf3bQ3ULL6 1810007C17Rik-201ENSMUST00000187665 710 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
Upf3bQ3ULL6 Gm38149-201ENSMUST00000191943 339 ntBASIC2.19□□□□□ -2.06
Upf3bQ3ULL6 Igkv13-57-2-201ENSMUST00000196590 336 ntBASIC2.19□□□□□ -2.06
Upf3bQ3ULL6 Igkv1-136-201ENSMUST00000200635 297 ntBASIC2.19□□□□□ -2.06
Upf3bQ3ULL6 1700072O05Rik-201ENSMUST00000204672 321 ntTSL 5 BASIC2.19□□□□□ -2.06
Upf3bQ3ULL6 Gm45696-201ENSMUST00000212088 985 ntBASIC2.19□□□□□ -2.06
Upf3bQ3ULL6 Gm37797-201ENSMUST00000212114 815 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
Upf3bQ3ULL6 AC166060.1-201ENSMUST00000213509 425 ntTSL 5 BASIC2.19□□□□□ -2.06
Upf3bQ3ULL6 Gm35558-202ENSMUST00000221819 499 ntBASIC2.19□□□□□ -2.06
Upf3bQ3ULL6 Gm25411-201ENSMUST00000083760 151 ntBASIC2.19□□□□□ -2.06
Upf3bQ3ULL6 Vmn1r19-201ENSMUST00000089830 2255 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
Upf3bQ3ULL6 Tlr8-202ENSMUST00000112170 3431 ntAPPRIS P1 TSL 2 BASIC2.18□□□□□ -2.06
Upf3bQ3ULL6 Vmn1r178-203ENSMUST00000226489 2644 ntBASIC2.18□□□□□ -2.06
Upf3bQ3ULL6 Gm22270-201ENSMUST00000104034 132 ntBASIC2.18□□□□□ -2.06
Upf3bQ3ULL6 Gm14657-201ENSMUST00000117461 302 ntBASIC2.18□□□□□ -2.06
Upf3bQ3ULL6 Gm15112-201ENSMUST00000120152 860 ntBASIC2.18□□□□□ -2.06
Upf3bQ3ULL6 Gm12006-201ENSMUST00000120786 403 ntBASIC2.18□□□□□ -2.06
Upf3bQ3ULL6 Gm13555-201ENSMUST00000121668 319 ntBASIC2.18□□□□□ -2.06
Upf3bQ3ULL6 Gm25621-201ENSMUST00000157223 114 ntBASIC2.18□□□□□ -2.06
Upf3bQ3ULL6 Gm23342-201ENSMUST00000158958 115 ntBASIC2.18□□□□□ -2.06
Upf3bQ3ULL6 Vmn2r-ps76-201ENSMUST00000173876 739 ntBASIC2.18□□□□□ -2.06
Upf3bQ3ULL6 Gm26779-201ENSMUST00000181101 551 ntTSL 2 BASIC2.18□□□□□ -2.06
Upf3bQ3ULL6 Gm27753-201ENSMUST00000184742 203 ntBASIC2.18□□□□□ -2.06
Upf3bQ3ULL6 Gm20058-201ENSMUST00000186939 284 ntBASIC2.18□□□□□ -2.06
Upf3bQ3ULL6 Trbv6-201ENSMUST00000193743 276 ntBASIC2.18□□□□□ -2.06
Upf3bQ3ULL6 Gm6059-201ENSMUST00000196903 340 ntBASIC2.18□□□□□ -2.06
Upf3bQ3ULL6 Gm32877-201ENSMUST00000197419 709 ntTSL 5 BASIC2.18□□□□□ -2.06
Upf3bQ3ULL6 Gm42958-201ENSMUST00000197595 318 ntBASIC2.18□□□□□ -2.06
Upf3bQ3ULL6 Igkv13-82-201ENSMUST00000200308 346 ntBASIC2.18□□□□□ -2.06
Upf3bQ3ULL6 4930528H21Rik-201ENSMUST00000204264 495 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
Upf3bQ3ULL6 Gm2511-201ENSMUST00000205521 457 ntTSL 3 BASIC2.18□□□□□ -2.06
Upf3bQ3ULL6 AC117688.1-201ENSMUST00000213142 832 ntTSL 5 BASIC2.18□□□□□ -2.06
Upf3bQ3ULL6 AC117198.1-201ENSMUST00000217080 651 ntTSL 5 BASIC2.18□□□□□ -2.06
Upf3bQ3ULL6 AC153529.1-201ENSMUST00000217818 370 ntBASIC2.18□□□□□ -2.06
Upf3bQ3ULL6 CT030187.1-201ENSMUST00000220605 252 ntBASIC2.18□□□□□ -2.06
Upf3bQ3ULL6 Gm35190-201ENSMUST00000222335 526 ntTSL 3 BASIC2.18□□□□□ -2.06
Upf3bQ3ULL6 AC183096.2-201ENSMUST00000228733 457 ntBASIC2.18□□□□□ -2.06
Upf3bQ3ULL6 Olfr801-203ENSMUST00000213294 4045 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
Upf3bQ3ULL6 Gpr174-207ENSMUST00000178838 4955 ntAPPRIS P1 TSL 2 BASIC2.18□□□□□ -2.06
Upf3bQ3ULL6 Olfr894-202ENSMUST00000212992 3234 ntAPPRIS ALT2 TSL 5 BASIC2.17□□□□□ -2.06
