Protein–RNA interactions for Protein: Q04857

Col6a1, Collagen alpha-1(VI) chain, mousemouse

Predictions only

Length 1,025 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1Q04857 Gm20534-201ENSMUST00000172957 172 ntBASIC4.55□□□□□ -1.68
Col6a1Q04857 Gm25235-201ENSMUST00000179933 107 ntBASIC4.55□□□□□ -1.68
Col6a1Q04857 Gm27540-201ENSMUST00000184950 187 ntBASIC4.55□□□□□ -1.68
Col6a1Q04857 Sprr2h-202ENSMUST00000191886 297 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Col6a1Q04857 Gm44376-201ENSMUST00000197570 128 ntBASIC4.55□□□□□ -1.68
Col6a1Q04857 Gm44473-201ENSMUST00000204039 152 ntBASIC4.55□□□□□ -1.68
Col6a1Q04857 Gm45533-201ENSMUST00000210295 165 ntTSL 5 BASIC4.55□□□□□ -1.68
Col6a1Q04857 Gm5899-201ENSMUST00000071770 270 ntBASIC4.55□□□□□ -1.68
Col6a1Q04857 Snord14e-201ENSMUST00000082857 90 ntBASIC4.55□□□□□ -1.68
Col6a1Q04857 Ank2-208ENSMUST00000182078 14305 ntAPPRIS P2 TSL 5 BASIC4.55□□□□□ -1.68
Col6a1Q04857 Fam111a-201ENSMUST00000025595 3267 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
Col6a1Q04857 Gm42927-201ENSMUST00000200624 3841 ntBASIC4.55□□□□□ -1.68
Col6a1Q04857 Nlrp4f-201ENSMUST00000037372 3527 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Col6a1Q04857 Gm3055-202ENSMUST00000218939 4067 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Col6a1Q04857 Zfp781-202ENSMUST00000219144 4067 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Col6a1Q04857 Cfh-206ENSMUST00000192880 3746 ntTSL 5 BASIC4.55□□□□□ -1.68
Col6a1Q04857 Efhc2-201ENSMUST00000026014 2554 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Col6a1Q04857 Gm2093-201ENSMUST00000180518 3526 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Col6a1Q04857 Gm8300-201ENSMUST00000110152 1873 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Col6a1Q04857 C030005K15Rik-201ENSMUST00000166373 1882 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Col6a1Q04857 Gm14910-201ENSMUST00000121037 1805 ntBASIC4.54□□□□□ -1.68
Col6a1Q04857 Gm12417-201ENSMUST00000119153 403 ntBASIC4.54□□□□□ -1.68
Col6a1Q04857 Gm3788-201ENSMUST00000119949 136 ntBASIC4.54□□□□□ -1.68
Col6a1Q04857 Gm11195-201ENSMUST00000135030 441 ntTSL 3 BASIC4.54□□□□□ -1.68
Col6a1Q04857 Gm27510-201ENSMUST00000158214 64 ntBASIC4.54□□□□□ -1.68
Col6a1Q04857 Ear-ps8-201ENSMUST00000161935 354 ntBASIC4.54□□□□□ -1.68
Col6a1Q04857 Vmn1r-ps83-201ENSMUST00000172677 705 ntBASIC4.54□□□□□ -1.68
Col6a1Q04857 Gm20257-202ENSMUST00000188643 130 ntBASIC4.54□□□□□ -1.68
Col6a1Q04857 Gm29926-201ENSMUST00000201443 660 ntTSL 3 BASIC4.54□□□□□ -1.68
Col6a1Q04857 Gm45315-201ENSMUST00000209283 333 ntBASIC4.54□□□□□ -1.68
Col6a1Q04857 Gm17829-201ENSMUST00000219782 344 ntBASIC4.54□□□□□ -1.68
Col6a1Q04857 AC138401.1-201ENSMUST00000221533 116 ntBASIC4.54□□□□□ -1.68
