Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Gm6872-201ENSMUST00000165001 700 ntBASIC5□□□□□ -1.61
Col9a1Q05722 Mir5134-201ENSMUST00000175529 78 ntBASIC5□□□□□ -1.61
Col9a1Q05722 Gm44054-201ENSMUST00000203814 372 ntBASIC5□□□□□ -1.61
Col9a1Q05722 AC107864.1-201ENSMUST00000217937 496 ntBASIC5□□□□□ -1.61
Col9a1Q05722 C230031I18Rik-201ENSMUST00000197856 3698 ntBASIC5□□□□□ -1.61
Col9a1Q05722 Vmn1r1-202ENSMUST00000227586 3766 ntAPPRIS P1 BASIC5□□□□□ -1.61
Col9a1Q05722 Usp29-204ENSMUST00000200535 7540 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Col9a1Q05722 Gm7529-201ENSMUST00000213753 1897 ntBASIC5□□□□□ -1.61
Col9a1Q05722 Vmn1r39-207ENSMUST00000228862 2398 ntAPPRIS P2 BASIC5□□□□□ -1.61
Col9a1Q05722 Olfr390-204ENSMUST00000215161 3740 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Col9a1Q05722 Glcci1-203ENSMUST00000161494 3248 ntTSL 2 BASIC5□□□□□ -1.61
Col9a1Q05722 Vmn1r185-203ENSMUST00000227264 5589 ntAPPRIS P1 BASIC5□□□□□ -1.61
Col9a1Q05722 AC154677.1-201ENSMUST00000227636 2805 ntBASIC5□□□□□ -1.61
Col9a1Q05722 Fancd2-201ENSMUST00000036340 5512 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
Col9a1Q05722 Gm4011-201ENSMUST00000174657 2555 ntBASIC5□□□□□ -1.61
Col9a1Q05722 Mcf2-201ENSMUST00000033478 3659 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
Col9a1Q05722 Gm45853-201ENSMUST00000212310 3171 ntBASIC5□□□□□ -1.61
Col9a1Q05722 Olfr905-202ENSMUST00000214377 4429 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
Col9a1Q05722 Atf2-204ENSMUST00000112007 4195 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Col9a1Q05722 Tmprss11b-201ENSMUST00000038448 4171 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Col9a1Q05722 Eya4-208ENSMUST00000220299 3615 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Col9a1Q05722 Olfr711-201ENSMUST00000051715 3035 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
Col9a1Q05722 Mir767-201ENSMUST00000103256 107 ntBASIC4.99□□□□□ -1.61
Col9a1Q05722 Gm26146-201ENSMUST00000104478 185 ntBASIC4.99□□□□□ -1.61
Col9a1Q05722 Gm16186-201ENSMUST00000120132 216 ntBASIC4.99□□□□□ -1.61
Col9a1Q05722 Gm28828-201ENSMUST00000186601 696 ntBASIC4.99□□□□□ -1.61
Col9a1Q05722 Gm28159-201ENSMUST00000190296 696 ntBASIC4.99□□□□□ -1.61
Col9a1Q05722 Mir7657-201ENSMUST00000196051 57 ntBASIC4.99□□□□□ -1.61
Col9a1Q05722 Gm43304-201ENSMUST00000196803 326 ntBASIC4.99□□□□□ -1.61
Col9a1Q05722 AC164086.1-201ENSMUST00000221038 289 ntBASIC4.99□□□□□ -1.61
Col9a1Q05722 Gm5321-201ENSMUST00000072050 447 ntBASIC4.99□□□□□ -1.61
Col9a1Q05722 Vmn1r83-202ENSMUST00000226701 2788 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Col9a1Q05722 Olfr44-202ENSMUST00000215065 3578 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
Col9a1Q05722 Gm4070-202ENSMUST00000176467 9007 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Col9a1Q05722 Gvin1-202ENSMUST00000183409 9005 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Col9a1Q05722 Hc-201ENSMUST00000028233 5445 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Col9a1Q05722 B130011K05Rik-201ENSMUST00000151765 3270 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Col9a1Q05722 Vps50-202ENSMUST00000164052 4824 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Col9a1Q05722 Vmn1r6-206ENSMUST00000227847 8073 ntAPPRIS P2 BASIC4.99□□□□□ -1.61
Col9a1Q05722 Prrc2c-201ENSMUST00000028016 8815 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
Col9a1Q05722 Olfr1348-207ENSMUST00000209029 2696 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
Col9a1Q05722 Fam111a-204ENSMUST00000151307 3687 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
Col9a1Q05722 CT009754.3-201ENSMUST00000220739 3661 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Col9a1Q05722 AC127281.1-201ENSMUST00000221075 3667 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Col9a1Q05722 Ryr3-201ENSMUST00000080673 15422 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
Col9a1Q05722 Gm2396-202ENSMUST00000188232 3433 ntTSL 5 BASIC4.98□□□□□ -1.61
Col9a1Q05722 Rfx6-201ENSMUST00000050455 3088 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Col9a1Q05722 Olfr984-203ENSMUST00000214856 5025 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Col9a1Q05722 Slc22a27-201ENSMUST00000075619 2152 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Col9a1Q05722 Vmn1r6-202ENSMUST00000226689 8453 ntAPPRIS P2 BASIC4.98□□□□□ -1.61
