Protein–RNA interactions for Protein: Q2UY11

Col28a1, Collagen alpha-1(XXVIII) chain, mousemouse

Predictions only

Length 1,141 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col28a1Q2UY11 Ighv1-6-201ENSMUST00000193849 293 ntBASIC3.31□□□□□ -1.88
Col28a1Q2UY11 Gm43067-201ENSMUST00000201580 445 ntTSL 3 BASIC3.31□□□□□ -1.88
Col28a1Q2UY11 CT010454.1-201ENSMUST00000225975 265 ntBASIC3.31□□□□□ -1.88
Col28a1Q2UY11 Gm23412-201ENSMUST00000083017 107 ntBASIC3.31□□□□□ -1.88
Col28a1Q2UY11 Gm10212-201ENSMUST00000087884 324 ntBASIC3.31□□□□□ -1.88
Col28a1Q2UY11 Vmn2r23-201ENSMUST00000172391 2602 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Col28a1Q2UY11 Vmn1r185-207ENSMUST00000227695 5292 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Col28a1Q2UY11 Vmn1r89-208ENSMUST00000228587 2061 ntAPPRIS P2 BASIC3.31□□□□□ -1.88
Col28a1Q2UY11 Gm12010-201ENSMUST00000122400 2017 ntBASIC3.31□□□□□ -1.88
Col28a1Q2UY11 Gm6325-201ENSMUST00000122015 3114 ntBASIC3.3□□□□□ -1.88
Col28a1Q2UY11 Gm38286-201ENSMUST00000195128 3105 ntBASIC3.3□□□□□ -1.88
Col28a1Q2UY11 Vmn1r46-203ENSMUST00000226715 10861 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Col28a1Q2UY11 Vmn1r46-205ENSMUST00000228349 10861 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Col28a1Q2UY11 Olfr935-202ENSMUST00000214157 1693 ntAPPRIS P1 TSL 3 BASIC3.3□□□□□ -1.88
Col28a1Q2UY11 Vmn2r108-201ENSMUST00000167314 2568 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Col28a1Q2UY11 Gm26145-201ENSMUST00000104476 127 ntBASIC3.3□□□□□ -1.88
Col28a1Q2UY11 Gm3443-201ENSMUST00000112772 285 ntAPPRIS P1 TSL 3 BASIC3.3□□□□□ -1.88
Col28a1Q2UY11 Gm11813-201ENSMUST00000118586 291 ntBASIC3.3□□□□□ -1.88
Col28a1Q2UY11 Gm11704-201ENSMUST00000120031 214 ntBASIC3.3□□□□□ -1.88
Col28a1Q2UY11 Gm23602-201ENSMUST00000157258 132 ntBASIC3.3□□□□□ -1.88
Col28a1Q2UY11 Gm25428-201ENSMUST00000157608 114 ntBASIC3.3□□□□□ -1.88
Col28a1Q2UY11 Gm20542-201ENSMUST00000174582 372 ntBASIC3.3□□□□□ -1.88
Col28a1Q2UY11 Gm28591-201ENSMUST00000185259 183 ntBASIC3.3□□□□□ -1.88
Col28a1Q2UY11 Gm28641-201ENSMUST00000187783 335 ntTSL 5 BASIC3.3□□□□□ -1.88
Col28a1Q2UY11 Ly96-202ENSMUST00000190366 429 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Col28a1Q2UY11 Gm7182-201ENSMUST00000193351 732 ntBASIC3.3□□□□□ -1.88
Col28a1Q2UY11 Ighv2-8-201ENSMUST00000193935 262 ntBASIC3.3□□□□□ -1.88
Col28a1Q2UY11 Gm3010-201ENSMUST00000198805 448 ntBASIC3.3□□□□□ -1.88
Col28a1Q2UY11 Gm43393-201ENSMUST00000200147 194 ntBASIC3.3□□□□□ -1.88
Col28a1Q2UY11 Gm45150-201ENSMUST00000206051 467 ntBASIC3.3□□□□□ -1.88
Col28a1Q2UY11 AC161054.1-201ENSMUST00000214319 184 ntBASIC3.3□□□□□ -1.88
Col28a1Q2UY11 Gm39380-201ENSMUST00000214710 192 ntTSL 5 BASIC3.3□□□□□ -1.88