Upf3bQ3ULL6 Gm11219-201ENSMUST00000118565 358 ntBASIC2.17□□□□□ -2.06
Upf3bQ3ULL6 Gm12935-201ENSMUST00000119352 246 ntBASIC2.17□□□□□ -2.06
Upf3bQ3ULL6 Gm15218-201ENSMUST00000131006 618 ntTSL 5 BASIC2.17□□□□□ -2.06
Upf3bQ3ULL6 Gm24911-201ENSMUST00000157292 136 ntBASIC2.17□□□□□ -2.06
Upf3bQ3ULL6 Cep41-210ENSMUST00000169422 438 ntTSL 3 BASIC2.17□□□□□ -2.06
Upf3bQ3ULL6 Gm19089-201ENSMUST00000197207 613 ntBASIC2.17□□□□□ -2.06
Upf3bQ3ULL6 Gm43358-201ENSMUST00000199217 970 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
Upf3bQ3ULL6 Gm43131-201ENSMUST00000200042 969 ntTSL 5 BASIC2.17□□□□□ -2.06
Upf3bQ3ULL6 Gm44818-201ENSMUST00000206608 358 ntBASIC2.17□□□□□ -2.06
Upf3bQ3ULL6 Gm17890-201ENSMUST00000221419 757 ntBASIC2.17□□□□□ -2.06
Upf3bQ3ULL6 AC120540.1-201ENSMUST00000221879 324 ntBASIC2.17□□□□□ -2.06
Upf3bQ3ULL6 AC173345.1-201ENSMUST00000222837 306 ntTSL 5 BASIC2.17□□□□□ -2.06
Upf3bQ3ULL6 AC160962.2-201ENSMUST00000224761 632 ntBASIC2.17□□□□□ -2.06
Upf3bQ3ULL6 AC154271.1-201ENSMUST00000224780 383 ntBASIC2.17□□□□□ -2.06
Upf3bQ3ULL6 Pmch-201ENSMUST00000048621 749 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
Upf3bQ3ULL6 Olfr951-201ENSMUST00000078531 945 ntAPPRIS P2 BASIC2.17□□□□□ -2.06
Upf3bQ3ULL6 Mir222-201ENSMUST00000083537 79 ntBASIC2.17□□□□□ -2.06
Upf3bQ3ULL6 n-R5s200-201ENSMUST00000104194 113 ntBASIC2.16□□□□□ -2.06
Upf3bQ3ULL6 Mir1192-201ENSMUST00000116976 121 ntBASIC2.16□□□□□ -2.06
Upf3bQ3ULL6 Gm14594-201ENSMUST00000118052 537 ntBASIC2.16□□□□□ -2.06
Upf3bQ3ULL6 Gm14590-201ENSMUST00000118934 537 ntBASIC2.16□□□□□ -2.06
Upf3bQ3ULL6 Gm15029-201ENSMUST00000119742 199 ntBASIC2.16□□□□□ -2.06
Upf3bQ3ULL6 Gm14599-201ENSMUST00000120469 474 ntBASIC2.16□□□□□ -2.06
Upf3bQ3ULL6 Gm12607-201ENSMUST00000120724 493 ntBASIC2.16□□□□□ -2.06
Upf3bQ3ULL6 Gm26345-201ENSMUST00000157534 120 ntBASIC2.16□□□□□ -2.06
Upf3bQ3ULL6 Gm25460-201ENSMUST00000157954 127 ntBASIC2.16□□□□□ -2.06
Upf3bQ3ULL6 Klra5-204ENSMUST00000169901 792 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
Upf3bQ3ULL6 Vmn1r-ps10-201ENSMUST00000176165 889 ntBASIC2.16□□□□□ -2.06
Upf3bQ3ULL6 Gm24264-201ENSMUST00000179835 94 ntBASIC2.16□□□□□ -2.06
Upf3bQ3ULL6 Gm14596-201ENSMUST00000180268 537 ntBASIC2.16□□□□□ -2.06
Upf3bQ3ULL6 Gm14595-201ENSMUST00000180335 537 ntBASIC2.16□□□□□ -2.06
Upf3bQ3ULL6 Mir7014-201ENSMUST00000183853 63 ntBASIC2.16□□□□□ -2.06
Upf3bQ3ULL6 Gm28076-201ENSMUST00000188337 410 ntTSL 3 BASIC2.16□□□□□ -2.06
Upf3bQ3ULL6 Scgb2b14-ps-201ENSMUST00000189424 336 ntBASIC2.16□□□□□ -2.06
Upf3bQ3ULL6 Gm44844-201ENSMUST00000207242 336 ntBASIC2.16□□□□□ -2.06
Upf3bQ3ULL6 Gm44548-201ENSMUST00000208929 192 ntBASIC2.16□□□□□ -2.06
Upf3bQ3ULL6 Gm45652-201ENSMUST00000210926 3831 ntBASIC2.16□□□□□ -2.06
Upf3bQ3ULL6 Gm45587-201ENSMUST00000211548 765 ntTSL 5 BASIC2.16□□□□□ -2.06
Upf3bQ3ULL6 A430103D13Rik-201ENSMUST00000220077 857 ntBASIC2.16□□□□□ -2.06
Upf3bQ3ULL6 Zfp706-205ENSMUST00000228275 481 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
Upf3bQ3ULL6 Adam29-201ENSMUST00000053441 2726 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
Retrieved 100 of 76,532 protein–RNA pairs in 83.5 ms