Col9a1Q05722 Rsrc2-203ENSMUST00000111515 4223 ntTSL 5 BASIC4.98□□□□□ -1.61
Col9a1Q05722 Themis-202ENSMUST00000060409 2278 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
Col9a1Q05722 Slc14a1-201ENSMUST00000091813 3665 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
Col9a1Q05722 Gm37848-201ENSMUST00000195288 3103 ntBASIC4.98□□□□□ -1.61
Col9a1Q05722 Tbl1xr1-201ENSMUST00000063988 6667 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Col9a1Q05722 Olfr1302-202ENSMUST00000214708 2461 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
Col9a1Q05722 Gm22750-201ENSMUST00000102076 103 ntBASIC4.98□□□□□ -1.61
Col9a1Q05722 Trgj3-201ENSMUST00000103562 60 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Col9a1Q05722 Gm9157-201ENSMUST00000117673 225 ntBASIC4.98□□□□□ -1.61
Col9a1Q05722 Gm12723-201ENSMUST00000120700 451 ntBASIC4.98□□□□□ -1.61
Col9a1Q05722 Gm45886-201ENSMUST00000148141 342 ntTSL 5 BASIC4.98□□□□□ -1.61
Col9a1Q05722 Gm22561-201ENSMUST00000157331 84 ntBASIC4.98□□□□□ -1.61
Col9a1Q05722 Mir7081-201ENSMUST00000184490 75 ntBASIC4.98□□□□□ -1.61
Col9a1Q05722 AC162934.1-201ENSMUST00000222880 309 ntBASIC4.98□□□□□ -1.61
Col9a1Q05722 AC174459.2-201ENSMUST00000226036 160 ntBASIC4.98□□□□□ -1.61
Col9a1Q05722 AC125405.1-201ENSMUST00000226406 589 ntBASIC4.98□□□□□ -1.61
Col9a1Q05722 Sprr2e-201ENSMUST00000068399 647 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Col9a1Q05722 Gm25006-201ENSMUST00000083813 107 ntBASIC4.98□□□□□ -1.61
Col9a1Q05722 Nkain2-202ENSMUST00000092603 273 ntTSL 5 BASIC4.98□□□□□ -1.61
Col9a1Q05722 Olfr49-202ENSMUST00000216214 5717 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Col9a1Q05722 Zfp607a-203ENSMUST00000205715 4031 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Col9a1Q05722 Postn-201ENSMUST00000073012 3189 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
Col9a1Q05722 Olfr1274-ps-202ENSMUST00000216111 3395 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Col9a1Q05722 Abcb7-201ENSMUST00000033695 5667 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Col9a1Q05722 Brinp3-201ENSMUST00000074622 4023 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Col9a1Q05722 Stxbp4-207ENSMUST00000143203 5985 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Col9a1Q05722 Mboat2-204ENSMUST00000221952 6792 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
Col9a1Q05722 Gm32647-201ENSMUST00000206116 3288 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Col9a1Q05722 Cntn6-205ENSMUST00000162872 3467 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Col9a1Q05722 Ube2n-201ENSMUST00000099329 3867 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Col9a1Q05722 Shoc2-202ENSMUST00000169861 4065 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Col9a1Q05722 Gm8979-201ENSMUST00000183386 7296 ntBASIC4.97□□□□□ -1.61
Col9a1Q05722 Kcnu1-201ENSMUST00000098858 3536 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Col9a1Q05722 Igkv1-110-201ENSMUST00000103321 401 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
Col9a1Q05722 Gm14500-201ENSMUST00000121647 113 ntBASIC4.97□□□□□ -1.61
Col9a1Q05722 Gm14629-201ENSMUST00000122428 144 ntBASIC4.97□□□□□ -1.61
Col9a1Q05722 Gm24894-201ENSMUST00000122744 118 ntBASIC4.97□□□□□ -1.61
Col9a1Q05722 Gm13371-201ENSMUST00000137756 469 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Col9a1Q05722 Gm12869-201ENSMUST00000156265 344 ntTSL 2 BASIC4.97□□□□□ -1.61
Col9a1Q05722 Crxos-205ENSMUST00000171280 571 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Col9a1Q05722 Gm25535-201ENSMUST00000175364 125 ntBASIC4.97□□□□□ -1.61
Col9a1Q05722 Gm28000-201ENSMUST00000184380 85 ntBASIC4.97□□□□□ -1.61
Col9a1Q05722 Gm29613-201ENSMUST00000185846 313 ntBASIC4.97□□□□□ -1.61
Col9a1Q05722 Gm29544-201ENSMUST00000188860 313 ntBASIC4.97□□□□□ -1.61
Col9a1Q05722 Gm28808-201ENSMUST00000190978 313 ntBASIC4.97□□□□□ -1.61
Col9a1Q05722 Gm46138-201ENSMUST00000215294 426 ntBASIC4.97□□□□□ -1.61
Col9a1Q05722 CT009711.3-201ENSMUST00000225882 250 ntBASIC4.97□□□□□ -1.61
Col9a1Q05722 Zfp871-201ENSMUST00000057501 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
Col9a1Q05722 Gm44901-201ENSMUST00000208157 3977 ntBASIC4.97□□□□□ -1.61
Col9a1Q05722 Xpo7-203ENSMUST00000226448 3663 ntBASIC4.97□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 191.9 ms