Col28a1Q2UY11 AC163033.1-201ENSMUST00000218608 157 ntBASIC3.3□□□□□ -1.88
Col28a1Q2UY11 CT572985.2-201ENSMUST00000220496 211 ntBASIC3.3□□□□□ -1.88
Col28a1Q2UY11 1700030L22Rik-201ENSMUST00000221214 567 ntTSL 5 BASIC3.3□□□□□ -1.88
Col28a1Q2UY11 Rny1-201ENSMUST00000083767 112 ntBASIC3.3□□□□□ -1.88
Col28a1Q2UY11 Gm10222-201ENSMUST00000088336 294 ntBASIC3.3□□□□□ -1.88
Col28a1Q2UY11 Gm36960-201ENSMUST00000195491 2035 ntBASIC3.3□□□□□ -1.88
Col28a1Q2UY11 Vmn1r89-204ENSMUST00000227239 1992 ntAPPRIS P2 BASIC3.3□□□□□ -1.88
Col28a1Q2UY11 Ccr2-202ENSMUST00000165984 3515 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Col28a1Q2UY11 Olfr109-203ENSMUST00000214938 5550 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Col28a1Q2UY11 Gm3055-202ENSMUST00000218939 4067 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Col28a1Q2UY11 Zfp781-202ENSMUST00000219144 4067 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Col28a1Q2UY11 Zfp971-202ENSMUST00000108926 1413 ntAPPRIS P1 TSL 3 BASIC3.29□□□□□ -1.88
Col28a1Q2UY11 Olfr397-204ENSMUST00000216291 4168 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Col28a1Q2UY11 Gm44120-201ENSMUST00000203022 3023 ntBASIC3.29□□□□□ -1.88
Col28a1Q2UY11 Zfp990-202ENSMUST00000105742 2996 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
Col28a1Q2UY11 Olfr235-205ENSMUST00000214638 3459 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Col28a1Q2UY11 Vmn1r66-205ENSMUST00000228622 3304 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Col28a1Q2UY11 Gm14973-201ENSMUST00000117248 255 ntBASIC3.29□□□□□ -1.88
Col28a1Q2UY11 Gm13167-201ENSMUST00000118554 578 ntBASIC3.29□□□□□ -1.88
Col28a1Q2UY11 Gm14013-201ENSMUST00000119006 270 ntBASIC3.29□□□□□ -1.88
Col28a1Q2UY11 Gm11582-201ENSMUST00000121041 236 ntBASIC3.29□□□□□ -1.88
Col28a1Q2UY11 Gm13511-201ENSMUST00000121167 363 ntBASIC3.29□□□□□ -1.88
Col28a1Q2UY11 Gm23671-201ENSMUST00000157472 103 ntBASIC3.29□□□□□ -1.88
Col28a1Q2UY11 Gm24060-201ENSMUST00000157494 95 ntBASIC3.29□□□□□ -1.88
Col28a1Q2UY11 Gm22843-201ENSMUST00000157710 134 ntBASIC3.29□□□□□ -1.88
Col28a1Q2UY11 Gm24618-201ENSMUST00000177718 94 ntBASIC3.29□□□□□ -1.88
Col28a1Q2UY11 Gm23953-201ENSMUST00000178214 94 ntBASIC3.29□□□□□ -1.88
Col28a1Q2UY11 Gm22448-201ENSMUST00000179254 107 ntBASIC3.29□□□□□ -1.88
Col28a1Q2UY11 Gm26332-201ENSMUST00000179813 94 ntBASIC3.29□□□□□ -1.88
Col28a1Q2UY11 Gm22863-201ENSMUST00000180265 94 ntBASIC3.29□□□□□ -1.88
Col28a1Q2UY11 Gm27803-201ENSMUST00000183763 119 ntBASIC3.29□□□□□ -1.88
Col28a1Q2UY11 Gm28030-201ENSMUST00000184987 138 ntBASIC3.29□□□□□ -1.88
Col28a1Q2UY11 Traj57-202ENSMUST00000196977 63 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Col28a1Q2UY11 Olfr439-ps1-201ENSMUST00000204679 307 ntBASIC3.29□□□□□ -1.88