Col6a1Q04857 CT954323.1-201ENSMUST00000222774 229 ntBASIC4.54□□□□□ -1.68
Col6a1Q04857 CT485612.4-201ENSMUST00000223405 250 ntBASIC4.54□□□□□ -1.68
Col6a1Q04857 AC150560.2-201ENSMUST00000227208 171 ntBASIC4.54□□□□□ -1.68
Col6a1Q04857 Defb40-201ENSMUST00000066258 389 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Col6a1Q04857 Gm22744-201ENSMUST00000083444 65 ntBASIC4.54□□□□□ -1.68
Col6a1Q04857 Defa25-201ENSMUST00000095425 279 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Col6a1Q04857 Dnah7c-204ENSMUST00000189749 12207 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Col6a1Q04857 Olfr247-202ENSMUST00000215871 1983 ntAPPRIS P5 TSL 5 BASIC4.54□□□□□ -1.68
Col6a1Q04857 Arhgap5-202ENSMUST00000217820 2332 ntTSL 5 BASIC4.54□□□□□ -1.68
Col6a1Q04857 AC158921.1-201ENSMUST00000227861 3468 ntBASIC4.53□□□□□ -1.68
Col6a1Q04857 Vmn2r38-201ENSMUST00000108554 3663 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Col6a1Q04857 Olfr769-202ENSMUST00000215453 4143 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Col6a1Q04857 Gm45804-201ENSMUST00000212137 3435 ntBASIC4.53□□□□□ -1.68
Col6a1Q04857 Nae1-201ENSMUST00000034349 1808 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Col6a1Q04857 Neb-202ENSMUST00000036934 22489 ntAPPRIS P2 TSL 5 BASIC4.53□□□□□ -1.68
Col6a1Q04857 Slfn10-ps-201ENSMUST00000100716 3621 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Col6a1Q04857 Olfr1097-201ENSMUST00000111576 4705 ntAPPRIS P1 TSL 3 BASIC4.53□□□□□ -1.68
Col6a1Q04857 Vmn2r7-202ENSMUST00000161972 3583 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
Col6a1Q04857 Olfr919-202ENSMUST00000215612 1992 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
Col6a1Q04857 Agtr2-201ENSMUST00000089188 3283 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Col6a1Q04857 Vmn2r-ps83-201ENSMUST00000173787 2368 ntBASIC4.53□□□□□ -1.68
Col6a1Q04857 Cylc1-201ENSMUST00000101282 1923 ntAPPRIS P2 TSL 1 (best) BASIC4.53□□□□□ -1.68
Col6a1Q04857 Gm22590-201ENSMUST00000104247 128 ntBASIC4.53□□□□□ -1.68
Col6a1Q04857 Gm11115-201ENSMUST00000113255 54 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Col6a1Q04857 Gm15268-201ENSMUST00000118845 352 ntBASIC4.53□□□□□ -1.68
Col6a1Q04857 Gm13687-201ENSMUST00000119857 282 ntBASIC4.53□□□□□ -1.68
Col6a1Q04857 Gm11398-201ENSMUST00000120330 320 ntBASIC4.53□□□□□ -1.68
Col6a1Q04857 Rpl23a-ps13-201ENSMUST00000120350 441 ntBASIC4.53□□□□□ -1.68
Col6a1Q04857 Gm13424-201ENSMUST00000122301 354 ntBASIC4.53□□□□□ -1.68
Col6a1Q04857 Gm22314-201ENSMUST00000158007 281 ntBASIC4.53□□□□□ -1.68
Col6a1Q04857 Mir7578-201ENSMUST00000183455 82 ntBASIC4.53□□□□□ -1.68
Col6a1Q04857 Gm9379-201ENSMUST00000196790 646 ntBASIC4.53□□□□□ -1.68
Col6a1Q04857 Gm42451-201ENSMUST00000197410 244 ntBASIC4.53□□□□□ -1.68
Col6a1Q04857 Gm44881-201ENSMUST00000205425 367 ntBASIC4.53□□□□□ -1.68
Col6a1Q04857 Olfr1285-201ENSMUST00000208523 903 ntBASIC4.53□□□□□ -1.68
Col6a1Q04857 Gm45553-201ENSMUST00000209929 507 ntBASIC4.53□□□□□ -1.68
Col6a1Q04857 Fth-ps3-201ENSMUST00000210405 358 ntBASIC4.53□□□□□ -1.68
Col6a1Q04857 Olfr542-ps1-201ENSMUST00000211706 831 ntBASIC4.53□□□□□ -1.68
Col6a1Q04857 AC154374.1-201ENSMUST00000215351 351 ntBASIC4.53□□□□□ -1.68
Col6a1Q04857 AC134254.5-201ENSMUST00000223436 400 ntBASIC4.53□□□□□ -1.68
Col6a1Q04857 Lelp1-201ENSMUST00000029535 857 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Col6a1Q04857 Gm23925-201ENSMUST00000082471 132 ntBASIC4.53□□□□□ -1.68
Col6a1Q04857 Gm24147-201ENSMUST00000082763 144 ntBASIC4.53□□□□□ -1.68
Col6a1Q04857 Gm23650-201ENSMUST00000083355 70 ntBASIC4.53□□□□□ -1.68
Col6a1Q04857 Gm45557-201ENSMUST00000210004 1651 ntBASIC4.53□□□□□ -1.68
Col6a1Q04857 Macf1-201ENSMUST00000082108 17331 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Col6a1Q04857 Atp1b4-201ENSMUST00000016471 4201 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Col6a1Q04857 Vmn1r43-203ENSMUST00000226741 12542 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Col6a1Q04857 Gm45517-201ENSMUST00000209973 2468 ntBASIC4.52□□□□□ -1.69
Col6a1Q04857 Cdh19-201ENSMUST00000094626 3914 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Col6a1Q04857 Gm5724-201ENSMUST00000148411 2449 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Col6a1Q04857 Olfr913-201ENSMUST00000081095 2441 ntAPPRIS P1 TSL 3 BASIC4.52□□□□□ -1.69
Col6a1Q04857 Fam205c-202ENSMUST00000107978 1451 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
Col6a1Q04857 Vmn1r69-201ENSMUST00000163658 2558 ntAPPRIS P2 BASIC4.52□□□□□ -1.69
Col6a1Q04857 Mir19b-1-201ENSMUST00000102301 87 ntBASIC4.52□□□□□ -1.69
Col6a1Q04857 Igkv17-121-201ENSMUST00000103315 350 ntAPPRIS ALT2 BASIC4.52□□□□□ -1.69
Col6a1Q04857 Igkv1-110-201ENSMUST00000103321 401 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Col6a1Q04857 Gm25376-201ENSMUST00000104340 133 ntBASIC4.52□□□□□ -1.69
Col6a1Q04857 Rpl31-ps6-201ENSMUST00000119959 378 ntBASIC4.52□□□□□ -1.69
Col6a1Q04857 Gm24629-201ENSMUST00000122762 89 ntBASIC4.52□□□□□ -1.69
Col6a1Q04857 Gm5958-201ENSMUST00000147698 297 ntBASIC4.52□□□□□ -1.69
Col6a1Q04857 Vmn2r-ps20-201ENSMUST00000179853 382 ntBASIC4.52□□□□□ -1.69
Col6a1Q04857 Gm28118-201ENSMUST00000185957 294 ntBASIC4.52□□□□□ -1.69
Col6a1Q04857 Gm43424-201ENSMUST00000200484 253 ntBASIC4.52□□□□□ -1.69
Col6a1Q04857 AC121898.1-201ENSMUST00000227599 288 ntBASIC4.52□□□□□ -1.69
Col6a1Q04857 Snord21-201ENSMUST00000082519 94 ntBASIC4.52□□□□□ -1.69
Col6a1Q04857 Mir34b-201ENSMUST00000083558 84 ntBASIC4.52□□□□□ -1.69
Col6a1Q04857 Mir504-201ENSMUST00000093602 79 ntBASIC4.52□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 94.4 ms