Col28a1Q2UY11 Gm6112-201ENSMUST00000208037 629 ntBASIC3.29□□□□□ -1.88
Col28a1Q2UY11 Gm45327-201ENSMUST00000211612 565 ntBASIC3.29□□□□□ -1.88
Col28a1Q2UY11 Gm30674-201ENSMUST00000214523 392 ntBASIC3.29□□□□□ -1.88
Col28a1Q2UY11 Gm21007-201ENSMUST00000221024 326 ntBASIC3.29□□□□□ -1.88
Col28a1Q2UY11 Gm35190-201ENSMUST00000222335 526 ntTSL 3 BASIC3.29□□□□□ -1.88
Col28a1Q2UY11 AC154552.1-201ENSMUST00000222969 202 ntBASIC3.29□□□□□ -1.88
Col28a1Q2UY11 AC091783.4-201ENSMUST00000224940 611 ntBASIC3.29□□□□□ -1.88
Col28a1Q2UY11 Rps15a-ps1-201ENSMUST00000071120 393 ntBASIC3.29□□□□□ -1.88
Col28a1Q2UY11 Gm25205-201ENSMUST00000082841 103 ntBASIC3.29□□□□□ -1.88
Col28a1Q2UY11 Gm25480-201ENSMUST00000083217 133 ntBASIC3.29□□□□□ -1.88
Col28a1Q2UY11 Gm10553-201ENSMUST00000097669 372 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Col28a1Q2UY11 Ccr3-201ENSMUST00000039171 3272 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Col28a1Q2UY11 Nebl-207ENSMUST00000132418 1734 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Col28a1Q2UY11 Olfr1030-201ENSMUST00000056849 4522 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Col28a1Q2UY11 Rbm31y-201ENSMUST00000179408 1955 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Col28a1Q2UY11 Gm21379-201ENSMUST00000179772 1955 ntBASIC3.29□□□□□ -1.88
Col28a1Q2UY11 Mrgprx2-201ENSMUST00000098433 4610 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
Col28a1Q2UY11 A230004M16Rik-202ENSMUST00000139508 4468 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Col28a1Q2UY11 Gm25376-201ENSMUST00000104340 133 ntBASIC3.28□□□□□ -1.88
Col28a1Q2UY11 Scgb1b24-201ENSMUST00000108087 279 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
Col28a1Q2UY11 Gm23653-201ENSMUST00000116751 97 ntBASIC3.28□□□□□ -1.88
Col28a1Q2UY11 Gm14622-201ENSMUST00000117117 468 ntBASIC3.28□□□□□ -1.88
Col28a1Q2UY11 Gm13378-201ENSMUST00000117483 336 ntBASIC3.28□□□□□ -1.88
Col28a1Q2UY11 Gm14823-201ENSMUST00000117698 238 ntBASIC3.28□□□□□ -1.88
Col28a1Q2UY11 Gm15195-201ENSMUST00000118775 263 ntBASIC3.28□□□□□ -1.88
Col28a1Q2UY11 Gm5762-201ENSMUST00000119204 258 ntBASIC3.28□□□□□ -1.88
Col28a1Q2UY11 Gm13518-201ENSMUST00000120018 233 ntBASIC3.28□□□□□ -1.88
Col28a1Q2UY11 Gm16005-201ENSMUST00000120515 269 ntBASIC3.28□□□□□ -1.88
Col28a1Q2UY11 Gm14287-201ENSMUST00000121060 117 ntBASIC3.28□□□□□ -1.88
Col28a1Q2UY11 Gm23463-201ENSMUST00000122468 99 ntBASIC3.28□□□□□ -1.88
Col28a1Q2UY11 n-R5s32-201ENSMUST00000122495 103 ntBASIC3.28□□□□□ -1.88
Col28a1Q2UY11 Gm22037-201ENSMUST00000157280 296 ntBASIC3.28□□□□□ -1.88
Col28a1Q2UY11 Gm24546-201ENSMUST00000158652 102 ntBASIC3.28□□□□□ -1.88
Col28a1Q2UY11 Gm7953-201ENSMUST00000168278 469 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 80.6 ms